Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473032

Identifier: 13473032

GI number: 13473032

Start: 2834316

End: 2836922

Strand: Direct

Name: 13473032

Synonym: mlr3512

Alternate gene names: NA

Gene position: 2834316-2836922 (Clockwise)

Preceding gene: 13473031

Following gene: 13473033

Centisome position: 40.28

GC content: 67.59

Gene sequence:

>2607_bases
ATGACGCAACGACCCACCTCTAGCGATCGCGGTCTCGCCGGGCGCCTTGCGCTCAGCCGGCTGGCGACGCGGGTCTCGAT
GATGGTCGAGCGCGGCTGGCCGCTGCTGCTGCCGCTGATCCTTATCGCCTGCCTGTTCCTGAGCATCTCCTGGTTCGGCA
TTTTCTCCCGGTTGCCGGATGTCGCGCGCATCGGCCTTGTCGCCGCATTCGGCCTGGCAGGGCTGGCAGCGCTCTATCCG
CTGCGTTTCTTCCGCCTGCCTGGTGCCGCCGAGGTCGACCGCCGCATCGAGGCCGCCAACGAACTGCTGCACAGCCCCGT
GCTGGTGCAGGCCGACCGGCCAAGCGGCCGTGAAAGCAGTTTCTCGCAGGCGCTGTGGCGCGAACACCAGAAGCGCATGG
CCGCCAGGCTCGACAGGCTTGGCGCCGACCTGCCGCGCACCCGGGTGCCGGAGCGCGATCCTTGGGGGCTGCGCGCCGTG
GCGGCGCTGCTGCTCGTCACCGCCTTTGCCTTCTCCTTCGGGCCGACAGGCGGCAAGATAGCCGACGGCTTCAGCGCCCA
CGGCGCGCACGATGCCTTGCCGCCACGCATCGATGCCTGGGTGACGCCGCCCGCCTATACCGGCAAACCGCCGATCTTCC
TGACCGCCGACGCCAACCAGGCGACGCCGACGTTTCATGTGCCTGAGGGCAGCGACGTCTCCTTGCGCGTCACCGGAGGC
TCGGGCGAGGAAACGCTGGCCTATGCCGACAAGGATGGCAACGCGCGCGTCGTCAACCCTGCCGGACCGCAGGCGGCCAG
CGCCAAGCCAGCCGCAAGCCCGGCGGCGCCGGCCCCCGCATCCCCGTCGAAGGTGCGCCAGTTCACCAGCAAACTGACCG
GCGACGGCACGCTGACGCTGAAATCGGGCGAGGATCAACTCGGCCGATGGGCCTTCGCCGTGATCGCGGACAAACCGCCG
CAGATCCGTTTCGTCGGCGAGCCCAAGCGCGCCGCCAACGGCGCATTCGAGCTCAACTACCAGATCGACGACGATTATGG
CGCCGCCACCGCCAAGGCGGTCTTCACGCTGGCCGACCCGCTGGCACCGGGCGCGCATCCGCTCTACGGCCCACCCGAAA
TGCCGTTGGCGCTGCCGCGCCGCGGCGGCAAGTCCAATGCCGCCAAGACCACCAAGGACCTGACCGAGCATGTCTGGGCC
GGCGGCAGCATCAAGCTGACGCTGGTCGCCACCGATGATGCCGGCCACACCGCGTCCAGCGAAACCAAGACGCTCGTGAT
GCCGGAGCGGCCTTTCGCCAACCCGCTGGCGAGGGCGGTGATCGAACAACGCCGCCTGCTGGCGCTCGACGCCAATGCCA
AGCCTCACGTGCTCGACCTGATAGACGCCATCACGCTGCGGCCGGAAGACACGTTCGACAACATGTCCCACTATCTCGCC
ATCATGAGCGCGCGCAGCCGGCTGAAACTGGCCGGCAACGACGATCAGCTGCGCGGCGAGGTCGCCTATCTCTGGGAAAT
CGCGCTCGGCATCGAGGAGGGCAACCTGTCGGCCGCCGAAAAGCGGCTGCGCCAGGCGCAGCAGGCGCTGCAGGACGCCA
TCAAGAACGGCGCCAGCGACCAGGAAATCGAGAAGGCGATGAAGGAACTGCGCGAGGCGATGAACCAGTTCCTGCAGGAA
TTCGCCGAACGCGCCAAGCAGAACCCGAACGCGCCACAGATGCAGCAGAACGGCCAGGAACTGCGCCAGAGCGACATCGA
CCGGATGATGGACCAGATCGAGAACCTGGCGAAGTCGGGCGACCGCGACAAGGCGCAGCAATTGCTGTCGCAGCTGCAGG
ACATGATGAACAATCTCCAGGCCGGCCGCCAACAGCAAGGCGGCGAGCAGGACAGCCAGATGCGCCAGCAGATGGACAAG
CTCGGCGAGATCCTGCGGCGCCAGCAGGAGATGATGAACGACACCTTCCGCATGGACCAAATGCAGCGCGGCGAGCGCCA
GCGCGGACAGAACCGCGACGAGCAGCTTGGCCAAGGCGGCGGCGAGGACCAGGACAAGCCAGGCGTCGGCGAGGACCGCG
ATCCGCTCGCCAGGCAAAAGCCGATGACGCCGCAGGAATTCTCCGATGCGCTGAAGCAATTGCAGGAAGGCCAGGGCCAG
CTGAAGAGCGATCTCGAGCAGCTGAAGAAGAACCTCGAAGGCATGGGCATGGAGCCCAATGAAGGATTTGGCGAGGCCGG
CAAGTCGATGGGCAGCGCCGAGCAGGCGCTTGGCGAGGGCCAGGGCGACGAGGCCGTCGGCCACCAGGGCCGGGCGCTCG
AGGCGCTGCGCAAGGGCGCCAAGGACATGATGAAGCAGATGCAAGCCATGCAGGGCGACCAGGGCGGCAGCCAGGAGGGC
GGGCGTCAGCAGAATGCCGACCGTGACCCGCTCGGCCGGCCGCGCGCCAGCCAGGGTCCCGATTTCGGCGATTCGGTGAA
GGTCCCCGACGAGATCGACGTCCAACGCGCCCGCCAGATCCTGGAGGCGATCCGCAAGCGGCTCGGCAACGCGCTCAGCC
CCGATATCGAGCGCAGCTATCTCGAACGGCTGCTCGAGCTGAAGTAG

