Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472680

Identifier: 13472680

GI number: 13472680

Start: 2456036

End: 2457310

Strand: Direct

Name: 13472680

Synonym: mlr3050

Alternate gene names: NA

Gene position: 2456036-2457310 (Clockwise)

Preceding gene: 13472679

Following gene: 13472681

Centisome position: 34.91

GC content: 63.22

Gene sequence:

>1275_bases
ATGCAACAAGGGAGGAAGTACATGTTGCGCAAACTGCTTATCGGAACGGCTCTCGCGACGAGCTTTGCCTTCTCGGCGCA
TGCCGCGGACGTCAAGGAAGTGCAGATGCTGCATTGGTGGACGTCGGGCGGTGAAGCGGCCGCCCTCAACGTGCTGAAGG
GCGACCTGGCCAAGGAAGGCTTTGCCTGGAAGGACGTGCCGGTGGCCGGCGGCGGCGGCGACGCTGCCATGACCGCGCTG
AAGGCGATGGTCGCGGCCGGCAATTACCCGACCGCCTCGCAGATGCTCGGCTACACAGTGCTCGACTATGCGGCGGCCGG
CGTCATGGGCGACCTGACCGAGACGGCGAAGAAGGAAGGCTGGGACAAGTCGGTTCCGGCAGCCCTGCAGAAGTTCTCGG
TCTATGAAGGCAAGTGGGTCGCGGCTCCGGTCAACGTCCACTCGGTCAACTGGCTGTGGATCAACAAGGCCGTCATGGAC
AAGATCGGCGGCACCGAGCCGAAGACCTTCGACGACTTCGTCGCCCTGCTCGACAAGGCCAAGGCCGCGGGCGTGATCCC
GCTCGCTCTCGGCGGTCAGAACTGGCAGGAAGCCACCATGTTCGACTCGGTCGTGCTGTCGACCGGCGGGCCTGAGTTCT
ACAAGAAGGCCTTCAACGACCTCGACGACGCTTCGCTCAAGTCTGACACGATGAAGAAGTCGTTCGACAACCTCGCCAAG
CTCGTCACCTATGTCGACCCGAACTTCTCGGGCCGCGACTGGAACCTTGCCACCGCCATGGTCATCAAGGGCGATGCCCT
GGTGCAGGTCATGGGCGACTGGGCCAAGGGTGAGTTCCACGCCGCCAAGAAGACCCCGGGCACCGACTTCCTGTGCTATC
GCTTCCCGGGCACCGACGGCTCCGTGATCTACAACTCCGACATGTTCGGCATGTTCAACGTTCCGGACGACCGCAAGGCC
GCCCAGGTCGCACTGGCCACCGCCACCTTGTCGAAGAGCTTCCAGTCGGCCTTCAACGTCGTCAAGGGTTCGGTTCCGGC
CCGGACCGACGTTCCGGACACCGACTTCGACGCTTGCGGCAAGAAGGGCATCGCCGACCTGAAGAAAGCCAATGAAGGCG
GCACGCTGTTCGGCTCGCTGGCCCAGGGCTATGGCGCCCCGCCGGCTGTCGCCAATGCCTACAAGGATGTCGTCTCGAAG
TTCGTCCATGGTCAGATCAAGACTTCGGACGAGGCCGTGACCGAACTGGTCAAGGCGATCGACGACGCCAAGTAA

Upstream 100 bases:

>100_bases
TATACCGAGGAAAAGACAATCCAGTTTCATCGCGGCCAGCGCACCGGATGGTGGGTCGGCTGAGTTGGGAAGAACCCGGT
GGGCTTCCACCGGTCGTTTA

Downstream 100 bases:

>100_bases
GCGCAACGTTCGAAATCACCTTCCCCGCTTCGGCGGGGAAGGTTTTATCCCAGGATTGGCCGGCTCGACACCATGCCGAC
TGAAGACCCGTATGCACGGG

Product: maltose-binding protein component of ABC sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL
KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD
KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK
LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA
AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK
FVHGQIKTSDEAVTELVKAIDDAK

Sequences:

>Translated_424_residues
MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL
KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD
KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK
LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA
AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK
FVHGQIKTSDEAVTELVKAIDDAK
>Mature_424_residues
MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEGFAWKDVPVAGGGGDAAMTAL
KAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEGWDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMD
KIGGTEPKTFDDFVALLDKAKAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK
LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDGSVIYNSDMFGMFNVPDDRKA
AQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACGKKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSK
FVHGQIKTSDEAVTELVKAIDDAK

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45212; Mature: 45212

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEHHHHHHHHHHCC
FAWKDVPVAGGGGDAAMTALKAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMDKIGGTEPKTFDDFVALLDKA
CCCHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHH
KAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK
HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDG
HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCC
SVIYNSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACG
CEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
KKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSKFVHGQIKTSDEAVTELVKAI
CCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DDAK
CCCC
>Mature Secondary Structure
MQQGRKYMLRKLLIGTALATSFAFSAHAADVKEVQMLHWWTSGGEAAALNVLKGDLAKEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCEEHHHHHHHHHHCC
FAWKDVPVAGGGGDAAMTALKAMVAAGNYPTASQMLGYTVLDYAAAGVMGDLTETAKKEG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WDKSVPAALQKFSVYEGKWVAAPVNVHSVNWLWINKAVMDKIGGTEPKTFDDFVALLDKA
CCCHHHHHHHHHHCCCCCEEEECCEEEEEEEEEECHHHHHHCCCCCCCCHHHHHHHHHHH
KAAGVIPLALGGQNWQEATMFDSVVLSTGGPEFYKKAFNDLDDASLKSDTMKKSFDNLAK
HHCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LVTYVDPNFSGRDWNLATAMVIKGDALVQVMGDWAKGEFHAAKKTPGTDFLCYRFPGTDG
HHHHCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCEEEEECCCCCC
SVIYNSDMFGMFNVPDDRKAAQVALATATLSKSFQSAFNVVKGSVPARTDVPDTDFDACG
CEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHC
KKGIADLKKANEGGTLFGSLAQGYGAPPAVANAYKDVVSKFVHGQIKTSDEAVTELVKAI
CCCHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
DDAK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]