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The map label for this gene is yciF [H]

Identifier: 13472739

GI number: 13472739

Start: 2516744

End: 2517226

Strand: Direct

Name: yciF [H]

Synonym: mlr3134

Alternate gene names: 13472739

Gene position: 2516744-2517226 (Clockwise)

Preceding gene: 13472733

Following gene: 13472741

Centisome position: 35.77

GC content: 61.28

Gene sequence:

>483_bases
ATGCTCGACGACCTGTTTCACGACACGCTGAAGGACATCTATTTCGCCGAAAAGAAGATATTGGCGACACTGCCGAAAAT
GGCCAAGGCCGCGCAAAGCGCCGAGCTGAAGGCCGCCTTCGAAAAGCACCGCACCGAGACCGAGGGCCACGTCGCCAGGC
TGGAGAAAGTCTTCGGCGTGATCGGCAAGAAGCCGGTCGGCAAGACCTGTGCGGCCATCATGGGCATCACCGAGGAAGGC
GCCGAGATCATGGAGGAGTACAAGGGATCTCCCGCGCTCGATGCCGGTCTGCTGGCCGCCGCGCAGGCGGTCGAGCACTA
CGAGATCTCACGCTATGGCACGCTGAGGACATGGGCCGGTGAACTCGGCCTGAACGAAGCCGTGACGCTTCTCGAAGCAA
CGCTGAAGGAAGAGAAGGCCACGGACGAGGCCCTGACCAAGATCGCTGAGACGGCGGTCAACGTAGCAGCCGAAGCAGCA
TAA

Upstream 100 bases:

>100_bases
TGGACCGCGCTGTGCGGCGCGGATGGAACGAATCATCCTGCGGGAGATTGTCGACCTGAGGGTTCACGCATCAGAGGATA
TGACGATGGCAAAGCAGAAA

Downstream 100 bases:

>100_bases
ATCCGCAAGATCGGAGAACGCACTGATCGGCCCAAGGCGTGTCGAGATTCAGGTCAGGTCGCGGCGAAAACGATGGCTTT
CGAGAACCGGAGCGGAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLDDLFHDTLKDIYFAEKKILATLPKMAKAAQSAELKAAFEKHRTETEGHVARLEKVFGVIGKKPVGKTCAAIMGITEEG
AEIMEEYKGSPALDAGLLAAAQAVEHYEISRYGTLRTWAGELGLNEAVTLLEATLKEEKATDEALTKIAETAVNVAAEAA

Sequences:

>Translated_160_residues
MLDDLFHDTLKDIYFAEKKILATLPKMAKAAQSAELKAAFEKHRTETEGHVARLEKVFGVIGKKPVGKTCAAIMGITEEG
AEIMEEYKGSPALDAGLLAAAQAVEHYEISRYGTLRTWAGELGLNEAVTLLEATLKEEKATDEALTKIAETAVNVAAEAA
>Mature_160_residues
MLDDLFHDTLKDIYFAEKKILATLPKMAKAAQSAELKAAFEKHRTETEGHVARLEKVFGVIGKKPVGKTCAAIMGITEEG
AEIMEEYKGSPALDAGLLAAAQAVEHYEISRYGTLRTWAGELGLNEAVTLLEATLKEEKATDEALTKIAETAVNVAAEAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=158, Percent_Identity=42.4050632911392, Blast_Score=116, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDLFHDTLKDIYFAEKKILATLPKMAKAAQSAELKAAFEKHRTETEGHVARLEKVFGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IGKKPVGKTCAAIMGITEEGAEIMEEYKGSPALDAGLLAAAQAVEHYEISRYGTLRTWAG
HCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELGLNEAVTLLEATLKEEKATDEALTKIAETAVNVAAEAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDDLFHDTLKDIYFAEKKILATLPKMAKAAQSAELKAAFEKHRTETEGHVARLEKVFGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IGKKPVGKTCAAIMGITEEGAEIMEEYKGSPALDAGLLAAAQAVEHYEISRYGTLRTWAG
HCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELGLNEAVTLLEATLKEEKATDEALTKIAETAVNVAAEAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]