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The map label for this gene is rutA [H]

Identifier: 13472978

GI number: 13472978

Start: 2780684

End: 2781826

Strand: Reverse

Name: rutA [H]

Synonym: mll3445

Alternate gene names: 13472978

Gene position: 2781826-2780684 (Counterclockwise)

Preceding gene: 13472980

Following gene: 13472977

Centisome position: 39.54

GC content: 63.52

Gene sequence:

>1143_bases
ATGAGGAGAACACCGCCAATGAGCATGCTCGACAAGACCGCGCCTCATGCGCAGCCCTTCTTTCTTGGCACTTTCGCGTC
CAATTGTTCCGGCGGCATGACCGTCACCAAGGTTCCCGAGCGCTGGGCCAGTTCCTGGGACAACAATCTGCGCCTGGCGC
ATCTGCTCGACGAGGCCGGTATCGACTTCATGCTGCCGATCGCGCGCTGGATCGGTTATGGCGGCGAGACGAATTTCCAC
GGCAACGTGCTGGAGACGATCACCTGGGCGGCCGGGCTTCTGGCGCTCACCCGCAACATCACGGTTTTCGCCACCACCCA
TACCGCGGCCAACCATCCCGTGGTCGTCGCCAAGCAACTGGCGACCATCGACCAGATCAGCCGTGGCCGCATCGGCCTCA
ACATCGTCGCCGGCTGGAACAAGCCGGAATATGAGGCGCTCGGTTTGACGCTGCCCGATGACCATGTCACGCGCTACGGC
TATGCCCAGGAATGGTTCGACATTGTCCAGGCGTTGTGGGGGCGCACGGAAGCCTTTGACTGGGACGGCACGTGGTTCAA
GCTCAAGAATGTGCTTGGCGACCCGCGCCCGTCGTCACGGCTGCCGATCCTCAATGCGGCCGGGTCGGAGGAGGGCCGCA
AATTCGCGGTCCGCAACGCCGATTTCCTGTTCACCCCGGCAATCGACCTGGCGCGCTCCAAGGATGAGATCATTGCGCTG
AAGGAGCAGGCGAGGGCCGCCGGCAGCGATGTCGACGTGCTGACCTTTGCCCATGTCGTCTGCCGGCCGACCGAGAAGGA
AGCCACGGACTATCTCGAACATTTCGGCCGCGCCAATGCCGACTGGGCGGCGGTCGACAATCTGGTGCGGCTGCAATTCG
CCCATGCGCAGTCGTTCCCGCATGATCTCTTGGCGCTCATTCGCGACCGCATGGCGGCGGGCCATGGCGGCTTTCCGCTC
ACCGGCACGCCCGAGCAGGTCGCCGACGGGATCACCGCCTTGCACGAGGCAGGTTTTCGCGGCTCGACGCTGTCCTTCGT
CAACTATGTCGAGGAATTCCCCTATTTCCGCGACACCGTGCTACCCATTCTCGAAGAGAGAGGCATCCGCATCGCACCGG
CCGCGATGCAGTCGGCGGCTTAG

Upstream 100 bases:

>100_bases
TCGTTCATCTGCCTGTCCCCTGCCATCAGCATGCGCTGATCCCGGTGATTGCGTCCACATGAATTTATAATAGACTTTCT
ATCATAAATTATAAGCAAAA

Downstream 100 bases:

>100_bases
CAAAGAAGCGAAGAGGCAATGTCCATGACAGAAGCTCAGGTCAGCGTCGCCGACTTCCGCGCCGCCATGCGGCTCATCGT
CGGCAATGTCAGCGTCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRRTPPMSMLDKTAPHAQPFFLGTFASNCSGGMTVTKVPERWASSWDNNLRLAHLLDEAGIDFMLPIARWIGYGGETNFH
GNVLETITWAAGLLALTRNITVFATTHTAANHPVVVAKQLATIDQISRGRIGLNIVAGWNKPEYEALGLTLPDDHVTRYG
YAQEWFDIVQALWGRTEAFDWDGTWFKLKNVLGDPRPSSRLPILNAAGSEEGRKFAVRNADFLFTPAIDLARSKDEIIAL
KEQARAAGSDVDVLTFAHVVCRPTEKEATDYLEHFGRANADWAAVDNLVRLQFAHAQSFPHDLLALIRDRMAAGHGGFPL
TGTPEQVADGITALHEAGFRGSTLSFVNYVEEFPYFRDTVLPILEERGIRIAPAAMQSAA

