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The map label for this gene is ycnJ [H]

Identifier: 13472887

GI number: 13472887

Start: 2675758

End: 2677371

Strand: Reverse

Name: ycnJ [H]

Synonym: mll3323

Alternate gene names: 13472887

Gene position: 2677371-2675758 (Counterclockwise)

Preceding gene: 13472888

Following gene: 13472886

Centisome position: 38.05

GC content: 68.22

Gene sequence:

>1614_bases
ATGGTCGATACCAACGGCAAGCGCGTCGGTCGGATTGCCGGCGGGCTGCTGGCCGTGCTCATGGCGCTTATGGTCATGGC
CTCGACCAGTCCGGCCGTTGCCCATGCCGCGCTGATCAAGACCGACCCGGCCGACGGTGCCGTCCTGGCGCAGGCTCCGG
CGCAGTTCTCACTGACCTTCAGCGAACCGGTTTCGCCCTTGGTGCTGACGCTGGTGAAGCCCGACGGCACGCCGGTTGCG
CTGACATCCTTTCGGCTCACCGACCAGACGCTCGAGATCGACAATCCGCAGGCGCTCAAATCCGGCACGCATGTGCTGAG
CTGGCGTGTCATTTCCGCCGACGGCCACCCGGTCGGCGGTTCGCTGCTGTTTTCCATCGGTGCGCCGACCGAGCCGCCCG
TCGTGTCCGAAGCCGTCGACTGGCCGCTGCGGTCGTCGATCTGGATCGGCAAGGTCTTTCTCTACATCGGTCTTTTCCTG
GGCGTCGGCGGCGCCTTCGCCCTTGCCTGGCTGGCGGGCAACGGACGCGTCGGTCAGCGTTTTGTCACGGCCGCGATCCT
GTGCGGGCTCGTGGCGGCACCCTTGTCGCTCGGCTTTCAGGGGCTCGATGCGCTCGGAGCGCCGCTCTCCCATCTGGCAC
AGCCGGTGATCTGGCGGACCGGGCTCGGCACCTCCTTCGGCTGGACGGTGCTGGTCGCCCTGACGGCGCTGGGTCTCGCT
TTGCTGTCGCTGGCCGGACCGCGTGTCCTCGCCAGGCCATTGGCGCTCGCCGGCCTGGCTGGCGTCGGCGTCGCGCTTGC
CGCCAGCGGCCACGCCAGCGCGGCCGAACCGCAATGGCTGACGCGGCCGCTGGTGTTCGTGCACGGTATCGGCATTGCCT
TCTGGGCCGGCGCGCTGGTGCCGCTCGGTTTCGCGCTGAAGCGCCAGGCGGCTGGCGCCGTCGCTTTCCTGCGCCGCTTC
TCCTCGGCGATCCTGCCTGTCGTGGCCGTGCTTGCCGCGGCCGGCGTCGTAATCGCCGTCATCCAGGTGCAAACCACCTC
GGCGCTGGTCGGCACCGCCTATGGCCGGCTGCTGTTGGTCAAGCTGGCGCTGCTGGTCTTCCTCTTCACGCTGGCCGCGG
TCAATCGATGGAAACTCACTGCTTCAGCCGAGGCGGGCGCCACGGAGGTGCAGCGCAGGCTCACCCGTTCGATCGGCGTC
GAAATTCTGATCGTGCTGGCGATCTTCGGCGTTGCCGCGGGCTGGCGCTTCACGCCGCCGCCACGGGCTTTGGCGATCGC
GGCGGCGCAGCCGGTCTCGGTCCACATCCACGCGCTGGAGGCGATGGCCGATCTCAGCATCACGCCAGGCCATGCCGGGC
CTGTCGCTGCCTCGATGATCATCATGACCGGTGATTTCGGGCCGCTCGACGCCAAGGAGGTGACGCTGGTGCTGTCGAAG
CCCGATTCAGGCATCGAGCCGCTGAAGCGCGCGGCGACCAAGCCCGGCGACGGCAGCTGGCGTGTCGACAACCTCGTCAT
CCCGGTTCCCGGCCGCTGGACGGTGCGCATCGACATTCTGGTCTCGGATTTCAAGATGGTGAAGATCGAAGCGCCTGTGG
ACATCCGGCCGTAG

Upstream 100 bases:

>100_bases
ATCAAGCTCACACCGAAGAAATAGTTTCTCCCCTGGCGCGCTCCGCTTGCCGGAGCGCGCCGCATCCTCGTGGCATGGCA
TGACCGCAATATCCTCCCGG

Downstream 100 bases:

>100_bases
CCGACAGATGTGAACGTTGTCGAACGTCTGCGCTGTGCAACAGCAACACAATTCGGCGAGGCGGTTGACGCGGCCCGAAA
GGCCCGTCAATCATCCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MVDTNGKRVGRIAGGLLAVLMALMVMASTSPAVAHAALIKTDPADGAVLAQAPAQFSLTFSEPVSPLVLTLVKPDGTPVA
LTSFRLTDQTLEIDNPQALKSGTHVLSWRVISADGHPVGGSLLFSIGAPTEPPVVSEAVDWPLRSSIWIGKVFLYIGLFL
GVGGAFALAWLAGNGRVGQRFVTAAILCGLVAAPLSLGFQGLDALGAPLSHLAQPVIWRTGLGTSFGWTVLVALTALGLA
LLSLAGPRVLARPLALAGLAGVGVALAASGHASAAEPQWLTRPLVFVHGIGIAFWAGALVPLGFALKRQAAGAVAFLRRF
SSAILPVVAVLAAAGVVIAVIQVQTTSALVGTAYGRLLLVKLALLVFLFTLAAVNRWKLTASAEAGATEVQRRLTRSIGV
EILIVLAIFGVAAGWRFTPPPRALAIAAAQPVSVHIHALEAMADLSITPGHAGPVAASMIIMTGDFGPLDAKEVTLVLSK
PDSGIEPLKRAATKPGDGSWRVDNLVIPVPGRWTVRIDILVSDFKMVKIEAPVDIRP

Sequences:

>Translated_537_residues
MVDTNGKRVGRIAGGLLAVLMALMVMASTSPAVAHAALIKTDPADGAVLAQAPAQFSLTFSEPVSPLVLTLVKPDGTPVA
LTSFRLTDQTLEIDNPQALKSGTHVLSWRVISADGHPVGGSLLFSIGAPTEPPVVSEAVDWPLRSSIWIGKVFLYIGLFL
GVGGAFALAWLAGNGRVGQRFVTAAILCGLVAAPLSLGFQGLDALGAPLSHLAQPVIWRTGLGTSFGWTVLVALTALGLA
LLSLAGPRVLARPLALAGLAGVGVALAASGHASAAEPQWLTRPLVFVHGIGIAFWAGALVPLGFALKRQAAGAVAFLRRF
SSAILPVVAVLAAAGVVIAVIQVQTTSALVGTAYGRLLLVKLALLVFLFTLAAVNRWKLTASAEAGATEVQRRLTRSIGV
EILIVLAIFGVAAGWRFTPPPRALAIAAAQPVSVHIHALEAMADLSITPGHAGPVAASMIIMTGDFGPLDAKEVTLVLSK
PDSGIEPLKRAATKPGDGSWRVDNLVIPVPGRWTVRIDILVSDFKMVKIEAPVDIRP
>Mature_537_residues
MVDTNGKRVGRIAGGLLAVLMALMVMASTSPAVAHAALIKTDPADGAVLAQAPAQFSLTFSEPVSPLVLTLVKPDGTPVA
LTSFRLTDQTLEIDNPQALKSGTHVLSWRVISADGHPVGGSLLFSIGAPTEPPVVSEAVDWPLRSSIWIGKVFLYIGLFL
GVGGAFALAWLAGNGRVGQRFVTAAILCGLVAAPLSLGFQGLDALGAPLSHLAQPVIWRTGLGTSFGWTVLVALTALGLA
LLSLAGPRVLARPLALAGLAGVGVALAASGHASAAEPQWLTRPLVFVHGIGIAFWAGALVPLGFALKRQAAGAVAFLRRF
SSAILPVVAVLAAAGVVIAVIQVQTTSALVGTAYGRLLLVKLALLVFLFTLAAVNRWKLTASAEAGATEVQRRLTRSIGV
EILIVLAIFGVAAGWRFTPPPRALAIAAAQPVSVHIHALEAMADLSITPGHAGPVAASMIIMTGDFGPLDAKEVTLVLSK
PDSGIEPLKRAATKPGDGSWRVDNLVIPVPGRWTVRIDILVSDFKMVKIEAPVDIRP

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 55541; Mature: 55541

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTNGKRVGRIAGGLLAVLMALMVMASTSPAVAHAALIKTDPADGAVLAQAPAQFSLTF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEEEECCCEEEEEE
SEPVSPLVLTLVKPDGTPVALTSFRLTDQTLEIDNPQALKSGTHVLSWRVISADGHPVGG
CCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCHHHHCCCEEEEEEEEECCCCCCCC
SLLFSIGAPTEPPVVSEAVDWPLRSSIWIGKVFLYIGLFLGVGGAFALAWLAGNGRVGQR
EEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHH
FVTAAILCGLVAAPLSLGFQGLDALGAPLSHLAQPVIWRTGLGTSFGWTVLVALTALGLA
HHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHH
LLSLAGPRVLARPLALAGLAGVGVALAASGHASAAEPQWLTRPLVFVHGIGIAFWAGALV
HHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLGFALKRQAAGAVAFLRRFSSAILPVVAVLAAAGVVIAVIQVQTTSALVGTAYGRLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHH
KLALLVFLFTLAAVNRWKLTASAEAGATEVQRRLTRSIGVEILIVLAIFGVAAGWRFTPP
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRALAIAAAQPVSVHIHALEAMADLSITPGHAGPVAASMIIMTGDFGPLDAKEVTLVLSK
CCCEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCHHEEEEEEECCCCCCCCCEEEEEEEC
PDSGIEPLKRAATKPGDGSWRVDNLVIPVPGRWTVRIDILVSDFKMVKIEAPVDIRP
CCCCHHHHHHHCCCCCCCCEEECEEEEECCCCEEEEEEEEEECEEEEEEECCCCCCC
>Mature Secondary Structure
MVDTNGKRVGRIAGGLLAVLMALMVMASTSPAVAHAALIKTDPADGAVLAQAPAQFSLTF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEEEECCCEEEEEE
SEPVSPLVLTLVKPDGTPVALTSFRLTDQTLEIDNPQALKSGTHVLSWRVISADGHPVGG
CCCCCCEEEEEECCCCCCEEEEEEEEECCEEECCCCHHHHCCCEEEEEEEEECCCCCCCC
SLLFSIGAPTEPPVVSEAVDWPLRSSIWIGKVFLYIGLFLGVGGAFALAWLAGNGRVGQR
EEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHH
FVTAAILCGLVAAPLSLGFQGLDALGAPLSHLAQPVIWRTGLGTSFGWTVLVALTALGLA
HHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHH
LLSLAGPRVLARPLALAGLAGVGVALAASGHASAAEPQWLTRPLVFVHGIGIAFWAGALV
HHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLGFALKRQAAGAVAFLRRFSSAILPVVAVLAAAGVVIAVIQVQTTSALVGTAYGRLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHH
KLALLVFLFTLAAVNRWKLTASAEAGATEVQRRLTRSIGVEILIVLAIFGVAAGWRFTPP
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRALAIAAAQPVSVHIHALEAMADLSITPGHAGPVAASMIIMTGDFGPLDAKEVTLVLSK
CCCEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCHHEEEEEEECCCCCCCCCEEEEEEEC
PDSGIEPLKRAATKPGDGSWRVDNLVIPVPGRWTVRIDILVSDFKMVKIEAPVDIRP
CCCCHHHHHHHCCCCCCCCEEECEEEEECCCCEEEEEEEEEECEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]