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The map label for this gene is omp10 [H]

Identifier: 13472650

GI number: 13472650

Start: 2419395

End: 2419895

Strand: Direct

Name: omp10 [H]

Synonym: mlr3016

Alternate gene names: 13472650

Gene position: 2419395-2419895 (Clockwise)

Preceding gene: 13472649

Following gene: 13472651

Centisome position: 34.39

GC content: 63.87

Gene sequence:

>501_bases
ATGCGGCCTGGGGCAGCGTGCGTCTTGCGGGACGCCCGCCCGTTCCAGCACTTTGGACGTTCGCATCGTGCCTGCCAAAA
TCGAAACCGATTTTTGGACCGATGCGTTTGGAGAGGATTTCAGATGACTATTGCGCGCAAAGTTCTTTCGATCGGCATGG
CGGGCTCCTTTGCCATGATGCTCGCTGCCTGCACCACAAGCGGCCCCGACGCACCGCCGATGGCGGCCGCGCCGAAAGGC
GTCGAGGGTTCCTGGATCGATGCCAAGGGCACCGGCCTGTCGACCTTCACCGCTGGCAAGTTCGCGACCGTCGCCACCGA
CACCGGCCAGAAGCTCGCCGACGGCAGCTACACGATGACCGGCGCCACGTCGGTCGAGATCAACGGGACGTCGCTGATCC
GCCAGACGCCGGTCAGCTTCAACTGCCTGCTGATCTCCACCAGCCAGCTGAACTGCACCAGCTCGTCCGGCCAGAACTTC
GTGCTGACGCGACGCACCTGA

Upstream 100 bases:

>100_bases
GCAGCGATCCGTGGCAATTCCGCAACATCCTCGTGCGATAGCACCTCGCGCACTATGCGCCATTGCCTTGCAATCGCCCG
GAAATCGGGCGATTGAAGAG

Downstream 100 bases:

>100_bases
AACCGGCGAACGCCGGACTCATCGAGGACGGCGGCCGATTGGCCGCCGTCCTTTTTTGTGCTTGCAGATAGTGGCGGCAT
TTCCGCTTGCGTCAGCCGGA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRPGAACVLRDARPFQHFGRSHRACQNRNRFLDRCVWRGFQMTIARKVLSIGMAGSFAMMLAACTTSGPDAPPMAAAPKG
VEGSWIDAKGTGLSTFTAGKFATVATDTGQKLADGSYTMTGATSVEINGTSLIRQTPVSFNCLLISTSQLNCTSSSGQNF
VLTRRT

Sequences:

>Translated_166_residues
MRPGAACVLRDARPFQHFGRSHRACQNRNRFLDRCVWRGFQMTIARKVLSIGMAGSFAMMLAACTTSGPDAPPMAAAPKG
VEGSWIDAKGTGLSTFTAGKFATVATDTGQKLADGSYTMTGATSVEINGTSLIRQTPVSFNCLLISTSQLNCTSSSGQNF
VLTRRT
>Mature_166_residues
MRPGAACVLRDARPFQHFGRSHRACQNRNRFLDRCVWRGFQMTIARKVLSIGMAGSFAMMLAACTTSGPDAPPMAAAPKG
VEGSWIDAKGTGLSTFTAGKFATVATDTGQKLADGSYTMTGATSVEINGTSLIRQTPVSFNCLLISTSQLNCTSSSGQNF
VLTRRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp10 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17677; Mature: 17677

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGAACVLRDARPFQHFGRSHRACQNRNRFLDRCVWRGFQMTIARKVLSIGMAGSFAMM
CCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
LAACTTSGPDAPPMAAAPKGVEGSWIDAKGTGLSTFTAGKFATVATDTGQKLADGSYTMT
HHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEC
GATSVEINGTSLIRQTPVSFNCLLISTSQLNCTSSSGQNFVLTRRT
CCEEEEECCCEEEEECCCCEEEEEEECCCCEEECCCCCEEEEEECC
>Mature Secondary Structure
MRPGAACVLRDARPFQHFGRSHRACQNRNRFLDRCVWRGFQMTIARKVLSIGMAGSFAMM
CCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
LAACTTSGPDAPPMAAAPKGVEGSWIDAKGTGLSTFTAGKFATVATDTGQKLADGSYTMT
HHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEC
GATSVEINGTSLIRQTPVSFNCLLISTSQLNCTSSSGQNFVLTRRT
CCEEEEECCCEEEEECCCCEEEEEEECCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]