| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is zur [H]
Identifier: 13472869
GI number: 13472869
Start: 2651709
End: 2652179
Strand: Reverse
Name: zur [H]
Synonym: mll3299
Alternate gene names: 13472869
Gene position: 2652179-2651709 (Counterclockwise)
Preceding gene: 13472875
Following gene: 13472867
Centisome position: 37.69
GC content: 62.63
Gene sequence:
>471_bases ATGGGATCAGGCGGTTTGCACGGGCAAACAGCCTGGAGATGGCGCAGGACAAGTTGGAACCGGACCATGGCGGCAAGGGA TGTGCTGACGAAGAACCAGTTGTGCGTGCTCGAGAAGCTCGAGACCGCCAGCGGACCGCTCAGCGCCTACACCTTGCTTG ACCAGTTGCGCGAGCGCGGTTTTCGCGCGCCGCTGCAGGTCTATCGCGCGCTCGACACGCTGGTGAAGTCCGGCTTCGTG CACCGGCTGGAAAGCATCAATTCCTTCGTCGCTTGCGCCGAGCCGCATGATCACAGCCATTCGATGACCGCCTTCGCCAT CTGCGACACCTGCGGGCAGGTGACCGAGATGTCGGATCACGATGTCGACCACCGGCTGAACGAATGGGTCCATTCGACGG GCTTCGCCGCCAAGAAGGCGGTCATAGAATTTCGCGGGACGTGCGCGAAGTGCCGGGCCGAGGCTGCCTAA
Upstream 100 bases:
>100_bases TGCCATCAAGCCTGCCGTCATCAAATGCGCCGGCACGTTATCGATGGGTCCGGGACAACAACAGAAAGAGTAGCAAAGAC GACGGTTCGTCGCTATCTGA
Downstream 100 bases:
>100_bases GCCTTCGCTTCGTCATACTAGGGCGAAGCAAGGAGCGAAGCGACGCGCGCAGACCCTAGTATCCATTCCGTGACATGGAC GTGTTGCAGCGATGCAGACC
Product: FUR family transcriptional regulator
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGSGGLHGQTAWRWRRTSWNRTMAARDVLTKNQLCVLEKLETASGPLSAYTLLDQLRERGFRAPLQVYRALDTLVKSGFV HRLESINSFVACAEPHDHSHSMTAFAICDTCGQVTEMSDHDVDHRLNEWVHSTGFAAKKAVIEFRGTCAKCRAEAA
Sequences:
>Translated_156_residues MGSGGLHGQTAWRWRRTSWNRTMAARDVLTKNQLCVLEKLETASGPLSAYTLLDQLRERGFRAPLQVYRALDTLVKSGFV HRLESINSFVACAEPHDHSHSMTAFAICDTCGQVTEMSDHDVDHRLNEWVHSTGFAAKKAVIEFRGTCAKCRAEAA >Mature_155_residues GSGGLHGQTAWRWRRTSWNRTMAARDVLTKNQLCVLEKLETASGPLSAYTLLDQLRERGFRAPLQVYRALDTLVKSGFVH RLESINSFVACAEPHDHSHSMTAFAICDTCGQVTEMSDHDVDHRLNEWVHSTGFAAKKAVIEFRGTCAKCRAEAA
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=134, Percent_Identity=42.5373134328358, Blast_Score=91, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17420; Mature: 17289
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGGLHGQTAWRWRRTSWNRTMAARDVLTKNQLCVLEKLETASGPLSAYTLLDQLRERG CCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC FRAPLQVYRALDTLVKSGFVHRLESINSFVACAEPHDHSHSMTAFAICDTCGQVTEMSDH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC DVDHRLNEWVHSTGFAAKKAVIEFRGTCAKCRAEAA CHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure GSGGLHGQTAWRWRRTSWNRTMAARDVLTKNQLCVLEKLETASGPLSAYTLLDQLRERG CCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC FRAPLQVYRALDTLVKSGFVHRLESINSFVACAEPHDHSHSMTAFAICDTCGQVTEMSDH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC DVDHRLNEWVHSTGFAAKKAVIEFRGTCAKCRAEAA CHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]