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The map label for this gene is yafK [H]

Identifier: 13473087

GI number: 13473087

Start: 2882689

End: 2883876

Strand: Direct

Name: yafK [H]

Synonym: mlr3577

Alternate gene names: 13473087

Gene position: 2882689-2883876 (Clockwise)

Preceding gene: 13473086

Following gene: 13473088

Centisome position: 40.97

GC content: 64.39

Gene sequence:

>1188_bases
ATGGTGCGCACCTCCTCGGTGATGGCGCGCATCTTCAAGGAAGAGGGCAAGCTCGAGATCTGGAAGGCCAAGACCAACGG
CCGCTACGACATGGTGGCGAGCTACGACATCTGCAAATGGTCGGGCAAGCTGGGTCCCAAATACACCGAAGGCGACCGCC
AGGCGCCGGAAGGCTTCTACACGGTCCGCCCGTCGCAGATGAATCCGCGTTCCAACTACCATCTGTCCTTCAACATCGGC
TTTCCCAACGCCTATGACCGCGCCAATGGCCGCACCGGCCAGAACCTGATGGTGCATGGCGCCTGTTCGTCCTCGGGCTG
CTATTCGATGACCGACGCCCAGATCGAGCAGATCTATGCCTTCGGCCGCGACGCCTTCCAGGGTGGGCAAACGGAGTTCC
AGGTCGAAGCCTTTCCGTTCCGCATGACCGCCGCCAATATGGCGCGCTATCGCAACGACCCGAACTACGAGTTCTGGAAG
ATGCTGAAGGTCGGCTACGACAATTTCGAGGTCACCAAGGTGCCGCCGAAGGTCGATGTCTGCGAGAAGCGCTACGTCTT
CAACCAGGTCGCCGCCGACGGCCAGACATTCGATCCGACCGGACCATGCCCGGCAACCACGCAGCCGGATTCGCTGAAGA
GCGCCTATAACGCCTATCAGAGCACCTATGACGCGGCCTTCAACAGCGCGCTCAAGGCAAGCGTGCCGCCACCGAAGCCG
ACCATCGCCGGCGTCAAGGAAGCCAGTATCGTTTCGGACTGGTCGAAGCGCCGCGCGCGCGGCGAGCGCGTGCCGATCGA
TCCGCCCTCGCTCAATTCCGACGGCTCGGTGACCGAGACGGCGCGCATGGGCCGCATCGATTCGCCCGCCGGCCGCAAGA
TGGCGGCACTGGACGCCGAAAAGGCCGCCAAGCAGAAGGCCGAGGAACAGAGGCTGGCCGCCATAGAGGCCGCCAAGCAG
GCCAAGGAGGCCGCAAAGGCGCAGGCGCTGGCCGAAAAGGAAGCGGCCAAGGCGCAAGCCGTGGCGGCAAAGGAAGCGGC
CAAGGCCGCCAAGCAAGCTCCAGTCGCCACCGCCACCATCGCCGCCCCGACGGAGGCGGCGCCGGAAGCCGAAACGCAGG
CAGCGAGCGCTGATGAGAGCCGGGTGACGAAGCTGAAGAACAAGCTGCTCGGCATGTTCGGCGGCTGA

Upstream 100 bases:

>100_bases
AGCCATCGCCGGCTGCAATGATTCGTCGATGAAGGACTTTGCCCCGGAAGCCAACAAGCCGCTGCCGGACAAGATCCTTG
CCGACATGAAGGCCAAGGGC

Downstream 100 bases:

>100_bases
GCTTGGTCTTGGCCGGGGATACCGCTATCTACGACCTGAAAGGGCTGAACTGCCCTTTGCCGGTGCTGAAGGCAAAGAAG
CGGCTGGCGGGAATGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLSFNIG
FPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWK
MLKVGYDNFEVTKVPPKVDVCEKRYVFNQVAADGQTFDPTGPCPATTQPDSLKSAYNAYQSTYDAAFNSALKASVPPPKP
TIAGVKEASIVSDWSKRRARGERVPIDPPSLNSDGSVTETARMGRIDSPAGRKMAALDAEKAAKQKAEEQRLAAIEAAKQ
AKEAAKAQALAEKEAAKAQAVAAKEAAKAAKQAPVATATIAAPTEAAPEAETQAASADESRVTKLKNKLLGMFGG

Sequences:

>Translated_395_residues
MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLSFNIG
FPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWK
MLKVGYDNFEVTKVPPKVDVCEKRYVFNQVAADGQTFDPTGPCPATTQPDSLKSAYNAYQSTYDAAFNSALKASVPPPKP
TIAGVKEASIVSDWSKRRARGERVPIDPPSLNSDGSVTETARMGRIDSPAGRKMAALDAEKAAKQKAEEQRLAAIEAAKQ
AKEAAKAQALAEKEAAKAQAVAAKEAAKAAKQAPVATATIAAPTEAAPEAETQAASADESRVTKLKNKLLGMFGG
>Mature_395_residues
MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLSFNIG
FPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWK
MLKVGYDNFEVTKVPPKVDVCEKRYVFNQVAADGQTFDPTGPCPATTQPDSLKSAYNAYQSTYDAAFNSALKASVPPPKP
TIAGVKEASIVSDWSKRRARGERVPIDPPSLNSDGSVTETARMGRIDSPAGRKMAALDAEKAAKQKAEEQRLAAIEAAKQ
AKEAAKAQALAEKEAAKAQAVAAKEAAKAAKQAPVATATIAAPTEAAPEAETQAASADESRVTKLKNKLLGMFGG

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=182, Percent_Identity=50, Blast_Score=191, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 42927; Mature: 42927

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFY
CCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCEE
TVRPSQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYA
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
FGRDAFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDV
HCHHHHCCCCCEEEEEECCEEHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHH
CEKRYVFNQVAADGQTFDPTGPCPATTQPDSLKSAYNAYQSTYDAAFNSALKASVPPPKP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TIAGVKEASIVSDWSKRRARGERVPIDPPSLNSDGSVTETARMGRIDSPAGRKMAALDAE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHHHHH
KAAKQKAEEQRLAAIEAAKQAKEAAKAQALAEKEAAKAQAVAAKEAAKAAKQAPVATATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AAPTEAAPEAETQAASADESRVTKLKNKLLGMFGG
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFY
CCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCEE
TVRPSQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYA
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
FGRDAFQGGQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVDV
HCHHHHCCCCCEEEEEECCEEHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHH
CEKRYVFNQVAADGQTFDPTGPCPATTQPDSLKSAYNAYQSTYDAAFNSALKASVPPPKP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TIAGVKEASIVSDWSKRRARGERVPIDPPSLNSDGSVTETARMGRIDSPAGRKMAALDAE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEHHHHHH
KAAKQKAEEQRLAAIEAAKQAKEAAKAQALAEKEAAKAQAVAAKEAAKAAKQAPVATATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
AAPTEAAPEAETQAASADESRVTKLKNKLLGMFGG
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]