Upstream 100 bases:

>100_bases
GGGCTTCACATTTTCTGAGAGCGCCTCGCCTTTGCCGTGTTTGCTGGTATTCTTCGAGTCGTGAGGATCGGGCTATCCCG
CCTGATTCCAGGAAGGGCCG

Downstream 100 bases:

>100_bases
GATCGCCCCCCGCCCACCCCCTCTCGAACGGTTCCAACACATGCCGAGGCTCGGTACTGTCACGCCCGTCCTGCGCATCT
TCGATGTTGCCAAGGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 868; Mature: 867

Protein sequence:

>868_residues
MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYP
LRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAV
AALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG
SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPP
QIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWA
GGSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA
IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQE
FAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDK
LGEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ
LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEG
GRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK

Sequences:

>Translated_868_residues
MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYP
LRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAV
AALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG
SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPP
QIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWA
GGSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA
IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQE
FAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDK
LGEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ
LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEG
GRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK
>Mature_867_residues
TQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPDVARIGLVAAFGLAGLAALYPL
RFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESSFSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVA
ALLLVTAFAFSFGPTGGKIADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGGS
GEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTLKSGEDQLGRWAFAVIADKPPQ
IRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADPLAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAG
GSIKLTLVATDDAGHTASSETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLAI
MSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASDQEIEKAMKELREAMNQFLQEF
AERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSGDRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKL
GEILRRQQEMMNDTFRMDQMQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQL
KSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGAKDMMKQMQAMQGDQGGSQEGG
RQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQILEAIRKRLGNALSPDIERSYLERLLELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94745; Mature: 94614

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
VARIGLVAAFGLAGLAALYPLRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHH
FSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVAALLLVTAFAFSFGPTGGKI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEECC
SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTL
CCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
KSGEDQLGRWAFAVIADKPPQIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADP
ECCCHHHHHEEEEEEECCCCCEEECCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCC
LAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAGGSIKLTLVATDDAGHTASS
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
ETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA
CCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASD
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
QEIEKAMKELREAMNQFLQEFAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKLGEILRRQQEMMNDTFRMDQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHH
KDMMKQMQAMQGDQGGSQEGGRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LEAIRKRLGNALSPDIERSYLERLLELK
HHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQRPTSSDRGLAGRLALSRLATRVSMMVERGWPLLLPLILIACLFLSISWFGIFSRLPD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
VARIGLVAAFGLAGLAALYPLRFFRLPGAAEVDRRIEAANELLHSPVLVQADRPSGRESS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHH
FSQALWREHQKRMAARLDRLGADLPRTRVPERDPWGLRAVAALLLVTAFAFSFGPTGGKI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ADGFSAHGAHDALPPRIDAWVTPPAYTGKPPIFLTADANQATPTFHVPEGSDVSLRVTGG
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEECC
SGEETLAYADKDGNARVVNPAGPQAASAKPAASPAAPAPASPSKVRQFTSKLTGDGTLTL
CCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
KSGEDQLGRWAFAVIADKPPQIRFVGEPKRAANGAFELNYQIDDDYGAATAKAVFTLADP
ECCCHHHHHEEEEEEECCCCCEEECCCCHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCC
LAPGAHPLYGPPEMPLALPRRGGKSNAAKTTKDLTEHVWAGGSIKLTLVATDDAGHTASS
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
ETKTLVMPERPFANPLARAVIEQRRLLALDANAKPHVLDLIDAITLRPEDTFDNMSHYLA
CCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
IMSARSRLKLAGNDDQLRGEVAYLWEIALGIEEGNLSAAEKRLRQAQQALQDAIKNGASD
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
QEIEKAMKELREAMNQFLQEFAERAKQNPNAPQMQQNGQELRQSDIDRMMDQIENLAKSG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRDKAQQLLSQLQDMMNNLQAGRQQQGGEQDSQMRQQMDKLGEILRRQQEMMNDTFRMDQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQRGERQRGQNRDEQLGQGGGEDQDKPGVGEDRDPLARQKPMTPQEFSDALKQLQEGQGQ
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
LKSDLEQLKKNLEGMGMEPNEGFGEAGKSMGSAEQALGEGQGDEAVGHQGRALEALRKGA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHH
KDMMKQMQAMQGDQGGSQEGGRQQNADRDPLGRPRASQGPDFGDSVKVPDEIDVQRARQI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LEAIRKRLGNALSPDIERSYLERLLELK
HHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA