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The map label for this gene is fliR [H]

Identifier: 13472611

GI number: 13472611

Start: 2381997

End: 2382749

Strand: Direct

Name: fliR [H]

Synonym: mlr2958

Alternate gene names: 13472611

Gene position: 2381997-2382749 (Clockwise)

Preceding gene: 13472610

Following gene: 13472612

Centisome position: 33.85

GC content: 62.82

Gene sequence:

>753_bases
GTGAGCGTTCTTTCGCAGAGCGTCGTCATCGCGGCGTTCCTCGCCTTCTGCCGCATCGGCGCCTGCTTCATGCTGATGCC
GGGCCTGTCCAGCGCCCGTGTGCCGGTGCAGGTCAGGCTGTTCGTGGCGGTCGCCGCCACCGGCGGCCTGCTCGCCTTCC
TGTGGGATCGCATCATTCCCTTCGTCGATCCGCGCCCGCAGATCCTGGTGCCAATGATCATCTCGGAGCTGCTGATCGGC
GGACTGATCGGCGCCATGACCAGGCTCTACATGGAAGCGCTGCGCTTCATGGGCTCGGCCATCGCCATGCTGATCGGCTA
TGGCGGCTCGGGCGGTCCGGCGATCGAGGAACCGGAACCGCAGGCGGCCCTTGCCGCCATCATCTCGTTCTCCGCGCTGT
TGATGCTGTTCGTCTTCGACTTCGACCACGAGATCGTCCGCGCTTTGGTGGCGTCCTACACAGTCGCGCCGGTCAACGTC
TTCTTCAACCCGCAGGCAGCCCTCGTCGACATCACCGACACCGTGTCGGACACCTTCTTCCTGGTCATCCGCCTCGGCAG
CCCGTTCGTCGCCTATGCCATCCTGGTCAATCTGACGATCGGCTTCGTCAACAAGCTGACCCCGCAGATTCCGATCTATT
TCATCTCCCAGCCCTTCGTCATCGCCGGCGGCATGATCATTTTCTATTTCGCCATCGGCACCATGCTGTCGCTGTTCGTC
GATGGCTTCGTCGACCTGACTTTGGCGAGGTGA

Upstream 100 bases:

>100_bases
ATGTGCGCATGATCATCGAGCGCCTGTTCACCACGCTGCCGGTGCTCTCCCATGTCGAAATCGCCAAGGGCGTCGAGATC
AGGGTGCTCGGGACCATATC

Downstream 100 bases:

>100_bases
GATGAGCTCGCGCAGGGACCGCCTGAAGAAACTGGTCAAGGTGCAGGAACAGTTGAAGGCGCTGCACGAGACCCGCCACG
CCACCTTCCTGGCCGCGGCA

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSVLSQSVVIAAFLAFCRIGACFMLMPGLSSARVPVQVRLFVAVAATGGLLAFLWDRIIPFVDPRPQILVPMIISELLIG
GLIGAMTRLYMEALRFMGSAIAMLIGYGGSGGPAIEEPEPQAALAAIISFSALLMLFVFDFDHEIVRALVASYTVAPVNV
FFNPQAALVDITDTVSDTFFLVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAIGTMLSLFV
DGFVDLTLAR

Sequences:

>Translated_250_residues
MSVLSQSVVIAAFLAFCRIGACFMLMPGLSSARVPVQVRLFVAVAATGGLLAFLWDRIIPFVDPRPQILVPMIISELLIG
GLIGAMTRLYMEALRFMGSAIAMLIGYGGSGGPAIEEPEPQAALAAIISFSALLMLFVFDFDHEIVRALVASYTVAPVNV
FFNPQAALVDITDTVSDTFFLVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAIGTMLSLFV
DGFVDLTLAR
>Mature_249_residues
SVLSQSVVIAAFLAFCRIGACFMLMPGLSSARVPVQVRLFVAVAATGGLLAFLWDRIIPFVDPRPQILVPMIISELLIGG
LIGAMTRLYMEALRFMGSAIAMLIGYGGSGGPAIEEPEPQAALAAIISFSALLMLFVFDFDHEIVRALVASYTVAPVNVF
FNPQAALVDITDTVSDTFFLVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAIGTMLSLFVD
GFVDLTLAR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26944; Mature: 26812

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLSQSVVIAAFLAFCRIGACFMLMPGLSSARVPVQVRLFVAVAATGGLLAFLWDRIIP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC
FVDPRPQILVPMIISELLIGGLIGAMTRLYMEALRFMGSAIAMLIGYGGSGGPAIEEPEP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
QAALAAIISFSALLMLFVFDFDHEIVRALVASYTVAPVNVFFNPQAALVDITDTVSDTFF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEECCCEEEEEEHHHHHHHEE
LVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAIGTMLSLFV
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
DGFVDLTLAR
HHHHHHEECC
>Mature Secondary Structure 
SVLSQSVVIAAFLAFCRIGACFMLMPGLSSARVPVQVRLFVAVAATGGLLAFLWDRIIP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC
FVDPRPQILVPMIISELLIGGLIGAMTRLYMEALRFMGSAIAMLIGYGGSGGPAIEEPEP
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
QAALAAIISFSALLMLFVFDFDHEIVRALVASYTVAPVNVFFNPQAALVDITDTVSDTFF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEECCCEEEEEEHHHHHHHEE
LVIRLGSPFVAYAILVNLTIGFVNKLTPQIPIYFISQPFVIAGGMIIFYFAIGTMLSLFV
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
DGFVDLTLAR
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]