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The map label for this gene is 13472979

Identifier: 13472979

GI number: 13472979

Start: 2781814

End: 2782515

Strand: Direct

Name: 13472979

Synonym: mlr3446

Alternate gene names: NA

Gene position: 2781814-2782515 (Clockwise)

Preceding gene: 13472976

Following gene: 13472981

Centisome position: 39.54

GC content: 61.11

Gene sequence:

>702_bases
GTGTTCTCCTCATTTTTGCTTATAATTTATGATAGAAAGTCTATTATAAATTCATGTGGACGCAATCACCGGGATCAGCG
CATGCTGATGGCAGGGGACAGGCAGATGAACGAACGGCGCAAATCCTTGGAAACACCGGCCGAACTGCTGGATCGCGGCT
GGCATCTGGCGCGCACGCCGCTGGAGATCGACGTCACCGAAGTCGAGTATGCGCTGATGCGCTCCTACGAGGCGTTCGGT
CACTGGCAGGCTGAATGCCTCGCCACGGTGATTGAGTTTTCCGCCAGCGGACCCGAGAACGCGCTGCTCCACATCATCCG
CATGAACGACCGGCCGAAAAGCGTGCGCGATCTTGCCCAGATGACCAACCGCGACGACATCCCCAACATTCAGTACAGCC
TGCGCAAATTGCTGAAGGGCGGTTTGATCACCCGCACCGGGAGCGGCAGGGCCGGCGTCACTTATGAGGTGACGCCGCTC
GGGCATCGCGTGACCGAGCGCTATGCCGACATCCGCTCCGTCCTGCTCATCGATGCCGTGACGCGCATTCCCGAAATGGC
CGACAAGCTCGAAGATGTCGCGCGCACGCTCGAACTGATGACCGGCATCTACGAACAGGCGGCGCGGGCCGCCGCCACAC
ACCGCCGCCGGCATCCAAGGCCGGAGCCTGGCGGCGACGCCGACGGCGGCGGAAAACTTTGA

Upstream 100 bases:

>100_bases
ACCTTGGTGACGGTCATGCCGCCGGAACAATTGGACGCGAAAGTGCCAAGAAAGAAGGGCTGCGCATGAGGCGCGGTCTT
GTCGAGCATGCTCATTGGCG

Downstream 100 bases:

>100_bases
CGACGTTTACGCGGGCTGCGGCTTCGCGACAGCCTGGCTCTGCGCCTTCGTGGTGATGAAGACGCCGGCGGTGATGATGG
CGGCGCCGGCCCAGGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; Transcription Regulator MarR-Type HTH Domain; Transcriptional Regulatory Protein; MarR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MFSSFLLIIYDRKSIINSCGRNHRDQRMLMAGDRQMNERRKSLETPAELLDRGWHLARTPLEIDVTEVEYALMRSYEAFG
HWQAECLATVIEFSASGPENALLHIIRMNDRPKSVRDLAQMTNRDDIPNIQYSLRKLLKGGLITRTGSGRAGVTYEVTPL
GHRVTERYADIRSVLLIDAVTRIPEMADKLEDVARTLELMTGIYEQAARAAATHRRRHPRPEPGGDADGGGKL

Sequences:

>Translated_233_residues
MFSSFLLIIYDRKSIINSCGRNHRDQRMLMAGDRQMNERRKSLETPAELLDRGWHLARTPLEIDVTEVEYALMRSYEAFG
HWQAECLATVIEFSASGPENALLHIIRMNDRPKSVRDLAQMTNRDDIPNIQYSLRKLLKGGLITRTGSGRAGVTYEVTPL
GHRVTERYADIRSVLLIDAVTRIPEMADKLEDVARTLELMTGIYEQAARAAATHRRRHPRPEPGGDADGGGKL
>Mature_233_residues
MFSSFLLIIYDRKSIINSCGRNHRDQRMLMAGDRQMNERRKSLETPAELLDRGWHLARTPLEIDVTEVEYALMRSYEAFG
HWQAECLATVIEFSASGPENALLHIIRMNDRPKSVRDLAQMTNRDDIPNIQYSLRKLLKGGLITRTGSGRAGVTYEVTPL
GHRVTERYADIRSVLLIDAVTRIPEMADKLEDVARTLELMTGIYEQAARAAATHRRRHPRPEPGGDADGGGKL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26371; Mature: 26371

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSFLLIIYDRKSIINSCGRNHRDQRMLMAGDRQMNERRKSLETPAELLDRGWHLARTP
CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCC
LEIDVTEVEYALMRSYEAFGHWQAECLATVIEFSASGPENALLHIIRMNDRPKSVRDLAQ
CEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCHHHHHHHH
MTNRDDIPNIQYSLRKLLKGGLITRTGSGRAGVTYEVTPLGHRVTERYADIRSVLLIDAV
HHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TRIPEMADKLEDVARTLELMTGIYEQAARAAATHRRRHPRPEPGGDADGGGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSSFLLIIYDRKSIINSCGRNHRDQRMLMAGDRQMNERRKSLETPAELLDRGWHLARTP
CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEECCC
LEIDVTEVEYALMRSYEAFGHWQAECLATVIEFSASGPENALLHIIRMNDRPKSVRDLAQ
CEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCHHHHHHHH
MTNRDDIPNIQYSLRKLLKGGLITRTGSGRAGVTYEVTPLGHRVTERYADIRSVLLIDAV
HHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
TRIPEMADKLEDVARTLELMTGIYEQAARAAATHRRRHPRPEPGGDADGGGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA