| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is malI [H]
Identifier: 13472675
GI number: 13472675
Start: 2450035
End: 2451093
Strand: Direct
Name: malI [H]
Synonym: mlr3045
Alternate gene names: 13472675
Gene position: 2450035-2451093 (Clockwise)
Preceding gene: 13472672
Following gene: 13472676
Centisome position: 34.82
GC content: 65.91
Gene sequence:
>1059_bases ATGGCCAGCCGGGCCAAGGCCACGATATTCGACATTGCCCGTGAGGCGGGCGTGTCCAAATCTACGGTATCGCTCGTGCT CCAGGGCAGCGGGCTGATCCGGCCTGAAACCGCGGTCAAGGTGCGCAAGGCGATCGAGGATGTCGGCTATGTCTACAACC GCGGCGCCGCCAATCTGCGCAAGGCCCATTCCAATGTCATCGGCATGGTCATCAACGACCTCACCAACCCGTTCTTCGCC GAGCTGGCGGTCGGCATGGAACGCGTCTTCCAGTCGGCCGGCATCGTGCCCTTCATCGCCAATACGGCGGAGAATCCGGT GCGCCAGGAAGAGGTGCTGAAGTCGCTGATGGAACAAGGCGTCGCCGGCCTCATCGTGTCACCGGCGCGCGGCACCACGC CAGGCGCTTTCCGGCGGCTGGAGTTGGCGGGCGTGCCGGTGGTCTTCGCCATGCGCCGCCTGCCTGAAAGCCGCATCCCT GTGATCGCGCCCGACAATCATCGCGGCGCCTATCTTGCCGCGGCTCATCTGATCGCCAAAGGACATCGCCGGCTCGCCTT CTTCGGCGGCACCTCGGATCTGGTGGTCTATCAGGAACGGCTGGGCGGCTTTCGCGAAGCCTGCGAGACGTTGGGCATCG CTGCCCGCGATGTGCTGGTCGTCGAGGGCGAAACCAACCGCAGAGGCGGCCTCGCTTGCCTGGAAACCGCCCTTACAATG GCTGAGCCTCCGACCGCGGCCCTCTGCTTCAACGATGCCGTCGCGTTTGGCGTGATGCTGGCGTTGCGCAAGCGTCGGCT TGAGCCGGGACCGGATTTCGCCGTCGTCGGCTTCGACGATGTGGTCGAGGCCGAACACTACATGCCGGCGCTGACCAGCG TCGCGGTGGATACAGCCGGCCTGGGCGAGCGCGCCGCCCACGTCATGCTCAAGCTGATCCAGTCGCGCACCACGCGGGCC GAAGACCATATCGGCGCGGTCAATCTCGTGGTCAGGGAAAGCTGCGGTCCGGATCTCCGCACGCGAAACAGGCTGGCGGG AACGGGAGGCGCCGCGTGA
Upstream 100 bases:
>100_bases AGGTTTGCGGACTGAGAAAAATTCGCGGTTGACTCAGGATTGAACCAAGGATTAGAACGTTCCAATAGATTGGTTGGGAA AACTGGGAGGACGCATCGAT
Downstream 100 bases:
>100_bases GTGTCAAATGGGGGCTGATCGGCGCCAGCACGATCGCCAGGCAATTCATGATCAACGCCATTCGCGCGCAAGAGGGGGGC GAGATCGCGGCGGTGATGAG
Product: LacI family transcription regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MASRAKATIFDIAREAGVSKSTVSLVLQGSGLIRPETAVKVRKAIEDVGYVYNRGAANLRKAHSNVIGMVINDLTNPFFA ELAVGMERVFQSAGIVPFIANTAENPVRQEEVLKSLMEQGVAGLIVSPARGTTPGAFRRLELAGVPVVFAMRRLPESRIP VIAPDNHRGAYLAAAHLIAKGHRRLAFFGGTSDLVVYQERLGGFREACETLGIAARDVLVVEGETNRRGGLACLETALTM AEPPTAALCFNDAVAFGVMLALRKRRLEPGPDFAVVGFDDVVEAEHYMPALTSVAVDTAGLGERAAHVMLKLIQSRTTRA EDHIGAVNLVVRESCGPDLRTRNRLAGTGGAA
Sequences:
>Translated_352_residues MASRAKATIFDIAREAGVSKSTVSLVLQGSGLIRPETAVKVRKAIEDVGYVYNRGAANLRKAHSNVIGMVINDLTNPFFA ELAVGMERVFQSAGIVPFIANTAENPVRQEEVLKSLMEQGVAGLIVSPARGTTPGAFRRLELAGVPVVFAMRRLPESRIP VIAPDNHRGAYLAAAHLIAKGHRRLAFFGGTSDLVVYQERLGGFREACETLGIAARDVLVVEGETNRRGGLACLETALTM AEPPTAALCFNDAVAFGVMLALRKRRLEPGPDFAVVGFDDVVEAEHYMPALTSVAVDTAGLGERAAHVMLKLIQSRTTRA EDHIGAVNLVVRESCGPDLRTRNRLAGTGGAA >Mature_351_residues ASRAKATIFDIAREAGVSKSTVSLVLQGSGLIRPETAVKVRKAIEDVGYVYNRGAANLRKAHSNVIGMVINDLTNPFFAE LAVGMERVFQSAGIVPFIANTAENPVRQEEVLKSLMEQGVAGLIVSPARGTTPGAFRRLELAGVPVVFAMRRLPESRIPV IAPDNHRGAYLAAAHLIAKGHRRLAFFGGTSDLVVYQERLGGFREACETLGIAARDVLVVEGETNRRGGLACLETALTMA EPPTAALCFNDAVAFGVMLALRKRRLEPGPDFAVVGFDDVVEAEHYMPALTSVAVDTAGLGERAAHVMLKLIQSRTTRAE DHIGAVNLVVRESCGPDLRTRNRLAGTGGAA
Specific function: Repressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787906, Length=293, Percent_Identity=34.1296928327645, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1789202, Length=289, Percent_Identity=31.8339100346021, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790194, Length=315, Percent_Identity=32.0634920634921, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1790369, Length=328, Percent_Identity=24.6951219512195, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789068, Length=291, Percent_Identity=29.2096219931272, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1787948, Length=311, Percent_Identity=27.6527331189711, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI48994940, Length=321, Percent_Identity=27.4143302180685, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1788474, Length=309, Percent_Identity=28.1553398058252, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1786540, Length=339, Percent_Identity=26.8436578171091, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1790715, Length=312, Percent_Identity=25.3205128205128, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1787580, Length=316, Percent_Identity=26.8987341772152, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786268, Length=304, Percent_Identity=25.6578947368421, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790192, Length=232, Percent_Identity=26.7241379310345, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37563; Mature: 37432
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRAKATIFDIAREAGVSKSTVSLVLQGSGLIRPETAVKVRKAIEDVGYVYNRGAANLR CCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH KAHSNVIGMVINDLTNPFFAELAVGMERVFQSAGIVPFIANTAENPVRQEEVLKSLMEQG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCC VAGLIVSPARGTTPGAFRRLELAGVPVVFAMRRLPESRIPVIAPDNHRGAYLAAAHLIAK CCEEEEECCCCCCCHHHHEEHHCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHC GHRRLAFFGGTSDLVVYQERLGGFREACETLGIAARDVLVVEGETNRRGGLACLETALTM CCCEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH AEPPTAALCFNDAVAFGVMLALRKRRLEPGPDFAVVGFDDVVEAEHYMPALTSVAVDTAG CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC LGERAAHVMLKLIQSRTTRAEDHIGAVNLVVRESCGPDLRTRNRLAGTGGAA CHHHHHHHHHHHHHHHCCCHHHHCCHHHEEEECCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure ASRAKATIFDIAREAGVSKSTVSLVLQGSGLIRPETAVKVRKAIEDVGYVYNRGAANLR CCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH KAHSNVIGMVINDLTNPFFAELAVGMERVFQSAGIVPFIANTAENPVRQEEVLKSLMEQG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCC VAGLIVSPARGTTPGAFRRLELAGVPVVFAMRRLPESRIPVIAPDNHRGAYLAAAHLIAK CCEEEEECCCCCCCHHHHEEHHCCCHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHC GHRRLAFFGGTSDLVVYQERLGGFREACETLGIAARDVLVVEGETNRRGGLACLETALTM CCCEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHH AEPPTAALCFNDAVAFGVMLALRKRRLEPGPDFAVVGFDDVVEAEHYMPALTSVAVDTAG CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCC LGERAAHVMLKLIQSRTTRAEDHIGAVNLVVRESCGPDLRTRNRLAGTGGAA CHHHHHHHHHHHHHHHCCCHHHHCCHHHEEEECCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670898; 1856179; 9097039; 9278503 [H]