| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gntZ [H]
Identifier: 13472886
GI number: 13472886
Start: 2674166
End: 2675593
Strand: Reverse
Name: gntZ [H]
Synonym: mll3321
Alternate gene names: 13472886
Gene position: 2675593-2674166 (Counterclockwise)
Preceding gene: 13472887
Following gene: 13472884
Centisome position: 38.03
GC content: 64.57
Gene sequence:
>1428_bases ATGGAAAAAGCCGAAATCGGCCTGATCGGCCTTGGCACGATGGGCTCCAACCTGGCGCTGAACATCGCCGAACACGGACA CCGCATCGCCGTCTTCAATCGCACCAGGGCACGTACCGACGCTTTCGTCGAGAATGCCGGCGCGCTGAAGGACATGGTGG TGCCCTGCTACAGCCTGGAAGAACTTGCCGCCGCGATCCGGCCGCCGCGCCCGATCATCATCATGGTGCTGGCCGGCAAG CCGGTCGATGAGCAGATCGAAGCCTTGCGTGGCGTGCTGTCCGGCAACGACATCGTCATCGATGCCGGCAACGCCAATTT CCGCGATACGATGCGGCGCTTCTCCGAACTGTCCGGTTCCGGGCTGACCTTCATCGGCATGGGCGTGTCCGGCGGCGAGG AGGGCGCGCGCCATGGTCCGTCGATCATGGTCGGCGGCACGGAGGATTCGTGGAAGCGGGTCGAGAAAGTGCTGACCGCC ATCTCCGCCAAGTTCAAGGACGAGCCCTGTGCCGCCTGGCTCGGCACCGATGGCGCCGGGCATTTCGTCAAGACCATCCA CAACGGCATCGAATATGCCGACATGCAGATGATTGCCGAGATCTACGGCATCCTGCGTGATGGGCTCGGCATGGGGCCGA AGGACATCGGCACGGTGTTCTCCAACTGGAACAAGGGCCGGCTCAACTCCTACCTGATCGAGATCACCGCCAAGGTGCTG GCCGCCGACGATCCCAAGACCGGCAAGCCGGTGGTCGACATTATCCTCGACCGCGCCGGCCAGAAGGGCACCGGCAAATG GTCCGTCATCGAGGCGCAGCAGCTCGGCATTCCGGCGACAGCGATCGAGGCGGCCGTGGCGGCCCGCGTGCTGTCGTCGA TCAAGGACGAGCGGCTGGCGGCCGAGAAAGCCTACGGTAACATCGGGGTATCGAAGATTTCCGGCGACAAGGATGCGCTG CTGAAAGATCTCGAACTGGCGCTGTTCGCCGGCAAGATCGCGGCCTATGCGCAGGGCTTCGCGGTGATGAGCGGCGCCTC GAAGGAGTTCAACTGGAACCTGCCGATGCCGACCATCGCCCGGATCTGGCGCGCCGGCTGCATCATCCGCTCGCAGATGC TGGATACGATGGCCGAGGCCTTCAGCAGCGGCGGCGCTTCGACCAATCTTTTGATGGCGCCGGCTTTCATCAGCTTGATG CAGGAAGCGCATCCGTCGCTGCGGCGCATCGTGGCAAAGGCTTCCGAGGCCGGCGCGCCGGTGCCGGCGCTGTCTTCGGC ACTTGCCTATTTCGACAGCTATCGCCAGGGCCGCGGCACTTCGAACCTGATCCAGGCACAGCGCGACTTCTTCGGCGCGC ATGGCTTCGAACGCATCGACGAGCAGGGTGCCTTCCACGGCCCGTGGGGCAGCGGCGCCGCCGGTTAG
Upstream 100 bases:
>100_bases TTGACGCGGCCCGAAAGGCCCGTCAATCATCCCGGGAAGAACGGGCATCCGGTAAAATCGCGGGCTCCAACCAACAAGAT CCGAAAGCAGGGAAGAAACG
Downstream 100 bases:
>100_bases TCCGTGGAGCGCTGGTAGGCCAGGACCTCGCCCGGCACGCTGAGACTTTGCAGCGAGCCGGGTGCGGCGCCGCCGATCCA GCCGAGCACGGAGCGGGCGA
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MEKAEIGLIGLGTMGSNLALNIAEHGHRIAVFNRTRARTDAFVENAGALKDMVVPCYSLEELAAAIRPPRPIIIMVLAGK PVDEQIEALRGVLSGNDIVIDAGNANFRDTMRRFSELSGSGLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTA ISAKFKDEPCAAWLGTDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGMGPKDIGTVFSNWNKGRLNSYLIEITAKVL AADDPKTGKPVVDIILDRAGQKGTGKWSVIEAQQLGIPATAIEAAVAARVLSSIKDERLAAEKAYGNIGVSKISGDKDAL LKDLELALFAGKIAAYAQGFAVMSGASKEFNWNLPMPTIARIWRAGCIIRSQMLDTMAEAFSSGGASTNLLMAPAFISLM QEAHPSLRRIVAKASEAGAPVPALSSALAYFDSYRQGRGTSNLIQAQRDFFGAHGFERIDEQGAFHGPWGSGAAG
Sequences:
>Translated_475_residues MEKAEIGLIGLGTMGSNLALNIAEHGHRIAVFNRTRARTDAFVENAGALKDMVVPCYSLEELAAAIRPPRPIIIMVLAGK PVDEQIEALRGVLSGNDIVIDAGNANFRDTMRRFSELSGSGLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTA ISAKFKDEPCAAWLGTDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGMGPKDIGTVFSNWNKGRLNSYLIEITAKVL AADDPKTGKPVVDIILDRAGQKGTGKWSVIEAQQLGIPATAIEAAVAARVLSSIKDERLAAEKAYGNIGVSKISGDKDAL LKDLELALFAGKIAAYAQGFAVMSGASKEFNWNLPMPTIARIWRAGCIIRSQMLDTMAEAFSSGGASTNLLMAPAFISLM QEAHPSLRRIVAKASEAGAPVPALSSALAYFDSYRQGRGTSNLIQAQRDFFGAHGFERIDEQGAFHGPWGSGAAG >Mature_475_residues MEKAEIGLIGLGTMGSNLALNIAEHGHRIAVFNRTRARTDAFVENAGALKDMVVPCYSLEELAAAIRPPRPIIIMVLAGK PVDEQIEALRGVLSGNDIVIDAGNANFRDTMRRFSELSGSGLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTA ISAKFKDEPCAAWLGTDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGMGPKDIGTVFSNWNKGRLNSYLIEITAKVL AADDPKTGKPVVDIILDRAGQKGTGKWSVIEAQQLGIPATAIEAAVAARVLSSIKDERLAAEKAYGNIGVSKISGDKDAL LKDLELALFAGKIAAYAQGFAVMSGASKEFNWNLPMPTIARIWRAGCIIRSQMLDTMAEAFSSGGASTNLLMAPAFISLM QEAHPSLRRIVAKASEAGAPVPALSSALAYFDSYRQGRGTSNLIQAQRDFFGAHGFERIDEQGAFHGPWGSGAAG
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=471, Percent_Identity=46.072186836518, Blast_Score=409, Evalue=1e-114, Organism=Escherichia coli, GI1788341, Length=471, Percent_Identity=46.4968152866242, Blast_Score=447, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17542558, Length=476, Percent_Identity=44.9579831932773, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6321695, Length=471, Percent_Identity=46.072186836518, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6321977, Length=466, Percent_Identity=45.0643776824034, Blast_Score=397, Evalue=1e-111, Organism=Drosophila melanogaster, GI24639279, Length=473, Percent_Identity=44.1860465116279, Blast_Score=386, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 50479; Mature: 50479
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAEIGLIGLGTMGSNLALNIAEHGHRIAVFNRTRARTDAFVENAGALKDMVVPCYSLE CCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCCCCHH ELAAAIRPPRPIIIMVLAGKPVDEQIEALRGVLSGNDIVIDAGNANFRDTMRRFSELSGS HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC GLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTAISAKFKDEPCAAWLGTDGAG CCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH HFVKTIHNGIEYADMQMIAEIYGILRDGLGMGPKDIGTVFSNWNKGRLNSYLIEITAKVL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH AADDPKTGKPVVDIILDRAGQKGTGKWSVIEAQQLGIPATAIEAAVAARVLSSIKDERLA CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AEKAYGNIGVSKISGDKDALLKDLELALFAGKIAAYAQGFAVMSGASKEFNWNLPMPTIA HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RIWRAGCIIRSQMLDTMAEAFSSGGASTNLLMAPAFISLMQEAHPSLRRIVAKASEAGAP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHCCCC VPALSSALAYFDSYRQGRGTSNLIQAQRDFFGAHGFERIDEQGAFHGPWGSGAAG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEKAEIGLIGLGTMGSNLALNIAEHGHRIAVFNRTRARTDAFVENAGALKDMVVPCYSLE CCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHCCCHHHHHHCCCCCHH ELAAAIRPPRPIIIMVLAGKPVDEQIEALRGVLSGNDIVIDAGNANFRDTMRRFSELSGS HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC GLTFIGMGVSGGEEGARHGPSIMVGGTEDSWKRVEKVLTAISAKFKDEPCAAWLGTDGAG CCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH HFVKTIHNGIEYADMQMIAEIYGILRDGLGMGPKDIGTVFSNWNKGRLNSYLIEITAKVL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH AADDPKTGKPVVDIILDRAGQKGTGKWSVIEAQQLGIPATAIEAAVAARVLSSIKDERLA CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AEKAYGNIGVSKISGDKDALLKDLELALFAGKIAAYAQGFAVMSGASKEFNWNLPMPTIA HHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RIWRAGCIIRSQMLDTMAEAFSSGGASTNLLMAPAFISLMQEAHPSLRRIVAKASEAGAP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHHHCCCC VPALSSALAYFDSYRQGRGTSNLIQAQRDFFGAHGFERIDEQGAFHGPWGSGAAG CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3020045; 7584049; 9384377; 1659648 [H]