| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yicG [C]
Identifier: 13472807
GI number: 13472807
Start: 2573390
End: 2574028
Strand: Reverse
Name: yicG [C]
Synonym: mll3219
Alternate gene names: 13472807
Gene position: 2574028-2573390 (Counterclockwise)
Preceding gene: 13472808
Following gene: 13472799
Centisome position: 36.58
GC content: 65.41
Gene sequence:
>639_bases ATGCCCTTGAACCCCATCGCCCTTCTCGACTATGCCGGCGTCGCCGTTTTTGCGGCGACCGGGGCGTTGGCTGCCTCGCG CAAGCAACTCGACATTATCGGTTTCCTGTTCTTGGCCAGCGTCACTGGCATTGGCGGTGGCACGTTTCGCGACCTCATCC TCAACGTGCCGGTCTTCTGGGTGGGAAACCGCGACTATGTGCTGATCTGCGCCGTGGTGGCGGTCCTGGTCTTCTTCACC GCGCATCGCGTCGAATCCCGATACAAGCTGCTGCTGTGGCTCGACGCCATCGGGCTCGCCGCCTTTTCGGTGATGGGCGC GGCCAAGGGTCTTGGCATCACCGGCTCGCCGGTGGTTTCGATCATCACCGGCATGCTGACCGCGACCTTTGGCGGCATAT TGCGCGATCTGCTGGCCGGCGAGCCGTCGGTGCTGCTGAGGCCGGAGATCTACGTCACGGCCGCCCTGGCGGGCGCGGCC ATCTTCACATTAGGTGACGTCGCCGGATTGCCGCAGTTTGTCTCGGGGTTGGCCGGCTTCGTCGTGGCGCTCGCCGTGCG CGGCGGCGCGCTGCGTTTCGGCTGGGCGTTTCCGTCCTACAAGAGCCGGCCCGGCCGACGGCCGGAAGATATTCCGTGA
Upstream 100 bases:
>100_bases CAGTAGGCAGTAGGCAGTAGGCAGTAGGGAATAAGGCAGTCGTATGAATCGCGCGGCTTCGTGCTATTCATACGCCCCAA TTCCCAATCCCTACTGCCTC
Downstream 100 bases:
>100_bases ATCAGGCCTTCGCTGCCTGCCAAAGCGTCCATCAGCTTTTTGGGCGCTTGTCGGATCCATGTCCGTTCGAGCCGATGGCG CAATTCTTCGGGCGGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPLNPIALLDYAGVAVFAATGALAASRKQLDIIGFLFLASVTGIGGGTFRDLILNVPVFWVGNRDYVLICAVVAVLVFFT AHRVESRYKLLLWLDAIGLAAFSVMGAAKGLGITGSPVVSIITGMLTATFGGILRDLLAGEPSVLLRPEIYVTAALAGAA IFTLGDVAGLPQFVSGLAGFVVALAVRGGALRFGWAFPSYKSRPGRRPEDIP
Sequences:
>Translated_212_residues MPLNPIALLDYAGVAVFAATGALAASRKQLDIIGFLFLASVTGIGGGTFRDLILNVPVFWVGNRDYVLICAVVAVLVFFT AHRVESRYKLLLWLDAIGLAAFSVMGAAKGLGITGSPVVSIITGMLTATFGGILRDLLAGEPSVLLRPEIYVTAALAGAA IFTLGDVAGLPQFVSGLAGFVVALAVRGGALRFGWAFPSYKSRPGRRPEDIP >Mature_211_residues PLNPIALLDYAGVAVFAATGALAASRKQLDIIGFLFLASVTGIGGGTFRDLILNVPVFWVGNRDYVLICAVVAVLVFFTA HRVESRYKLLLWLDAIGLAAFSVMGAAKGLGITGSPVVSIITGMLTATFGGILRDLLAGEPSVLLRPEIYVTAALAGAAI FTLGDVAGLPQFVSGLAGFVVALAVRGGALRFGWAFPSYKSRPGRRPEDIP
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=172, Percent_Identity=34.3023255813954, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI1786352, Length=195, Percent_Identity=35.8974358974359, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22122; Mature: 21991
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNPIALLDYAGVAVFAATGALAASRKQLDIIGFLFLASVTGIGGGTFRDLILNVPVFW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEE VGNRDYVLICAVVAVLVFFTAHRVESRYKLLLWLDAIGLAAFSVMGAAKGLGITGSPVVS ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IITGMLTATFGGILRDLLAGEPSVLLRPEIYVTAALAGAAIFTLGDVAGLPQFVSGLAGF HHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VVALAVRGGALRFGWAFPSYKSRPGRRPEDIP HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PLNPIALLDYAGVAVFAATGALAASRKQLDIIGFLFLASVTGIGGGTFRDLILNVPVFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEE VGNRDYVLICAVVAVLVFFTAHRVESRYKLLLWLDAIGLAAFSVMGAAKGLGITGSPVVS ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IITGMLTATFGGILRDLLAGEPSVLLRPEIYVTAALAGAAIFTLGDVAGLPQFVSGLAGF HHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VVALAVRGGALRFGWAFPSYKSRPGRRPEDIP HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301; 1741267 [H]