Sequences:

>Translated_380_residues
MRRTPPMSMLDKTAPHAQPFFLGTFASNCSGGMTVTKVPERWASSWDNNLRLAHLLDEAGIDFMLPIARWIGYGGETNFH
GNVLETITWAAGLLALTRNITVFATTHTAANHPVVVAKQLATIDQISRGRIGLNIVAGWNKPEYEALGLTLPDDHVTRYG
YAQEWFDIVQALWGRTEAFDWDGTWFKLKNVLGDPRPSSRLPILNAAGSEEGRKFAVRNADFLFTPAIDLARSKDEIIAL
KEQARAAGSDVDVLTFAHVVCRPTEKEATDYLEHFGRANADWAAVDNLVRLQFAHAQSFPHDLLALIRDRMAAGHGGFPL
TGTPEQVADGITALHEAGFRGSTLSFVNYVEEFPYFRDTVLPILEERGIRIAPAAMQSAA
>Mature_380_residues
MRRTPPMSMLDKTAPHAQPFFLGTFASNCSGGMTVTKVPERWASSWDNNLRLAHLLDEAGIDFMLPIARWIGYGGETNFH
GNVLETITWAAGLLALTRNITVFATTHTAANHPVVVAKQLATIDQISRGRIGLNIVAGWNKPEYEALGLTLPDDHVTRYG
YAQEWFDIVQALWGRTEAFDWDGTWFKLKNVLGDPRPSSRLPILNAAGSEEGRKFAVRNADFLFTPAIDLARSKDEIIAL
KEQARAAGSDVDVLTFAHVVCRPTEKEATDYLEHFGRANADWAAVDNLVRLQFAHAQSFPHDLLALIRDRMAAGHGGFPL
TGTPEQVADGITALHEAGFRGSTLSFVNYVEEFPYFRDTVLPILEERGIRIAPAAMQSAA

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=352, Percent_Identity=28.4090909090909, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787166, Length=296, Percent_Identity=23.6486486486486, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 41942; Mature: 41942

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTPPMSMLDKTAPHAQPFFLGTFASNCSGGMTVTKVPERWASSWDNNLRLAHLLDEAG
CCCCCCHHHHHCCCCCCCCEEEEEHHCCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCC
IDFMLPIARWIGYGGETNFHGNVLETITWAAGLLALTRNITVFATTHTAANHPVVVAKQL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHH
ATIDQISRGRIGLNIVAGWNKPEYEALGLTLPDDHVTRYGYAQEWFDIVQALWGRTEAFD
HHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC
WDGTWFKLKNVLGDPRPSSRLPILNAAGSEEGRKFAVRNADFLFTPAIDLARSKDEIIAL
CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEECCHHHHCCCHHHHHH
KEQARAAGSDVDVLTFAHVVCRPTEKEATDYLEHFGRANADWAAVDNLVRLQFAHAQSFP
HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCH
HDLLALIRDRMAAGHGGFPLTGTPEQVADGITALHEAGFRGSTLSFVNYVEEFPYFRDTV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
LPILEERGIRIAPAAMQSAA
HHHHHHCCCEEECHHHHCCC
>Mature Secondary Structure
MRRTPPMSMLDKTAPHAQPFFLGTFASNCSGGMTVTKVPERWASSWDNNLRLAHLLDEAG
CCCCCCHHHHHCCCCCCCCEEEEEHHCCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCC
IDFMLPIARWIGYGGETNFHGNVLETITWAAGLLALTRNITVFATTHTAANHPVVVAKQL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHH
ATIDQISRGRIGLNIVAGWNKPEYEALGLTLPDDHVTRYGYAQEWFDIVQALWGRTEAFD
HHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCC
WDGTWFKLKNVLGDPRPSSRLPILNAAGSEEGRKFAVRNADFLFTPAIDLARSKDEIIAL
CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEECCHHHHCCCHHHHHH
KEQARAAGSDVDVLTFAHVVCRPTEKEATDYLEHFGRANADWAAVDNLVRLQFAHAQSFP
HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCH
HDLLALIRDRMAAGHGGFPLTGTPEQVADGITALHEAGFRGSTLSFVNYVEEFPYFRDTV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
LPILEERGIRIAPAAMQSAA
HHHHHHCCCEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA