| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472831
Identifier: 13472831
GI number: 13472831
Start: 2599306
End: 2600520
Strand: Direct
Name: 13472831
Synonym: mlr3248
Alternate gene names: NA
Gene position: 2599306-2600520 (Clockwise)
Preceding gene: 13472821
Following gene: 13472832
Centisome position: 36.94
GC content: 59.84
Gene sequence:
>1215_bases ATGACCCAGCACGTACAAAACGCTCGAATTCTCATGTACAGCCACGATACGTTCGGGCTCGGCCACTTGCAGCGCTGCCG GACGATCGCGCATTCGCTGGTCGAGGATTTCCGCGGACTTCAGGTGCTTATCATTTCGGGTGCGACTATCGCTGGCGCCT TCGACTACCGCGCCCGTGTCGACTTCGTGAAGATCCCCAGCGTCATCAAGTTGCGCAACGGTGAGTACACCTCGCTGGAA AAGGATATCGATCTGCATGAGACGCTAAGGATGCGCCAGTCGATCATCCGCCACACAGCCGAGACCTTCCGGCCGGATAT CTTCATCGTCGACAAAGAACCGCTCGGTCTGCGCGGTGAGATTGAGGACACGCTGTCGTACCTCAAGACGCGGGGTACCA CGCTCGTGCTTGGCCTGCGCGAGGTGATGGATGCGCCACATCTGCTCGAAGCAGAGTGGGCACGCAGGGATGTGATGCGC AAGATAGGCCTGTTCTACGACAGGGTCTGGGCCTATGGTCCGCCGGATTTCTACGATCCGTTGACCGGCTTGGATGTGCC TCCGGCTGTCAGGGCAAAGATGACCTTCGTCGGTTTCCTGCAACGGAGCCTGCCGCGGAACGAGTTGCCCGGCCACCGGC CCGAGGGCGACTATATCCTCGTTACCACCGGTGGCGGGGGTGACGGCGCCGAACTGATCCACGACGTCATAGATGCCTAT CAACAGGATCCGCAATTGCAGCATAGGGCGCTGATCGTGCTTGGGCCTTACATGCCGGCGCGCAAGCGCAACAAGCTGCT CAAGAAGGGGTCCAAGATCCCCTACATCAAGATCATCGAGTTCGACAACCGCATGGAAGATCTGATTGCCGGTGCCAAGG CGGTGGTGGCGATGGGCGGCTACAACACCTATTGCGAGATACTGTCTTTCGACAAACCGGCGCTGATCGTGCCGCGCGTA GAGCCCCGAGAGGAACAACTGATCCGCGCAAAGCGCGCAGCCGAACTCGGCCTCATCGAGATGCTTTTGCCGGAAGAAGC CAAGGATTCTCAGCGGTTTGCCGATGCACTGGTGGTGCTGCCGGACCGGCCCCGCCCATCACAGAGCAATCCGCATCTGA CGCTGGAAGGGCTGCCTCATATATCCGAGATCGTCGCGGAACTGCTCGACCGGCGGGCCGGCCATCACCTTTCGGTCATC GAAGGCATGAACTGA
Upstream 100 bases:
>100_bases TCAATATTTCAAAACAGGTCGGGAGCGCTGCGGGGATGGTTTCGAAGCCTGAGGGGTCGCCGACGGTCCTCAAAACGAGA ATTCTAAAAGACGTTCAACA
Downstream 100 bases:
>100_bases GTTGCAACATCGCAAGATCGTCGTGGTTCTGAAGGGCTATCCGCGGCTGTCGGAAACCTTCATCGCGCAGGAACTGCTCG GTCTGGAGCGTGCGGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase Family; Glycosyltransferase Protein; RedA-Like Protein; Glycosyl Transferase; Glycosyl Transferase-Like Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTQHVQNARILMYSHDTFGLGHLQRCRTIAHSLVEDFRGLQVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSLE KDIDLHETLRMRQSIIRHTAETFRPDIFIVDKEPLGLRGEIEDTLSYLKTRGTTLVLGLREVMDAPHLLEAEWARRDVMR KIGLFYDRVWAYGPPDFYDPLTGLDVPPAVRAKMTFVGFLQRSLPRNELPGHRPEGDYILVTTGGGGDGAELIHDVIDAY QQDPQLQHRALIVLGPYMPARKRNKLLKKGSKIPYIKIIEFDNRMEDLIAGAKAVVAMGGYNTYCEILSFDKPALIVPRV EPREEQLIRAKRAAELGLIEMLLPEEAKDSQRFADALVVLPDRPRPSQSNPHLTLEGLPHISEIVAELLDRRAGHHLSVI EGMN
Sequences:
>Translated_404_residues MTQHVQNARILMYSHDTFGLGHLQRCRTIAHSLVEDFRGLQVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSLE KDIDLHETLRMRQSIIRHTAETFRPDIFIVDKEPLGLRGEIEDTLSYLKTRGTTLVLGLREVMDAPHLLEAEWARRDVMR KIGLFYDRVWAYGPPDFYDPLTGLDVPPAVRAKMTFVGFLQRSLPRNELPGHRPEGDYILVTTGGGGDGAELIHDVIDAY QQDPQLQHRALIVLGPYMPARKRNKLLKKGSKIPYIKIIEFDNRMEDLIAGAKAVVAMGGYNTYCEILSFDKPALIVPRV EPREEQLIRAKRAAELGLIEMLLPEEAKDSQRFADALVVLPDRPRPSQSNPHLTLEGLPHISEIVAELLDRRAGHHLSVI EGMN >Mature_403_residues TQHVQNARILMYSHDTFGLGHLQRCRTIAHSLVEDFRGLQVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSLEK DIDLHETLRMRQSIIRHTAETFRPDIFIVDKEPLGLRGEIEDTLSYLKTRGTTLVLGLREVMDAPHLLEAEWARRDVMRK IGLFYDRVWAYGPPDFYDPLTGLDVPPAVRAKMTFVGFLQRSLPRNELPGHRPEGDYILVTTGGGGDGAELIHDVIDAYQ QDPQLQHRALIVLGPYMPARKRNKLLKKGSKIPYIKIIEFDNRMEDLIAGAKAVVAMGGYNTYCEILSFDKPALIVPRVE PREEQLIRAKRAAELGLIEMLLPEEAKDSQRFADALVVLPDRPRPSQSNPHLTLEGLPHISEIVAELLDRRAGHHLSVIE GMN
Specific function: Unknown
COG id: COG4671
COG function: function code R; Predicted glycosyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45644; Mature: 45513
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHVQNARILMYSHDTFGLGHLQRCRTIAHSLVEDFRGLQVLIISGATIAGAFDYRARV CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECEECHHHEE DFVKIPSVIKLRNGEYTSLEKDIDLHETLRMRQSIIRHTAETFRPDIFIVDKEPLGLRGE EEEECCCEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC IEDTLSYLKTRGTTLVLGLREVMDAPHLLEAEWARRDVMRKIGLFYDRVWAYGPPDFYDP HHHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LTGLDVPPAVRAKMTFVGFLQRSLPRNELPGHRPEGDYILVTTGGGGDGAELIHDVIDAY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH QQDPQLQHRALIVLGPYMPARKRNKLLKKGSKIPYIKIIEFDNRMEDLIAGAKAVVAMGG HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHEEEECC YNTYCEILSFDKPALIVPRVEPREEQLIRAKRAAELGLIEMLLPEEAKDSQRFADALVVL CCHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEE PDRPRPSQSNPHLTLEGLPHISEIVAELLDRRAGHHLSVIEGMN CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECCCCC >Mature Secondary Structure TQHVQNARILMYSHDTFGLGHLQRCRTIAHSLVEDFRGLQVLIISGATIAGAFDYRARV CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECEECHHHEE DFVKIPSVIKLRNGEYTSLEKDIDLHETLRMRQSIIRHTAETFRPDIFIVDKEPLGLRGE EEEECCCEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC IEDTLSYLKTRGTTLVLGLREVMDAPHLLEAEWARRDVMRKIGLFYDRVWAYGPPDFYDP HHHHHHHHHHCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LTGLDVPPAVRAKMTFVGFLQRSLPRNELPGHRPEGDYILVTTGGGGDGAELIHDVIDAY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH QQDPQLQHRALIVLGPYMPARKRNKLLKKGSKIPYIKIIEFDNRMEDLIAGAKAVVAMGG HCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHEEEECC YNTYCEILSFDKPALIVPRVEPREEQLIRAKRAAELGLIEMLLPEEAKDSQRFADALVVL CCHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEE PDRPRPSQSNPHLTLEGLPHISEIVAELLDRRAGHHLSVIEGMN CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA