| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472980
Identifier: 13472980
GI number: 13472980
Start: 2782522
End: 2783430
Strand: Reverse
Name: 13472980
Synonym: mll3447
Alternate gene names: NA
Gene position: 2783430-2782522 (Counterclockwise)
Preceding gene: 13472982
Following gene: 13472978
Centisome position: 39.56
GC content: 67.0
Gene sequence:
>909_bases ATGAAATTTCTCTGGGATTCGGCGTTCGGCCTGCTTGTCGTCACCGGCTGCCTGCTCGGCCTGACACTGCCCTTCGGCAA GCTCGCCACGGCAGCCGGCGTGCCGGCCATGGTCTGGGCCTTCGTCATCTCGCTCGGCGCCGGCGGCGTGCTTTTGTGCG TGCTTTTGCTGCGCGGCCAGCGTGTCCGGCTCACCGCGCACAAGCTGCGCTATTTCTTCGTCACGGCGGCCGTGTCCTAT GCCGTCCCCAATCTCTTGATGTTCTCGGCCATTCCGCATCTGGGCGCCGGCTATACCGGCATCATGTTCACGCTGTCGCC CGTCGTCACGCTGGTGTTCTCGATCCTGCTGCGTGTCCGGCGCCCGAACGTGCTGGGCATTATCGGCATCGCCGTCGGTT TCATCGGCGCCGTGATGGTGGCGGTGACGCGCGGCGAGGCCGGCCAGCCGGCCGATCTGTTCTGGGTGGTGATGGGGCTG CTGATCCCGGTCAGCCTTGCAGCCGGCAACATCTACCGCACCGTCGACTGGCCGGAAAGCACCGGTCCGATCGAGCTCGC CGTCGGCAGCCACCTGGCGTCGGCGACGCTGCTGCTCGCCGGCATTCTCGCTTTGTTCGGCGTCGAGGCCTTCGCGCCGC TAGGCGGCGTACCGCTGGTCCTCGTCGGGCAGGTCGCATCGGCGTCGGCGATGTTTGCCTTCTTCTTCCGGCTGCAGGCG GTCGGCGGCCCGGTCTATCTCAGCCAGATCGGCTATGTGGCAGCCGCGGTCGGCCTGTTTGCCGGCACGATCTTCCTTGG CGAGCACTATCAGCTGCTGACCTGGGCCGGCGCCGCCATCATCACCGCCGGCGTCTTCATCACCACGAAGGCGCAGAGCC AGGCTGTCGCGAAGCCGCAGCCCGCGTAA
Upstream 100 bases:
>100_bases ATCTTGACGTTAAGAATCTTTGCGCTATCTTATCTCAGGATACAGAACCGGCCGAGCGCCGCAAGTGCCAAATTTCGCAA TTGAATGACGGGACCATCCG
Downstream 100 bases:
>100_bases ACGTCGTCAAAGTTTTCCGCCGCCGTCGGCGTCGCCGCCAGGCTCCGGCCTTGGATGCCGGCGGCGGTGTGTGGCGGCGG CCCGCGCCGCCTGTTCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKFLWDSAFGLLVVTGCLLGLTLPFGKLATAAGVPAMVWAFVISLGAGGVLLCVLLLRGQRVRLTAHKLRYFFVTAAVSY AVPNLLMFSAIPHLGAGYTGIMFTLSPVVTLVFSILLRVRRPNVLGIIGIAVGFIGAVMVAVTRGEAGQPADLFWVVMGL LIPVSLAAGNIYRTVDWPESTGPIELAVGSHLASATLLLAGILALFGVEAFAPLGGVPLVLVGQVASASAMFAFFFRLQA VGGPVYLSQIGYVAAAVGLFAGTIFLGEHYQLLTWAGAAIITAGVFITTKAQSQAVAKPQPA
Sequences:
>Translated_302_residues MKFLWDSAFGLLVVTGCLLGLTLPFGKLATAAGVPAMVWAFVISLGAGGVLLCVLLLRGQRVRLTAHKLRYFFVTAAVSY AVPNLLMFSAIPHLGAGYTGIMFTLSPVVTLVFSILLRVRRPNVLGIIGIAVGFIGAVMVAVTRGEAGQPADLFWVVMGL LIPVSLAAGNIYRTVDWPESTGPIELAVGSHLASATLLLAGILALFGVEAFAPLGGVPLVLVGQVASASAMFAFFFRLQA VGGPVYLSQIGYVAAAVGLFAGTIFLGEHYQLLTWAGAAIITAGVFITTKAQSQAVAKPQPA >Mature_302_residues MKFLWDSAFGLLVVTGCLLGLTLPFGKLATAAGVPAMVWAFVISLGAGGVLLCVLLLRGQRVRLTAHKLRYFFVTAAVSY AVPNLLMFSAIPHLGAGYTGIMFTLSPVVTLVFSILLRVRRPNVLGIIGIAVGFIGAVMVAVTRGEAGQPADLFWVVMGL LIPVSLAAGNIYRTVDWPESTGPIELAVGSHLASATLLLAGILALFGVEAFAPLGGVPLVLVGQVASASAMFAFFFRLQA VGGPVYLSQIGYVAAAVGLFAGTIFLGEHYQLLTWAGAAIITAGVFITTKAQSQAVAKPQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31388; Mature: 31388
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLWDSAFGLLVVTGCLLGLTLPFGKLATAAGVPAMVWAFVISLGAGGVLLCVLLLRGQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC RVRLTAHKLRYFFVTAAVSYAVPNLLMFSAIPHLGAGYTGIMFTLSPVVTLVFSILLRVR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPNVLGIIGIAVGFIGAVMVAVTRGEAGQPADLFWVVMGLLIPVSLAAGNIYRTVDWPES CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TGPIELAVGSHLASATLLLAGILALFGVEAFAPLGGVPLVLVGQVASASAMFAFFFRLQA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHH VGGPVYLSQIGYVAAAVGLFAGTIFLGEHYQLLTWAGAAIITAGVFITTKAQSQAVAKPQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCC PA CC >Mature Secondary Structure MKFLWDSAFGLLVVTGCLLGLTLPFGKLATAAGVPAMVWAFVISLGAGGVLLCVLLLRGQ CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCC RVRLTAHKLRYFFVTAAVSYAVPNLLMFSAIPHLGAGYTGIMFTLSPVVTLVFSILLRVR EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPNVLGIIGIAVGFIGAVMVAVTRGEAGQPADLFWVVMGLLIPVSLAAGNIYRTVDWPES CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TGPIELAVGSHLASATLLLAGILALFGVEAFAPLGGVPLVLVGQVASASAMFAFFFRLQA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHH VGGPVYLSQIGYVAAAVGLFAGTIFLGEHYQLLTWAGAAIITAGVFITTKAQSQAVAKPQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA