| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472759
Identifier: 13472759
GI number: 13472759
Start: 2532237
End: 2532800
Strand: Reverse
Name: 13472759
Synonym: mll3161
Alternate gene names: NA
Gene position: 2532800-2532237 (Counterclockwise)
Preceding gene: 13472760
Following gene: 13472752
Centisome position: 36.0
GC content: 62.06
Gene sequence:
>564_bases ATGCTGCGCAAGCTTCTCATCCTCAGCGTCTTTGCCGGGACATCGGCATCGATCCCGGTCATCTATCAGTCGAATCCGCA GATATTCGAAAACCTGCTGAAATCGACGGTGACGGCCAAGCCCGAGGTCGAGGCACAACCGCAGGTCAGCCTGGCGTCGG TTCCCGACAGACCGGCCGCGCCGCTGCCGACCGGCCGCAAGGTCGCCGTCACAGCGGACGGGCGCGGACATTTCTCGACC ACCTTCAAACTCAACGGCCGTCAGGTCGACGGGATGATCGACACCGGCGCGACGCTGGTCGCGGTCAATACGTCGACGGC ACGCAGGATCGGGCTGTCGCTCAATCCGTCCGATTTCAGCCATGAGGTCAACACCGCCAACGGCTCGATCAAGGCGGCCG TGGTGACGATCGACCGGCTGCAGATCGGCAGCATCAGTGTCGACGACGTGCAGGCCATCGTGCTTGACGACAAGGCGCTC AGCACCAACCTGATCGGCATGAGCTTTCTCAACCGGCTCGGCAAATATCAGGCCGAAAACGGTACGCTGCTGCTCGTCCA GTAA
Upstream 100 bases:
>100_bases ACGATTTACCAAGCGTTTACGCAAAGACATGGTTTCGGCGCCCGTTAAAGCGGCGAACACCATCCGGCGATAATGAATCG GCTCTCACAAAGGCCGATCC
Downstream 100 bases:
>100_bases TCAACCGCGCGGCAGGATCCGCCGCATGACGGTTTTGTCCGCCGCTGGTTTCGAGGCGCCGATCGCATAGGCCGAAACCA CAGTCGCGGCCGCCGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLRKLLILSVFAGTSASIPVIYQSNPQIFENLLKSTVTAKPEVEAQPQVSLASVPDRPAAPLPTGRKVAVTADGRGHFST TFKLNGRQVDGMIDTGATLVAVNTSTARRIGLSLNPSDFSHEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKAL STNLIGMSFLNRLGKYQAENGTLLLVQ
Sequences:
>Translated_187_residues MLRKLLILSVFAGTSASIPVIYQSNPQIFENLLKSTVTAKPEVEAQPQVSLASVPDRPAAPLPTGRKVAVTADGRGHFST TFKLNGRQVDGMIDTGATLVAVNTSTARRIGLSLNPSDFSHEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKAL STNLIGMSFLNRLGKYQAENGTLLLVQ >Mature_187_residues MLRKLLILSVFAGTSASIPVIYQSNPQIFENLLKSTVTAKPEVEAQPQVSLASVPDRPAAPLPTGRKVAVTADGRGHFST TFKLNGRQVDGMIDTGATLVAVNTSTARRIGLSLNPSDFSHEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKAL STNLIGMSFLNRLGKYQAENGTLLLVQ
Specific function: Unknown
COG id: COG3577
COG function: function code R; Predicted aspartyl protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19828; Mature: 19828
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLLILSVFAGTSASIPVIYQSNPQIFENLLKSTVTAKPEVEAQPQVSLASVPDRPAA CCHHEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC PLPTGRKVAVTADGRGHFSTTFKLNGRQVDGMIDTGATLVAVNTSTARRIGLSLNPSDFS CCCCCCEEEEEECCCCCEEEEEEECCEEECCEEECCCEEEEEECCCCEEEEEEECCCCCC HEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKALSTNLIGMSFLNRLGKYQAEN CEEECCCCCEEEEEEEEEEEEECCEEHHCEEEEEEECCCCCCHHHHHHHHHHHCCEECCC GTLLLVQ CEEEEEC >Mature Secondary Structure MLRKLLILSVFAGTSASIPVIYQSNPQIFENLLKSTVTAKPEVEAQPQVSLASVPDRPAA CCHHEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC PLPTGRKVAVTADGRGHFSTTFKLNGRQVDGMIDTGATLVAVNTSTARRIGLSLNPSDFS CCCCCCEEEEEECCCCCEEEEEEECCEEECCEEECCCEEEEEECCCCEEEEEEECCCCCC HEVNTANGSIKAAVVTIDRLQIGSISVDDVQAIVLDDKALSTNLIGMSFLNRLGKYQAEN CEEECCCCCEEEEEEEEEEEEECCEEHHCEEEEEEECCCCCCHHHHHHHHHHHCCEECCC GTLLLVQ CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA