Click here to switch to the map view.

The map label for this gene is ucpA [C]

Identifier: 13472923

GI number: 13472923

Start: 2709892

End: 2710800

Strand: Reverse

Name: ucpA [C]

Synonym: mll3372

Alternate gene names: 13472923

Gene position: 2710800-2709892 (Counterclockwise)

Preceding gene: 13472925

Following gene: 13472921

Centisome position: 38.53

GC content: 64.25

Gene sequence:

>909_bases
ATGACGTTGCAAGGAAAAGTTGCCCTGGTCGCCGGCGGCACAAGGGGTGCCGGACGCGGCATAGCGGTCGAGCTCGGCGC
TGCCGGCGCCACAGTCTATGTCACGGGGCGGAGCACGCGTGCCCAGCAATCCGAATATGCCCGGCCGGAAACAATCGAGG
AGACGGCGGAACTGGTCACAGCGAACGGTGGCAGCGGCATCGCCGTCCAGGCCGATCATCTCGTGGCCGATGATGTGCGC
GGGCTGATCGAGCGCATCCGCAAGGAACAGGGCCGCCTCGACATACTGGTCAACGACATCTGGGGCGGTGAAAAGCTGTT
CGAATGGGACAAGCCGGTCTGGGAGCACAATCTGGACAATGGCTTGCGTATGCTGCGTCTGGCCATCGACACACATCTGA
TCACCGCACACCATGCGCTGCCGCTGATGATCGAGCAGCCGGGCGGACTGCTGGTGGAAGTCACCGACGGCACCGCTGAA
TACAATGCCGAGCACTACCGCCTGTCGCCCTTCTATGACCTTGCCAAGGTCGCGGTGAACCGGATGGCATGGGCTCACGC
CAAGGATCTTGCGAAGCACGGCGCCACCTCCGTCTCTTTGACGCCAGGCTGGCTGCGGTCGGAGATGATGCTGGAGGCCT
TTGGCGTGCGCGAGGTGAATTGGCGCGATGCCACGGCAAAGGTGCCGCATTTCATTATTTCGGAGACACCGCGCTTCATC
GGCCGTGCCGTTGCTGCGTTGGCGGCGGACACGGACCGCTCGCGCTGGAACGGGCAGTCGCTGTCCAGCGGCGGCCTGGC
GCAGGTCTACGGCTTTACCGATCTCGACGGCTCGCGGCCCGATGCCTGGCGCTATGTGCCGGAGGTTCAGGACGCCGGCA
AACCCGCCGACGCAACGGGGTATCGATAG

Upstream 100 bases:

>100_bases
ATCTTGACATCCTGACATAACCGAATGATCATTTATATATGATGCGCGCGGCGCAAGCCAGCTCGGATTTCATCGATGGT
GCCGTTCTTGGGAGAGTTCA

Downstream 100 bases:

>100_bases
AGCAATCGGGAATCGCCTCAGGCCGAGCGCCCGTCGAAGTCGAAGATCGACAGAGTGGATGGGTCGATGTCGGCGACGCA
GTTGAGGTTGACATAGGCGC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTLQGKVALVAGGTRGAGRGIAVELGAAGATVYVTGRSTRAQQSEYARPETIEETAELVTANGGSGIAVQADHLVADDVR
GLIERIRKEQGRLDILVNDIWGGEKLFEWDKPVWEHNLDNGLRMLRLAIDTHLITAHHALPLMIEQPGGLLVEVTDGTAE
YNAEHYRLSPFYDLAKVAVNRMAWAHAKDLAKHGATSVSLTPGWLRSEMMLEAFGVREVNWRDATAKVPHFIISETPRFI
GRAVAALAADTDRSRWNGQSLSSGGLAQVYGFTDLDGSRPDAWRYVPEVQDAGKPADATGYR

Sequences:

>Translated_302_residues
MTLQGKVALVAGGTRGAGRGIAVELGAAGATVYVTGRSTRAQQSEYARPETIEETAELVTANGGSGIAVQADHLVADDVR
GLIERIRKEQGRLDILVNDIWGGEKLFEWDKPVWEHNLDNGLRMLRLAIDTHLITAHHALPLMIEQPGGLLVEVTDGTAE
YNAEHYRLSPFYDLAKVAVNRMAWAHAKDLAKHGATSVSLTPGWLRSEMMLEAFGVREVNWRDATAKVPHFIISETPRFI
GRAVAALAADTDRSRWNGQSLSSGGLAQVYGFTDLDGSRPDAWRYVPEVQDAGKPADATGYR
>Mature_301_residues
TLQGKVALVAGGTRGAGRGIAVELGAAGATVYVTGRSTRAQQSEYARPETIEETAELVTANGGSGIAVQADHLVADDVRG
LIERIRKEQGRLDILVNDIWGGEKLFEWDKPVWEHNLDNGLRMLRLAIDTHLITAHHALPLMIEQPGGLLVEVTDGTAEY
NAEHYRLSPFYDLAKVAVNRMAWAHAKDLAKHGATSVSLTPGWLRSEMMLEAFGVREVNWRDATAKVPHFIISETPRFIG
RAVAALAADTDRSRWNGQSLSSGGLAQVYGFTDLDGSRPDAWRYVPEVQDAGKPADATGYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI209862901, Length=291, Percent_Identity=32.9896907216495, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI19923983, Length=291, Percent_Identity=32.9896907216495, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17555612, Length=296, Percent_Identity=35.472972972973, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI71997099, Length=296, Percent_Identity=31.7567567567568, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI86565303, Length=295, Percent_Identity=29.4915254237288, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI21355319, Length=268, Percent_Identity=27.2388059701493, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32880; Mature: 32749

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQGKVALVAGGTRGAGRGIAVELGAAGATVYVTGRSTRAQQSEYARPETIEETAELVT
CCCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHEEE
ANGGSGIAVQADHLVADDVRGLIERIRKEQGRLDILVNDIWGGEKLFEWDKPVWEHNLDN
CCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHECCCCCHHHCCCHH
GLRMLRLAIDTHLITAHHALPLMIEQPGGLLVEVTDGTAEYNAEHYRLSPFYDLAKVAVN
HHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHH
RMAWAHAKDLAKHGATSVSLTPGWLRSEMMLEAFGVREVNWRDATAKVPHFIISETPRFI
HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHCCHHHH
GRAVAALAADTDRSRWNGQSLSSGGLAQVYGFTDLDGSRPDAWRYVPEVQDAGKPADATG
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEECCCHHHCCCCCCCCC
YR
CC
>Mature Secondary Structure 
TLQGKVALVAGGTRGAGRGIAVELGAAGATVYVTGRSTRAQQSEYARPETIEETAELVT
CCCCCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHEEE
ANGGSGIAVQADHLVADDVRGLIERIRKEQGRLDILVNDIWGGEKLFEWDKPVWEHNLDN
CCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHECCCCCHHHCCCHH
GLRMLRLAIDTHLITAHHALPLMIEQPGGLLVEVTDGTAEYNAEHYRLSPFYDLAKVAVN
HHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHH
RMAWAHAKDLAKHGATSVSLTPGWLRSEMMLEAFGVREVNWRDATAKVPHFIISETPRFI
HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHCCHHHH
GRAVAALAADTDRSRWNGQSLSSGGLAQVYGFTDLDGSRPDAWRYVPEVQDAGKPADATG
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEECCCHHHCCCCCCCCC
YR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA