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The map label for this gene is potD [C]

Identifier: 13472605

GI number: 13472605

Start: 2374041

End: 2375117

Strand: Reverse

Name: potD [C]

Synonym: mll2951

Alternate gene names: 13472605

Gene position: 2375117-2374041 (Counterclockwise)

Preceding gene: 13472606

Following gene: 13472604

Centisome position: 33.76

GC content: 61.75

Gene sequence:

>1077_bases
ATGTTTAGATCGAGATTTGCAGGCCTTGGCGCCATTCTGGCGCTTGGCGTTGTAGCCGGCGCGGCCTTTGCGCAGGAGAA
GCCGGTCGCCGGCGAGGTGAAGGAAGGTTCGCTGAAGGGCAAGACGCTGACGTTCGTTTCCTATGGCGGCATCTACCAGG
ACGGCCAGGCGGCCGCGCTGAAGGAGTTCGTCGACAAGTCCGGCGTCAAGCTGCTCAATGACGGACCGACCGAGATCGCC
AAGCTGCAGGCGCAGGTCGAGTCCGGCAATGTGGCCTGGGACGTCGTCGACACCGACGACCTGCCGCCTTACGTCTATTG
CGGCAAGCTGTTCCAGAAGCTGGATCTGACGAAGCTCGACGTCTCGAAAATCCCGGAAGGCCAGGTCGGCGAATGCTCGG
TGCCGGCGATGAACTACGGCGTCGTGCTGATGTACAACAAGGAGAAGTACAAGGATAATCCGCCCAAGAGCTGGGCAGAC
TTCTTCGATACGGCAAAGTTCCCGGGCGTGCGCGGAATCGACGGCTCCGGCAGCCCGACGGGCGGCTTGCTGGAACAGGC
GTTCAAGGTTGCCGGCGGCGATCCGAAGGCGATGACAGTGGCCGATATCGACAAGGCCATCGATGTGGTCCGCAAGCTCG
GCCCCGATACCATTTTCTGGAAGACGGGTGCCGAATCGCAGCAACTCGCCGAATCCGGCGAGGCCGACATGCTGATGATG
TGGACGGGCCGCGCCATGACCGCGGTCAAGAACGGCGCCAAATATGCGCCGGCCTGGCAGGACTGGCTGGTGGTGATGGA
CCAGATGACTATCCCGGTCGGCGTCAAGGACACGGATGCATCCTACGCGCTGCTCAATGCCTATCTCGGCAAGCATGCAC
AGGAGGTCCTGGCGGAGCAGACGTCCTACACGCCGATCAACAGCGACGCGCAGCCCAAAGTCGACGCTTCAGTCTCCGCC
TTCCTGACCAACACGCCTGAACGTCAGAAGCAGGGCTACAAGCAGAACTTCAAGTTCTGGGTCCCGAACTTCGCGGTGGC
TCAGGAGAAGTGGTCGGCGCTGATGGCCGGCAACTGA

Upstream 100 bases:

>100_bases
CCTCGGTGCGCGCCGAACTCGAACAATACACGGCCTGGAAACCGCTCGCGGCCAGGTAGGTCCTATCCAAAACGCGGGCA
TGAATGGGAGAGTTAGTGTG

Downstream 100 bases:

>100_bases
GCGAGCGTCGCAGAGGCAGGCGGTGAGCGCGTCCGACCCGACAAACGGATCCGTTGCCCAACCCGCCGCCGAAGGGCGGC
CGGGGTGGGCGTGGCGGCCG

Product: ABC transporter, binding protein component

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MFRSRFAGLGAILALGVVAGAAFAQEKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQAAALKEFVDKSGVKLLNDGPTEIA
KLQAQVESGNVAWDVVDTDDLPPYVYCGKLFQKLDLTKLDVSKIPEGQVGECSVPAMNYGVVLMYNKEKYKDNPPKSWAD
FFDTAKFPGVRGIDGSGSPTGGLLEQAFKVAGGDPKAMTVADIDKAIDVVRKLGPDTIFWKTGAESQQLAESGEADMLMM
WTGRAMTAVKNGAKYAPAWQDWLVVMDQMTIPVGVKDTDASYALLNAYLGKHAQEVLAEQTSYTPINSDAQPKVDASVSA
FLTNTPERQKQGYKQNFKFWVPNFAVAQEKWSALMAGN

Sequences:

>Translated_358_residues
MFRSRFAGLGAILALGVVAGAAFAQEKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQAAALKEFVDKSGVKLLNDGPTEIA
KLQAQVESGNVAWDVVDTDDLPPYVYCGKLFQKLDLTKLDVSKIPEGQVGECSVPAMNYGVVLMYNKEKYKDNPPKSWAD
FFDTAKFPGVRGIDGSGSPTGGLLEQAFKVAGGDPKAMTVADIDKAIDVVRKLGPDTIFWKTGAESQQLAESGEADMLMM
WTGRAMTAVKNGAKYAPAWQDWLVVMDQMTIPVGVKDTDASYALLNAYLGKHAQEVLAEQTSYTPINSDAQPKVDASVSA
FLTNTPERQKQGYKQNFKFWVPNFAVAQEKWSALMAGN
>Mature_358_residues
MFRSRFAGLGAILALGVVAGAAFAQEKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQAAALKEFVDKSGVKLLNDGPTEIA
KLQAQVESGNVAWDVVDTDDLPPYVYCGKLFQKLDLTKLDVSKIPEGQVGECSVPAMNYGVVLMYNKEKYKDNPPKSWAD
FFDTAKFPGVRGIDGSGSPTGGLLEQAFKVAGGDPKAMTVADIDKAIDVVRKLGPDTIFWKTGAESQQLAESGEADMLMM
WTGRAMTAVKNGAKYAPAWQDWLVVMDQMTIPVGVKDTDASYALLNAYLGKHAQEVLAEQTSYTPINSDAQPKVDASVSA
FLTNTPERQKQGYKQNFKFWVPNFAVAQEKWSALMAGN

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38666; Mature: 38666

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSRFAGLGAILALGVVAGAAFAQEKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQAAAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHH
KEFVDKSGVKLLNDGPTEIAKLQAQVESGNVAWDVVDTDDLPPYVYCGKLFQKLDLTKLD
HHHHHHCCCEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
VSKIPEGQVGECSVPAMNYGVVLMYNKEKYKDNPPKSWADFFDTAKFPGVRGIDGSGSPT
HHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GGLLEQAFKVAGGDPKAMTVADIDKAIDVVRKLGPDTIFWKTGAESQQLAESGEADMLMM
HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEE
WTGRAMTAVKNGAKYAPAWQDWLVVMDQMTIPVGVKDTDASYALLNAYLGKHAQEVLAEQ
ECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TSYTPINSDAQPKVDASVSAFLTNTPERQKQGYKQNFKFWVPNFAVAQEKWSALMAGN
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCHHCCCCEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRSRFAGLGAILALGVVAGAAFAQEKPVAGEVKEGSLKGKTLTFVSYGGIYQDGQAAAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECCCHHHHH
KEFVDKSGVKLLNDGPTEIAKLQAQVESGNVAWDVVDTDDLPPYVYCGKLFQKLDLTKLD
HHHHHHCCCEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
VSKIPEGQVGECSVPAMNYGVVLMYNKEKYKDNPPKSWADFFDTAKFPGVRGIDGSGSPT
HHHCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GGLLEQAFKVAGGDPKAMTVADIDKAIDVVRKLGPDTIFWKTGAESQQLAESGEADMLMM
HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCEEEE
WTGRAMTAVKNGAKYAPAWQDWLVVMDQMTIPVGVKDTDASYALLNAYLGKHAQEVLAEQ
ECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TSYTPINSDAQPKVDASVSAFLTNTPERQKQGYKQNFKFWVPNFAVAQEKWSALMAGN
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCHHCCCCEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA