| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472955
Identifier: 13472955
GI number: 13472955
Start: 2742247
End: 2743062
Strand: Direct
Name: 13472955
Synonym: mlr3415
Alternate gene names: NA
Gene position: 2742247-2743062 (Clockwise)
Preceding gene: 13472953
Following gene: 13472958
Centisome position: 38.97
GC content: 65.81
Gene sequence:
>816_bases ATGGAGACCGCAATGCACGTCGTGACGTTGCTGAAGGCTGATATGTTCGACGTCGAGATCGACGGCAAACCCGCCTCGAT CGCGCAGGCCTTGCCGGACTGGAACCCGCATGACCGCTTCGGCCTGGTGATCGACGAAGCGCTTGGCGGCATCGGCGCCA CCCATCTGCTGCAGATCGCCATCACCTCCTTCTATGACGTCAAGCCGAGCCGCCGCACGCAGCTGACGGTCTATCCCGAA ATCTATGCCTTCCACATCGGCAAGGGTTACGGCGCGCATGCGCCCTACGATTTCTGGCCGGCCCGGCGCGAGGTCATCAC CTCGCTCGACCATCGCGAGGTGCTCGACGCCATCAACGATCGCGGCATCACAAGGCTGGCCGTTCCCGATCGCGCGCCGC GCGAGGTCGTGCATCGGCCGAAGGAGGTCGATGCCGCACTCGACCGCATCGCCTCGGCCTTCGTCTACAGCCCGTCGGGC CGGGTAGCGGATCCCGACCTTGTCATTTCAGGCAACGACAGGCGAACCGAATACAATCCCAACAGCGCCTTGCGGCCGCG CTACAGCGACAGCCGGCCGGCTTCCGTTTCGACGGCGGCCAAGCCGGTCAAGGAACTCGATTCGTCCTACCAGGACTGGC TCCGCAAGCGCGAGCACGATTTGACCGCCGAGGAACGCGCCTTCGTCGAGCGCCGTCGCCAGGAGCTGAGACAGGACGGC CTCGTCACCGAAACCTATCGGCGCGTCGGCGTCCGCGAGGCCCTGATGCGGCTGGCGTCTGCCGGCCTCGATCGAGACAC GGCCGCCGCCGGTTGA
Upstream 100 bases:
>100_bases CGGCTGGGCTGCCCCGATTCGAACGGTTGAAGCGGGATGCCGGGCTGACAGGCGGAAGCGCTGCTGATTTGATGACGTTT CGACGAATCGGCGCAAGACG
Downstream 100 bases:
>100_bases TCAATAGCCGACGGTAAAACGCTGCCTGATGTGGGCAGGCTTCTCGATCTCGTCGACCATGACGATGGCGTAGTCCTCGA AGGAGATGCTGCTACCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues METAMHVVTLLKADMFDVEIDGKPASIAQALPDWNPHDRFGLVIDEALGGIGATHLLQIAITSFYDVKPSRRTQLTVYPE IYAFHIGKGYGAHAPYDFWPARREVITSLDHREVLDAINDRGITRLAVPDRAPREVVHRPKEVDAALDRIASAFVYSPSG RVADPDLVISGNDRRTEYNPNSALRPRYSDSRPASVSTAAKPVKELDSSYQDWLRKREHDLTAEERAFVERRRQELRQDG LVTETYRRVGVREALMRLASAGLDRDTAAAG
Sequences:
>Translated_271_residues METAMHVVTLLKADMFDVEIDGKPASIAQALPDWNPHDRFGLVIDEALGGIGATHLLQIAITSFYDVKPSRRTQLTVYPE IYAFHIGKGYGAHAPYDFWPARREVITSLDHREVLDAINDRGITRLAVPDRAPREVVHRPKEVDAALDRIASAFVYSPSG RVADPDLVISGNDRRTEYNPNSALRPRYSDSRPASVSTAAKPVKELDSSYQDWLRKREHDLTAEERAFVERRRQELRQDG LVTETYRRVGVREALMRLASAGLDRDTAAAG >Mature_271_residues METAMHVVTLLKADMFDVEIDGKPASIAQALPDWNPHDRFGLVIDEALGGIGATHLLQIAITSFYDVKPSRRTQLTVYPE IYAFHIGKGYGAHAPYDFWPARREVITSLDHREVLDAINDRGITRLAVPDRAPREVVHRPKEVDAALDRIASAFVYSPSG RVADPDLVISGNDRRTEYNPNSALRPRYSDSRPASVSTAAKPVKELDSSYQDWLRKREHDLTAEERAFVERRRQELRQDG LVTETYRRVGVREALMRLASAGLDRDTAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30404; Mature: 30404
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METAMHVVTLLKADMFDVEIDGKPASIAQALPDWNPHDRFGLVIDEALGGIGATHLLQIA CCHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH ITSFYDVKPSRRTQLTVYPEIYAFHIGKGYGAHAPYDFWPARREVITSLDHREVLDAIND HHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHC RGITRLAVPDRAPREVVHRPKEVDAALDRIASAFVYSPSGRVADPDLVISGNDRRTEYNP CCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCC NSALRPRYSDSRPASVSTAAKPVKELDSSYQDWLRKREHDLTAEERAFVERRRQELRQDG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LVTETYRRVGVREALMRLASAGLDRDTAAAG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure METAMHVVTLLKADMFDVEIDGKPASIAQALPDWNPHDRFGLVIDEALGGIGATHLLQIA CCHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH ITSFYDVKPSRRTQLTVYPEIYAFHIGKGYGAHAPYDFWPARREVITSLDHREVLDAIND HHHHHCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHC RGITRLAVPDRAPREVVHRPKEVDAALDRIASAFVYSPSGRVADPDLVISGNDRRTEYNP CCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCC NSALRPRYSDSRPASVSTAAKPVKELDSSYQDWLRKREHDLTAEERAFVERRRQELRQDG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC LVTETYRRVGVREALMRLASAGLDRDTAAAG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA