| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472828
Identifier: 13472828
GI number: 13472828
Start: 2594776
End: 2597679
Strand: Reverse
Name: 13472828
Synonym: mll3244
Alternate gene names: NA
Gene position: 2597679-2594776 (Counterclockwise)
Preceding gene: 13472829
Following gene: 13472827
Centisome position: 36.92
GC content: 58.68
Gene sequence:
>2904_bases ATGGAAACGCTGCGCCAGTTGCTGGTCAGCCGCGAAATTTCAGAGCTTTCACGAGTTACGCATCTGCTGGACGAACCGGA GCAGCTCGCGGCAGCCGTGGGCGACGTTCTTCCCAGTGCGGCCGCACGAGCGCCTCATGCGCAACTCGGCGAGGCCCTTG CGCCAGCTGTCGAAAGGGCTGTGCAACGGTCGATCCAGAAGAGCCCGCGCACGCTGACGGATATATTATACCCGGTGTTT CTGCCGGCAATTCGCAAGTCGATCGGGGAAAAGATCGACCAGACCTTTCAATCGCTGAATGAAACTTTAAGGCATATATT TACTTGGCATGGGCTCAAGTGGAGATTTGAATCTTGGAGAACCGGTGCTAGCTTCTCGGAAGTTGTTCTTAAACATTCTC TTGTCTATCGTGTAGAGCATGTCTTCCTTATTAGCCGAAATTCCGGACTTTTGATAGCGCATGTAGCTGCCGACAACGCG ACGAGCGAGGATCCTCAACTCATTTCTTCGATGCTTAGTGCAATTCAAGATTTTGTGAAGGACTCATTTAACGAGAAAGA ACAGAGCAGTCTGGACACTATTCGTTTTGGCGACCTTCGTCTCTGGTCAGAAGTTGGACAATTTGCGACCTTGGTTTCGG TGATCCGAGGAAATCCGCCAGAGGAATTACATGAAATAGTTCGCGATGTATTGCTTCGCATCCATGAGGAATGCTCACAG GCTTTAGGGGAGTTTGACGGCGACAGTTCGCAGTTGGCCGGCGTAGAGGCGCAATTGCAGACGTGCGTTGAGCTGAAGCA GGAGGAAGCAAACCAGGGATTTCCGTGGCTGGTGGTGGTTGCAGTCCTGCTGCTTTTAGTTCCGGCAGGCGGTTGGGTCC TTCTTTCCTGGCAATCCGGGCAGCGCTGGCAGGCCTATGTGTCGCGACTGGAGACCCAGCCGGGCATCATCGTTGCCGAA CAAAAGGTACGCTTTGGCCAATTCTATGTTGCCGGCCTGAGAGACCCGCTAAGCGCCGACCCGCAGTCGCTGTTGTCGGG AACGCAGGTCGATCCCGCCCGCGTTCATTCGCAGTGGAAATTCTATCAGAGCCTTGAGCCGGAGTTCGTGTTGAAGCGGC TGACGGCGTCGCTGGCTCCGCCGGATACAGTACTACTTTCGATCATCAAGGATCGCATCGTTGCCGAGGGCGAGGCTCCT GCCACCTGGATCGGCCGGGCGCAGGCCGCCGCCCAGCAGCTTTCGGCAGGCGGGCCGGTGTTCGATATCTCCGGGGTCCG TGATGTAAGCCTCGAAGAACGCGAGGCGGAGCGCTGGCAGGCCTATGTGTCGCGACTGGAGACCCAGCCGGGCATCATCG TTGCAGAGCAAAAGATACGCGACGGCCAATTCTATGTTGCCGGCCTGAGAGACCCGCTTGGCGCCGACCCGCAGTCGCTG TTGTCGGGAACGCAGGTCGATCCCGCCGGCGTTCATTCGCAGTGGAAATTCTATCAGAGCCTTGAGCCGGAGTTCGTGTT GAAGCGGCTGACGGCGTCGCTGGCTCCGCCGGATACAGTACGACTTTCGATCATCAAGGATCGCATCGTTGCCGAGGGCG AGGCTCCTGCCACCTGGATCGGCCGGGCGCAGGCCGCCGCCCAGCAGCTGTCGGCAGGCGGGCCGGTGTTCGATATCTCC GGGGTCCGTGATGTAAGCCTCGAAGAACGCGAGGCGGAGCGCTGGCAGGCCTATGTGTCGCGACTGGAGACCCAGCCGGG CATCATCGTTGCAGAGCAAAAGATACGCGACGGCCAATTCTATGTTGCCGGCCTGAGAGACCCGCTTGGCGCCGACCCGC AGTCGCTGTTGTCGGGAACGCAGGTCGATCCCGCCCGCGTTCATTCGCAGTGGAAATTCTATCAGAGCCTTGAGCCGGAG TTCGTGTTGAAGCGGCTGACGGCGTCGCTGTATCCGCCGGATACAGTGCGATTTTCGATCGTCAATGATCGCATCATTGC CGAGGGTGAGGCTCCCGACACCTGGATAGATAAGGCGCGCGCGGCGGCCCGACAGCTTTCGGCAGGCGGACCGGAATTCG ACATCTCCAAGGTTCGTGATGTAAGCCCCGAAGCGCGCGCGGCGGAGCATTGGCAGTATTATGTGTCGCGACTTGAGGCC CAACCGGGAATCATCGTCGCCCAGCAAACGGAAAGGGGCGGAGATTTCTACATTTCCGGCCTGAGAGACCCGCTTGCCGC CGACCCGCAAGCTCTGCTGCACGGAACGGAGGTTGATCCCGCCCGCGTTCATTCACAGTGGCAATTCTATCAGAGCCTTG ATCCGAAGTTCGTGGTGAAGCGGTTGCAGGCTTCGCTGACCCCGCCGAAATCGGTTCTGCTTTCGATCATCCAGGGTCGC ATCGTTGTCGTGGGTGAGGCTCCTGCCAACTGGATCAACCGGGCGCGGGCCGCCGCCGAACAACTTTCGGCGGACGGAGT GGTTCTGGATGTCTCGCAGCTGCAGGAGCTGAACCTTGCAGAACTTAATGATTTGCGAGAGGCCATCCAGGCGACCGATA TTTTCTTCTATTCCGGCAAAGTTGTGCCGGGACCAGAGCAGACGCCGGTTCTCGACAGATTGGCGGATCAAATAAAGGAA TTCGCCGAAAATGCCCGCAAGTCAGGCGTAACAGCGCGGTTCATGTTAACCGGCCATTCGGACGCCACGGGGCGTGAGAC GGCCAACGCGTCGATCAGCGCAGCCCGCGCCGAGACAGTTCGTGCGCTTCTCAACAAGCGCGGCGTCGCTCCGGAACTGC TGCTGGTTCGGGGCGCGGGCACCTTTGAGCCGCTGGTGCCTGAAAATAGTCAAACTGGGAGCTCCACCAATCGCCGGGTT TCGATTACGGTAAACCTGGACTAG
Upstream 100 bases:
>100_bases TGATCGCGAGGCTCTGGCTCGTCTTTTGATCGAAATTGCCCGGAACGTTGATCCGGACTACCGTGCGCGTTTCGACGGAG TTCCAAGCGCCGATCCTCGT
Downstream 100 bases:
>100_bases TGGAGCTCAAGATGTTGCAAAAAAAGATCTGCATGTTGGGCGGGTTCGGTGTCGGAAAGACGAGTCTGGTTCGCAGGTTT GTACAAAGCATCTTTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 967; Mature: 967
Protein sequence:
>967_residues METLRQLLVSREISELSRVTHLLDEPEQLAAAVGDVLPSAAARAPHAQLGEALAPAVERAVQRSIQKSPRTLTDILYPVF LPAIRKSIGEKIDQTFQSLNETLRHIFTWHGLKWRFESWRTGASFSEVVLKHSLVYRVEHVFLISRNSGLLIAHVAADNA TSEDPQLISSMLSAIQDFVKDSFNEKEQSSLDTIRFGDLRLWSEVGQFATLVSVIRGNPPEELHEIVRDVLLRIHEECSQ ALGEFDGDSSQLAGVEAQLQTCVELKQEEANQGFPWLVVVAVLLLLVPAGGWVLLSWQSGQRWQAYVSRLETQPGIIVAE QKVRFGQFYVAGLRDPLSADPQSLLSGTQVDPARVHSQWKFYQSLEPEFVLKRLTASLAPPDTVLLSIIKDRIVAEGEAP ATWIGRAQAAAQQLSAGGPVFDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSL LSGTQVDPAGVHSQWKFYQSLEPEFVLKRLTASLAPPDTVRLSIIKDRIVAEGEAPATWIGRAQAAAQQLSAGGPVFDIS GVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSLLSGTQVDPARVHSQWKFYQSLEPE FVLKRLTASLYPPDTVRFSIVNDRIIAEGEAPDTWIDKARAAARQLSAGGPEFDISKVRDVSPEARAAEHWQYYVSRLEA QPGIIVAQQTERGGDFYISGLRDPLAADPQALLHGTEVDPARVHSQWQFYQSLDPKFVVKRLQASLTPPKSVLLSIIQGR IVVVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLADQIKE FAENARKSGVTARFMLTGHSDATGRETANASISAARAETVRALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRV SITVNLD
Sequences:
>Translated_967_residues METLRQLLVSREISELSRVTHLLDEPEQLAAAVGDVLPSAAARAPHAQLGEALAPAVERAVQRSIQKSPRTLTDILYPVF LPAIRKSIGEKIDQTFQSLNETLRHIFTWHGLKWRFESWRTGASFSEVVLKHSLVYRVEHVFLISRNSGLLIAHVAADNA TSEDPQLISSMLSAIQDFVKDSFNEKEQSSLDTIRFGDLRLWSEVGQFATLVSVIRGNPPEELHEIVRDVLLRIHEECSQ ALGEFDGDSSQLAGVEAQLQTCVELKQEEANQGFPWLVVVAVLLLLVPAGGWVLLSWQSGQRWQAYVSRLETQPGIIVAE QKVRFGQFYVAGLRDPLSADPQSLLSGTQVDPARVHSQWKFYQSLEPEFVLKRLTASLAPPDTVLLSIIKDRIVAEGEAP ATWIGRAQAAAQQLSAGGPVFDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSL LSGTQVDPAGVHSQWKFYQSLEPEFVLKRLTASLAPPDTVRLSIIKDRIVAEGEAPATWIGRAQAAAQQLSAGGPVFDIS GVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSLLSGTQVDPARVHSQWKFYQSLEPE FVLKRLTASLYPPDTVRFSIVNDRIIAEGEAPDTWIDKARAAARQLSAGGPEFDISKVRDVSPEARAAEHWQYYVSRLEA QPGIIVAQQTERGGDFYISGLRDPLAADPQALLHGTEVDPARVHSQWQFYQSLDPKFVVKRLQASLTPPKSVLLSIIQGR IVVVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLADQIKE FAENARKSGVTARFMLTGHSDATGRETANASISAARAETVRALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRV SITVNLD >Mature_967_residues METLRQLLVSREISELSRVTHLLDEPEQLAAAVGDVLPSAAARAPHAQLGEALAPAVERAVQRSIQKSPRTLTDILYPVF LPAIRKSIGEKIDQTFQSLNETLRHIFTWHGLKWRFESWRTGASFSEVVLKHSLVYRVEHVFLISRNSGLLIAHVAADNA TSEDPQLISSMLSAIQDFVKDSFNEKEQSSLDTIRFGDLRLWSEVGQFATLVSVIRGNPPEELHEIVRDVLLRIHEECSQ ALGEFDGDSSQLAGVEAQLQTCVELKQEEANQGFPWLVVVAVLLLLVPAGGWVLLSWQSGQRWQAYVSRLETQPGIIVAE QKVRFGQFYVAGLRDPLSADPQSLLSGTQVDPARVHSQWKFYQSLEPEFVLKRLTASLAPPDTVLLSIIKDRIVAEGEAP ATWIGRAQAAAQQLSAGGPVFDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSL LSGTQVDPAGVHSQWKFYQSLEPEFVLKRLTASLAPPDTVRLSIIKDRIVAEGEAPATWIGRAQAAAQQLSAGGPVFDIS GVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSLLSGTQVDPARVHSQWKFYQSLEPE FVLKRLTASLYPPDTVRFSIVNDRIIAEGEAPDTWIDKARAAARQLSAGGPEFDISKVRDVSPEARAAEHWQYYVSRLEA QPGIIVAQQTERGGDFYISGLRDPLAADPQALLHGTEVDPARVHSQWQFYQSLDPKFVVKRLQASLTPPKSVLLSIIQGR IVVVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLAELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLADQIKE FAENARKSGVTARFMLTGHSDATGRETANASISAARAETVRALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRV SITVNLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106565; Mature: 106565
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLRQLLVSREISELSRVTHLLDEPEQLAAAVGDVLPSAAARAPHAQLGEALAPAVERA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VQRSIQKSPRTLTDILYPVFLPAIRKSIGEKIDQTFQSLNETLRHIFTWHGLKWRFESWR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCC TGASFSEVVLKHSLVYRVEHVFLISRNSGLLIAHVAADNATSEDPQLISSMLSAIQDFVK CCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH DSFNEKEQSSLDTIRFGDLRLWSEVGQFATLVSVIRGNPPEELHEIVRDVLLRIHEECSQ HHCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ALGEFDGDSSQLAGVEAQLQTCVELKQEEANQGFPWLVVVAVLLLLVPAGGWVLLSWQSG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC QRWQAYVSRLETQPGIIVAEQKVRFGQFYVAGLRDPLSADPQSLLSGTQVDPARVHSQWK CHHHHHHHHHCCCCCEEEECCCHHHHHEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHH FYQSLEPEFVLKRLTASLAPPDTVLLSIIKDRIVAEGEAPATWIGRAQAAAQQLSAGGPV HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCE FDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSL EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHH LSGTQVDPAGVHSQWKFYQSLEPEFVLKRLTASLAPPDTVRLSIIKDRIVAEGEAPATWI HCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHH GRAQAAAQQLSAGGPVFDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQF HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCE YVAGLRDPLGADPQSLLSGTQVDPARVHSQWKFYQSLEPEFVLKRLTASLYPPDTVRFSI EEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEE VNDRIIAEGEAPDTWIDKARAAARQLSAGGPEFDISKVRDVSPEARAAEHWQYYVSRLEA ECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC QPGIIVAQQTERGGDFYISGLRDPLAADPQALLHGTEVDPARVHSQWQFYQSLDPKFVVK CCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH RLQASLTPPKSVLLSIIQGRIVVVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLA HHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHH ELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLADQIKEFAENARKSGVTARFMLTGHS HHHHHHHHHHHHHEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC DATGRETANASISAARAETVRALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRV CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE SITVNLD EEEEECC >Mature Secondary Structure METLRQLLVSREISELSRVTHLLDEPEQLAAAVGDVLPSAAARAPHAQLGEALAPAVERA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VQRSIQKSPRTLTDILYPVFLPAIRKSIGEKIDQTFQSLNETLRHIFTWHGLKWRFESWR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCC TGASFSEVVLKHSLVYRVEHVFLISRNSGLLIAHVAADNATSEDPQLISSMLSAIQDFVK CCCHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH DSFNEKEQSSLDTIRFGDLRLWSEVGQFATLVSVIRGNPPEELHEIVRDVLLRIHEECSQ HHCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ALGEFDGDSSQLAGVEAQLQTCVELKQEEANQGFPWLVVVAVLLLLVPAGGWVLLSWQSG HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC QRWQAYVSRLETQPGIIVAEQKVRFGQFYVAGLRDPLSADPQSLLSGTQVDPARVHSQWK CHHHHHHHHHCCCCCEEEECCCHHHHHEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHH FYQSLEPEFVLKRLTASLAPPDTVLLSIIKDRIVAEGEAPATWIGRAQAAAQQLSAGGPV HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCE FDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQFYVAGLRDPLGADPQSL EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHH LSGTQVDPAGVHSQWKFYQSLEPEFVLKRLTASLAPPDTVRLSIIKDRIVAEGEAPATWI HCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHH GRAQAAAQQLSAGGPVFDISGVRDVSLEEREAERWQAYVSRLETQPGIIVAEQKIRDGQF HHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCE YVAGLRDPLGADPQSLLSGTQVDPARVHSQWKFYQSLEPEFVLKRLTASLYPPDTVRFSI EEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEE VNDRIIAEGEAPDTWIDKARAAARQLSAGGPEFDISKVRDVSPEARAAEHWQYYVSRLEA ECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCC QPGIIVAQQTERGGDFYISGLRDPLAADPQALLHGTEVDPARVHSQWQFYQSLDPKFVVK CCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH RLQASLTPPKSVLLSIIQGRIVVVGEAPANWINRARAAAEQLSADGVVLDVSQLQELNLA HHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHH ELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLADQIKEFAENARKSGVTARFMLTGHS HHHHHHHHHHHHHEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC DATGRETANASISAARAETVRALLNKRGVAPELLLVRGAGTFEPLVPENSQTGSSTNRRV CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE SITVNLD EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA