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The map label for this gene is 13472728

Identifier: 13472728

GI number: 13472728

Start: 2503419

End: 2503805

Strand: Direct

Name: 13472728

Synonym: mlr3116

Alternate gene names: NA

Gene position: 2503419-2503805 (Clockwise)

Preceding gene: 13472727

Following gene: 13472729

Centisome position: 35.58

GC content: 61.24

Gene sequence:

>387_bases
ATGATGCTGATCCGAACCTATGTGGCCGCGAGCGCGATCGAGGGCGTTGGCATGTTCGCCGCCGAGCCGATCCGGAAAGG
CGCCTCGATCTGGCGGCTTAACCCGGATTTCGACCGGCTGATCCCGATGGACGAATACGAGGCCGCACCCCAGCCTCTGA
AGGAATTGCTCGACCGTTATGCCTATCCGAGCCCGGATAGGCCGGGCTTCATGGTCTATGAGGTCGACAATGGCCGCTTC
ATGAACCATTCGGCGACGCCGAATACCGACTTTTCGCAATATGGCGGCGCGACAGCGACCCGCGACATCGCCGCCGGCGA
AGAGATCACTTGTGACTACGGCGAATTCTTCGAGGATTTCGAGCGGCTGCACCTGGCCACGGCGTAG

Upstream 100 bases:

>100_bases
CGGCGAACAGACCGGTTCGCCGCTTTGACGCAGGCAGCCGGTCTTGCTTTTTCCGCGCGATTTGGCGATTCCGTTCCCTG
TCGAAACGGGTCCCGAAACC

Downstream 100 bases:

>100_bases
TTGGCGCCCTATGTCGGAGCGACAGTGGCAATTTGGCTGTTGTCTTGCATTTCGACTGTGGACAGCGCGGCCTGATTCTG
CTATCAGCCGCCACAATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: SET Domain-Containing Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MMLIRTYVAASAIEGVGMFAAEPIRKGASIWRLNPDFDRLIPMDEYEAAPQPLKELLDRYAYPSPDRPGFMVYEVDNGRF
MNHSATPNTDFSQYGGATATRDIAAGEEITCDYGEFFEDFERLHLATA

Sequences:

>Translated_128_residues
MMLIRTYVAASAIEGVGMFAAEPIRKGASIWRLNPDFDRLIPMDEYEAAPQPLKELLDRYAYPSPDRPGFMVYEVDNGRF
MNHSATPNTDFSQYGGATATRDIAAGEEITCDYGEFFEDFERLHLATA
>Mature_128_residues
MMLIRTYVAASAIEGVGMFAAEPIRKGASIWRLNPDFDRLIPMDEYEAAPQPLKELLDRYAYPSPDRPGFMVYEVDNGRF
MNHSATPNTDFSQYGGATATRDIAAGEEITCDYGEFFEDFERLHLATA

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14396; Mature: 14396

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLIRTYVAASAIEGVGMFAAEPIRKGASIWRLNPDFDRLIPMDEYEAAPQPLKELLDRY
CEEHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHCCCCCHHCCCHHHHHHHHHHH
AYPSPDRPGFMVYEVDNGRFMNHSATPNTDFSQYGGATATRDIAAGEEITCDYGEFFEDF
CCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEECCHHHHHHHH
ERLHLATA
HHHHHCCC
>Mature Secondary Structure
MMLIRTYVAASAIEGVGMFAAEPIRKGASIWRLNPDFDRLIPMDEYEAAPQPLKELLDRY
CEEHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHHCCCCCHHCCCHHHHHHHHHHH
AYPSPDRPGFMVYEVDNGRFMNHSATPNTDFSQYGGATATRDIAAGEEITCDYGEFFEDF
CCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCEECCHHHHHHHH
ERLHLATA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA