BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is 13472827

Identifier: 13472827

GI number: 13472827

Start: 2594270

End: 2594776

Strand: Reverse

Name: 13472827

Synonym: mll3243

Alternate gene names: NA

Gene position: 2594776-2594270 (Counterclockwise)

Preceding gene: 13472828

Following gene: 13472826

Centisome position: 36.88

GC content: 51.08

Gene sequence:

>507_bases
GTGGAGCTCAAGATGTTGCAAAAAAAGATCTGCATGTTGGGCGGGTTCGGTGTCGGAAAGACGAGTCTGGTTCGCAGGTT
TGTACAAAGCATCTTTTCAGAAACCTACTTGACCACGGTGGGAGTGAAAATCGACAAGAAGAGCGTCGCACTCCCGGACA
AAACCGTGGATCTGATTTTGTGGGATTTGGCCGGCGAAGACGATATCGGCTCATTCCGCGTCAGCCATGTGCGAGGTGCG
ACTGGGCTCGTGCTTGTCGTTGATGGAACCCGTGCCGCTACTCTTGCCGCGGCGCTCACGCTGCGTGAGCGAGTCGAGGC
TGAATTCGGCACTATGCCGTTTGTATTGCTGTTCAACAAATCCGATCTTGCTGATCGGTGGGAAATATCGGATGGTGACA
TTGACAATCTGAGGCAGCTTGGATGGCAAATCTATTTAACAAGTGCGCTTTCTGGTGAGTATGTTGATGATGCGTTTCAT
CAACTTGCTTCGATGGTTGCCAAATAG

Upstream 100 bases:

>100_bases
TGGTTCGGGGCGCGGGCACCTTTGAGCCGCTGGTGCCTGAAAATAGTCAAACTGGGAGCTCCACCAATCGCCGGGTTTCG
ATTACGGTAAACCTGGACTA

Downstream 100 bases:

>100_bases
ACCATGCATAGATTGCCAAAAGAAGTCGGAAGCTGGATTTATAATTTTTTTTATAACGAGCACTCTATCGCTTATCTGAA
AATTGACGCCCAGCTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MELKMLQKKICMLGGFGVGKTSLVRRFVQSIFSETYLTTVGVKIDKKSVALPDKTVDLILWDLAGEDDIGSFRVSHVRGA
TGLVLVVDGTRAATLAAALTLRERVEAEFGTMPFVLLFNKSDLADRWEISDGDIDNLRQLGWQIYLTSALSGEYVDDAFH
QLASMVAK

Sequences:

>Translated_168_residues
MELKMLQKKICMLGGFGVGKTSLVRRFVQSIFSETYLTTVGVKIDKKSVALPDKTVDLILWDLAGEDDIGSFRVSHVRGA
TGLVLVVDGTRAATLAAALTLRERVEAEFGTMPFVLLFNKSDLADRWEISDGDIDNLRQLGWQIYLTSALSGEYVDDAFH
QLASMVAK
>Mature_168_residues
MELKMLQKKICMLGGFGVGKTSLVRRFVQSIFSETYLTTVGVKIDKKSVALPDKTVDLILWDLAGEDDIGSFRVSHVRGA
TGLVLVVDGTRAATLAAALTLRERVEAEFGTMPFVLLFNKSDLADRWEISDGDIDNLRQLGWQIYLTSALSGEYVDDAFH
QLASMVAK

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34485716, Length=156, Percent_Identity=33.974358974359, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI34485714, Length=156, Percent_Identity=33.974358974359, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI4506363, Length=157, Percent_Identity=31.8471337579618, Blast_Score=84, Evalue=4e-17,
Organism=Homo sapiens, GI96975097, Length=159, Percent_Identity=35.2201257861635, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI38679888, Length=159, Percent_Identity=34.5911949685535, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI19923231, Length=159, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=8e-16,
Organism=Homo sapiens, GI21361418, Length=158, Percent_Identity=35.4430379746835, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI5803135, Length=161, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI256222019, Length=157, Percent_Identity=31.8471337579618, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI7706563, Length=157, Percent_Identity=30.5732484076433, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI256985160, Length=163, Percent_Identity=35.5828220858896, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI256985158, Length=163, Percent_Identity=35.5828220858896, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI34147513, Length=169, Percent_Identity=33.1360946745562, Blast_Score=76, Evalue=1e-14,
Organism=Homo sapiens, GI13569962, Length=164, Percent_Identity=30.4878048780488, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI82659107, Length=162, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI4506371, Length=170, Percent_Identity=33.5294117647059, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI5803133, Length=160, Percent_Identity=30.625, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI16933567, Length=157, Percent_Identity=29.2993630573248, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI4506365, Length=153, Percent_Identity=32.0261437908497, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI19923985, Length=161, Percent_Identity=27.9503105590062, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI208609962, Length=144, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI4506375, Length=144, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI116812567, Length=154, Percent_Identity=33.1168831168831, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI11641237, Length=161, Percent_Identity=31.6770186335404, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI33946329, Length=160, Percent_Identity=33.125, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI19923260, Length=163, Percent_Identity=33.7423312883436, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI4506405, Length=160, Percent_Identity=32.5, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI21361884, Length=162, Percent_Identity=30.2469135802469, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI33589861, Length=164, Percent_Identity=29.2682926829268, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI5729997, Length=173, Percent_Identity=29.4797687861272, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI4758988, Length=167, Percent_Identity=28.7425149700599, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI41393614, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI41393545, Length=124, Percent_Identity=35.4838709677419, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI50234889, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI4506367, Length=162, Percent_Identity=26.5432098765432, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI4759000, Length=162, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI106507164, Length=165, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI19923262, Length=167, Percent_Identity=29.940119760479, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI296011025, Length=165, Percent_Identity=32.1212121212121, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI19923483, Length=165, Percent_Identity=29.0909090909091, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI19923750, Length=161, Percent_Identity=26.7080745341615, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI117938299, Length=123, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI116875763, Length=123, Percent_Identity=32.520325203252, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI10190714, Length=172, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI262527293, Length=87, Percent_Identity=35.632183908046, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17553774, Length=158, Percent_Identity=34.8101265822785, Blast_Score=83, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17509233, Length=160, Percent_Identity=33.125, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994817, Length=175, Percent_Identity=30.8571428571429, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17570073, Length=157, Percent_Identity=33.7579617834395, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17555956, Length=159, Percent_Identity=29.559748427673, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17536699, Length=162, Percent_Identity=35.1851851851852, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17558550, Length=160, Percent_Identity=33.125, Blast_Score=77, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25150215, Length=157, Percent_Identity=28.0254777070064, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17535871, Length=166, Percent_Identity=30.7228915662651, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17507539, Length=153, Percent_Identity=32.0261437908497, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17555898, Length=160, Percent_Identity=31.25, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17542026, Length=167, Percent_Identity=30.5389221556886, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71982452, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71982447, Length=164, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115534425, Length=166, Percent_Identity=29.5180722891566, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17543864, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17506899, Length=162, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17510659, Length=175, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17568765, Length=166, Percent_Identity=28.9156626506024, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323642, Length=164, Percent_Identity=36.5853658536585, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323291, Length=159, Percent_Identity=35.2201257861635, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321107, Length=164, Percent_Identity=31.7073170731707, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321070, Length=162, Percent_Identity=30.8641975308642, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321228, Length=159, Percent_Identity=28.3018867924528, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320869, Length=160, Percent_Identity=28.75, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321591, Length=164, Percent_Identity=31.0975609756098, Blast_Score=61, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324663, Length=156, Percent_Identity=28.8461538461538, Blast_Score=61, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17137220, Length=158, Percent_Identity=33.5443037974684, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI17737663, Length=158, Percent_Identity=30.379746835443, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17737369, Length=160, Percent_Identity=30.625, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648682, Length=160, Percent_Identity=30.625, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17865835, Length=169, Percent_Identity=33.7278106508876, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20129057, Length=159, Percent_Identity=29.559748427673, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641152, Length=161, Percent_Identity=34.1614906832298, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17737545, Length=167, Percent_Identity=29.940119760479, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24582410, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19920864, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24582407, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137088, Length=160, Percent_Identity=31.25, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17137218, Length=165, Percent_Identity=29.6969696969697, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574177, Length=165, Percent_Identity=29.6969696969697, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574179, Length=165, Percent_Identity=29.6969696969697, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357169, Length=146, Percent_Identity=28.0821917808219, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI17933630, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24652024, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45552705, Length=160, Percent_Identity=30, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24654467, Length=160, Percent_Identity=30, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI17647849, Length=160, Percent_Identity=30, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24652026, Length=169, Percent_Identity=29.585798816568, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24652028, Length=169, Percent_Identity=29.585798816568, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737457, Length=161, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24639550, Length=159, Percent_Identity=32.0754716981132, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45551040, Length=169, Percent_Identity=29.585798816568, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17933550, Length=159, Percent_Identity=32.0754716981132, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24639552, Length=159, Percent_Identity=32.0754716981132, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17736973, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581105, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581107, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581110, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581103, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581101, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641019, Length=159, Percent_Identity=32.7044025157233, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19549675, Length=162, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17137216, Length=162, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18517; Mature: 18517

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKMLQKKICMLGGFGVGKTSLVRRFVQSIFSETYLTTVGVKIDKKSVALPDKTVDLIL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEE
WDLAGEDDIGSFRVSHVRGATGLVLVVDGTRAATLAAALTLRERVEAEFGTMPFVLLFNK
EECCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SDLADRWEISDGDIDNLRQLGWQIYLTSALSGEYVDDAFHQLASMVAK
CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELKMLQKKICMLGGFGVGKTSLVRRFVQSIFSETYLTTVGVKIDKKSVALPDKTVDLIL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEE
WDLAGEDDIGSFRVSHVRGATGLVLVVDGTRAATLAAALTLRERVEAEFGTMPFVLLFNK
EECCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SDLADRWEISDGDIDNLRQLGWQIYLTSALSGEYVDDAFHQLASMVAK
CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA