| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yebQ [C]
Identifier: 13472733
GI number: 13472733
Start: 2506674
End: 2508110
Strand: Direct
Name: yebQ [C]
Synonym: mlr3125
Alternate gene names: 13472733
Gene position: 2506674-2508110 (Clockwise)
Preceding gene: 13472732
Following gene: 13472739
Centisome position: 35.63
GC content: 67.08
Gene sequence:
>1437_bases ATGACTGAAATCAGCACAAACAGGGTCGACTGGCGGGCATTGTGGGCGAGCGGCGACCTGGCGCGCTTCTGCTTCATCAG CCTCGGCATCCTGCTGCACGCCACCAACGAGACGATGGTTGCGACCGTCATGCCGGCCATGGTCGGTGAACTGGCCGGGG TGCAACTCGTCGGCTGGTCATTGGCGATCTACGAGCTCGGCGCCATCGTCGCCGGTGCCGCCGCCGGGCGGCTGGTGAGC TATGTGGCGCTGCGCACCAATATGGTGGTCGCGGCCCTGCTCTACGCGGCCGGTGCGCTGATCTGCGCCACCTCGCCTTC CATGCAGTTGTTCCTCGCCGGCCGGCTGATCGAGGGACTGGGCGGTGGCGCGCTGGTGTCGCTCGCCTTCGTCTCGGTCG AGCGGCTGTTTTCGCGCGCCATCTGGCCGCAGCTCTTCGGCATCATGTCGGCGATCTGGGGCGTCGCGGCGTTCAGCGGC CCGTTGCTGGGCGCGCTCATGACCGAATTCCTGTCGTGGCGCTGGGCCTTCGGCGTCTTCACCCTCGGCGGCGCCACCAT GGCGCTGGCCAGCTTCCTCGTGCTCAACACGCCGGAGGCGAAGAAACCCAGCACGAGCGCCGGCAGGACCCCGCCTTTCC CCTTCGCCGCCCTTGCCTGCCTTGCCGTCGCCGTGGTGCTGATCGCCTCGGCCGGCGTCGACATCGCCTTGCTGCGCTCT TCGCTGCTGATCGTGCTGGGCCTCGCCGGGCTCGCGCTGTTCTTCTATATCGACGCGCTAAGGCCGCGCTCGCGACTATT TCCGGCGCGGCTGTTTTCGTGGCGCACGCCGGTCGGCGCCGGGATGACAATGGTCGCCGCCTTTTCCGTCGCGACCTGTT CCTTCGGCGTCTACGGGCCGCTGCTTTTGACCAGCCTGCACGACATTCCGCTGCTGACCACCGGCTATATCATCGCCGCC GAATCGATCGCCTGGTCGATCCTGTCGATCCTCGTCGCCAACGCGCCGCCGCAACGTGAACGGCTGATCATTGTCACCGG TGCGCTCATGATCGCGGCGGGCATCGCCGGCTTTGCCTATACGATACCCCTGGGCTCCATCCCGCTGATCCTGATATGCG CCTTGCTCCAGGGCGGCGGCTTCGGCATTGCCTGGCCGTTCCTGACCCGCGTCATCGTCGCCTCCGCTCCGGATGACGAG CAGACCATTGCTTCCGCTGCGGTGCCGACCATGCAGCGCATCGGCTATGCCGTTGGTGCCGCCCTCGCCGGCATCGTCGC CAATGCCAGCGGTTTTTCGCAAGGGCTGAACCATGACGCGGCGGCCAATGTCGCGAGCTGGCTGTTCCTTGCCTTCGTCC CGCTTGGCATCCTCGGCTGTCTCGCCGCCTTGCGGACGTCGGCGGCCGCAAACCGGCCGCTGGAAGCCATCGGCTGA
Upstream 100 bases:
>100_bases CGCTATCCGGCGCTATTGCCGCGCATGGTCCTGCCGGAAAGCCTTGTTGGCTTCTGGTGCCGTGCGCCGGCATCGAGATA TGCAGAAGCATGGGATGGAC
Downstream 100 bases:
>100_bases CAAGAGTTCAATCGAGCGCTGTCTCAGTCGACACGCAGCCGATAGCCGACACCGGTCTCGGTAGTGATGTAGCGTGGCTG GTCGGGGGTCTTCTCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTEISTNRVDWRALWASGDLARFCFISLGILLHATNETMVATVMPAMVGELAGVQLVGWSLAIYELGAIVAGAAAGRLVS YVALRTNMVVAALLYAAGALICATSPSMQLFLAGRLIEGLGGGALVSLAFVSVERLFSRAIWPQLFGIMSAIWGVAAFSG PLLGALMTEFLSWRWAFGVFTLGGATMALASFLVLNTPEAKKPSTSAGRTPPFPFAALACLAVAVVLIASAGVDIALLRS SLLIVLGLAGLALFFYIDALRPRSRLFPARLFSWRTPVGAGMTMVAAFSVATCSFGVYGPLLLTSLHDIPLLTTGYIIAA ESIAWSILSILVANAPPQRERLIIVTGALMIAAGIAGFAYTIPLGSIPLILICALLQGGGFGIAWPFLTRVIVASAPDDE QTIASAAVPTMQRIGYAVGAALAGIVANASGFSQGLNHDAAANVASWLFLAFVPLGILGCLAALRTSAAANRPLEAIG
Sequences:
>Translated_478_residues MTEISTNRVDWRALWASGDLARFCFISLGILLHATNETMVATVMPAMVGELAGVQLVGWSLAIYELGAIVAGAAAGRLVS YVALRTNMVVAALLYAAGALICATSPSMQLFLAGRLIEGLGGGALVSLAFVSVERLFSRAIWPQLFGIMSAIWGVAAFSG PLLGALMTEFLSWRWAFGVFTLGGATMALASFLVLNTPEAKKPSTSAGRTPPFPFAALACLAVAVVLIASAGVDIALLRS SLLIVLGLAGLALFFYIDALRPRSRLFPARLFSWRTPVGAGMTMVAAFSVATCSFGVYGPLLLTSLHDIPLLTTGYIIAA ESIAWSILSILVANAPPQRERLIIVTGALMIAAGIAGFAYTIPLGSIPLILICALLQGGGFGIAWPFLTRVIVASAPDDE QTIASAAVPTMQRIGYAVGAALAGIVANASGFSQGLNHDAAANVASWLFLAFVPLGILGCLAALRTSAAANRPLEAIG >Mature_477_residues TEISTNRVDWRALWASGDLARFCFISLGILLHATNETMVATVMPAMVGELAGVQLVGWSLAIYELGAIVAGAAAGRLVSY VALRTNMVVAALLYAAGALICATSPSMQLFLAGRLIEGLGGGALVSLAFVSVERLFSRAIWPQLFGIMSAIWGVAAFSGP LLGALMTEFLSWRWAFGVFTLGGATMALASFLVLNTPEAKKPSTSAGRTPPFPFAALACLAVAVVLIASAGVDIALLRSS LLIVLGLAGLALFFYIDALRPRSRLFPARLFSWRTPVGAGMTMVAAFSVATCSFGVYGPLLLTSLHDIPLLTTGYIIAAE SIAWSILSILVANAPPQRERLIIVTGALMIAAGIAGFAYTIPLGSIPLILICALLQGGGFGIAWPFLTRVIVASAPDDEQ TIASAAVPTMQRIGYAVGAALAGIVANASGFSQGLNHDAAANVASWLFLAFVPLGILGCLAALRTSAAANRPLEAIG
Specific function: Could be involved in fluoroquinolones efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322958, Length=202, Percent_Identity=27.7227722772277, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=141, Percent_Identity=28.3687943262411, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49557; Mature: 49426
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISTNRVDWRALWASGDLARFCFISLGILLHATNETMVATVMPAMVGELAGVQLVGWS CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHH LAIYELGAIVAGAAAGRLVSYVALRTNMVVAALLYAAGALICATSPSMQLFLAGRLIEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHC GGGALVSLAFVSVERLFSRAIWPQLFGIMSAIWGVAAFSGPLLGALMTEFLSWRWAFGVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLGGATMALASFLVLNTPEAKKPSTSAGRTPPFPFAALACLAVAVVLIASAGVDIALLRS HHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH SLLIVLGLAGLALFFYIDALRPRSRLFPARLFSWRTPVGAGMTMVAAFSVATCSFGVYGP HHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHH LLLTSLHDIPLLTTGYIIAAESIAWSILSILVANAPPQRERLIIVTGALMIAAGIAGFAY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHE TIPLGSIPLILICALLQGGGFGIAWPFLTRVIVASAPDDEQTIASAAVPTMQRIGYAVGA ECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ALAGIVANASGFSQGLNHDAAANVASWLFLAFVPLGILGCLAALRTSAAANRPLEAIG HHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure TEISTNRVDWRALWASGDLARFCFISLGILLHATNETMVATVMPAMVGELAGVQLVGWS CCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHH LAIYELGAIVAGAAAGRLVSYVALRTNMVVAALLYAAGALICATSPSMQLFLAGRLIEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHC GGGALVSLAFVSVERLFSRAIWPQLFGIMSAIWGVAAFSGPLLGALMTEFLSWRWAFGVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLGGATMALASFLVLNTPEAKKPSTSAGRTPPFPFAALACLAVAVVLIASAGVDIALLRS HHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH SLLIVLGLAGLALFFYIDALRPRSRLFPARLFSWRTPVGAGMTMVAAFSVATCSFGVYGP HHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHH LLLTSLHDIPLLTTGYIIAAESIAWSILSILVANAPPQRERLIIVTGALMIAAGIAGFAY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHE TIPLGSIPLILICALLQGGGFGIAWPFLTRVIVASAPDDEQTIASAAVPTMQRIGYAVGA ECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ALAGIVANASGFSQGLNHDAAANVASWLFLAFVPLGILGCLAALRTSAAANRPLEAIG HHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]