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The map label for this gene is ycjR [C]

Identifier: 13472916

GI number: 13472916

Start: 2703828

End: 2704715

Strand: Direct

Name: ycjR [C]

Synonym: mlr3364

Alternate gene names: 13472916

Gene position: 2703828-2704715 (Clockwise)

Preceding gene: 13472912

Following gene: 13472917

Centisome position: 38.43

GC content: 61.94

Gene sequence:

>888_bases
ATGCATCTTTCGACGCACAACTGGATGCGGGCGGAACCGTTGGAGACGACGCTCAAGCGCATTAAGAAGTTCGGCTATGA
GTCGATCGAGATTTCCGGCGAGCCCGAGCAGTACAAGACGAAGGAGACACGGGCGCTGTTGAAGGAGCATGGCATTCGCT
GCTGGGGCGCGGTGACCTTGATGCTGGGCGAACGCAACCTTGCCGCCAAGAACCAGGGCCAGCGCGAGCGCTCGGTGCAA
TATGTCAAGGACGTGCTGACCATGGTCAGCGAGCTCGATGGCGAAATCATCACGCTCGTCCCCGCGACGGTCGGCAAGGT
GGTGCCGGACGGCACGGAGGAAGAGGAATGGAAATGGGTGGTCGACGCGACCCGCGAATGCTTCACCCATGCCAAGAAGG
TCGGCGTCAAGATCGCCGTCGAGCCGCTCAACCGCTTCGAGACCTATCTGTTCAATCGCGGCGCCCAGGCGCTGGCGCTG
GCCGACGCGGTCAGCCCCGAATGCGGCGTCTGCCTCGACGCCTACCACATCCATATGGAGGAATTTAACGTCTACGACGC
CATCCGTAAGGTCGGAAAGCGCCTGTTCGATTTCCATGTCGCCGACAACAACCGCTTCGCCGCCGGCCTCGGCCAGATCG
ACTGGCCGAAGATCGTCGCCACCTTGAAGGAGGTCGGCTATGACGGCGCGCTGACCAATGAATTCGTCGCCCCGGTCGAC
CGCACGCCGGCGGCGCCCTACCCCGAAATGGTCGAGCGCCACCCGGTCGATATCTCGCCTGAGCAGCTGAAGTTCATCCA
GGACCACGGCTCCAGCGTGCTGACCGAGAAATTCTACACCGACCAGATGCGCATCACCGCCGAAACGCTGCTGCCTCTGA
TCAAGTAG

Upstream 100 bases:

>100_bases
GAAAAAAGGCTGGGGATGCCTTGGGGAGGAACCTTTGCGTCGTCTTTCGGCGACGCATGTCGAAGGCAAACGATACGGAC
GAATTTGGGAAGGACAGACC

Downstream 100 bases:

>100_bases
TCGACGACTGTTGGGAATTTGCCCTTTCGCCCTGACCGGCGGCGGGGCTGGGGAAAGACATGCGTATCAAGACCGTCCAA
GCCTGGTGGGTCCGCATCCC

Product: D-tagatose 3-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MHLSTHNWMRAEPLETTLKRIKKFGYESIEISGEPEQYKTKETRALLKEHGIRCWGAVTLMLGERNLAAKNQGQRERSVQ
YVKDVLTMVSELDGEIITLVPATVGKVVPDGTEEEEWKWVVDATRECFTHAKKVGVKIAVEPLNRFETYLFNRGAQALAL
ADAVSPECGVCLDAYHIHMEEFNVYDAIRKVGKRLFDFHVADNNRFAAGLGQIDWPKIVATLKEVGYDGALTNEFVAPVD
RTPAAPYPEMVERHPVDISPEQLKFIQDHGSSVLTEKFYTDQMRITAETLLPLIK

Sequences:

>Translated_295_residues
MHLSTHNWMRAEPLETTLKRIKKFGYESIEISGEPEQYKTKETRALLKEHGIRCWGAVTLMLGERNLAAKNQGQRERSVQ
YVKDVLTMVSELDGEIITLVPATVGKVVPDGTEEEEWKWVVDATRECFTHAKKVGVKIAVEPLNRFETYLFNRGAQALAL
ADAVSPECGVCLDAYHIHMEEFNVYDAIRKVGKRLFDFHVADNNRFAAGLGQIDWPKIVATLKEVGYDGALTNEFVAPVD
RTPAAPYPEMVERHPVDISPEQLKFIQDHGSSVLTEKFYTDQMRITAETLLPLIK
>Mature_295_residues
MHLSTHNWMRAEPLETTLKRIKKFGYESIEISGEPEQYKTKETRALLKEHGIRCWGAVTLMLGERNLAAKNQGQRERSVQ
YVKDVLTMVSELDGEIITLVPATVGKVVPDGTEEEEWKWVVDATRECFTHAKKVGVKIAVEPLNRFETYLFNRGAQALAL
ADAVSPECGVCLDAYHIHMEEFNVYDAIRKVGKRLFDFHVADNNRFAAGLGQIDWPKIVATLKEVGYDGALTNEFVAPVD
RTPAAPYPEMVERHPVDISPEQLKFIQDHGSSVLTEKFYTDQMRITAETLLPLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Escherichia coli, GI87081874, Length=250, Percent_Identity=26.4, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33389; Mature: 33389

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSTHNWMRAEPLETTLKRIKKFGYESIEISGEPEQYKTKETRALLKEHGIRCWGAVTL
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEE
MLGERNLAAKNQGQRERSVQYVKDVLTMVSELDGEIITLVPATVGKVVPDGTEEEEWKWV
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCHHHHHHH
VDATRECFTHAKKVGVKIAVEPLNRFETYLFNRGAQALALADAVSPECGVCLDAYHIHME
HHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHHH
EFNVYDAIRKVGKRLFDFHVADNNRFAAGLGQIDWPKIVATLKEVGYDGALTNEFVAPVD
HHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCC
RTPAAPYPEMVERHPVDISPEQLKFIQDHGSSVLTEKFYTDQMRITAETLLPLIK
CCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEHHHHHHHCC
>Mature Secondary Structure
MHLSTHNWMRAEPLETTLKRIKKFGYESIEISGEPEQYKTKETRALLKEHGIRCWGAVTL
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEE
MLGERNLAAKNQGQRERSVQYVKDVLTMVSELDGEIITLVPATVGKVVPDGTEEEEWKWV
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCHHHHHHH
VDATRECFTHAKKVGVKIAVEPLNRFETYLFNRGAQALALADAVSPECGVCLDAYHIHME
HHHHHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHHHH
EFNVYDAIRKVGKRLFDFHVADNNRFAAGLGQIDWPKIVATLKEVGYDGALTNEFVAPVD
HHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCC
RTPAAPYPEMVERHPVDISPEQLKFIQDHGSSVLTEKFYTDQMRITAETLLPLIK
CCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA