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The map label for this gene is motD [H]

Identifier: 13472589

GI number: 13472589

Start: 2359361

End: 2360728

Strand: Direct

Name: motD [H]

Synonym: mlr2933

Alternate gene names: 13472589

Gene position: 2359361-2360728 (Clockwise)

Preceding gene: 13472588

Following gene: 13472590

Centisome position: 33.53

GC content: 66.81

Gene sequence:

>1368_bases
ATGACCCCAAGCCTCGGCCCGGCCCTGCCAGGATTTACCGCCGCCCGCACGGCGGAGCAGCCGGCTACTCCCGGCAAGAA
GGATGATGCTGGTTTCGGCAAGATGGTGCATGGCGGCGCGGGCCAGGCGGAAAAGCAGCCTACGACCGAACGCGGCGCGC
GCGATCCGGGCTGGAGCAAGCTTGCCGCCGGCCTGGCGGCACAGGCAGGCGAGGACGAGCCGATGCCGGCCGGTAAGGCG
AGGACCGCGCCCACTGGAGCGGCGGCAGCGAAATCCATGAAGGACGGCAAGGACATTGAGGCGGACAAGGACGCCGATAC
CGAAGCGCCAGCGACCGACGCCGGCGCAACGCCGCTCGACGATCATCTGCCTTTGCTGATGGCGTTTCATGACCTGCGCC
ATTTCTCGACATCGGCCAAATCAGCCGACGCAGGCGAGACCGGACAGGGACCGGCGCTCGACGGGCAGCTCTTGTCGAAA
GCCTATCGGCCGACATCCGGTCACGACGACCTCGAACCGATGCCGAAGCCCGAGCGGGTCTCACTCGTCGACGGGCCGCT
GACGAAGCTCGAGTCCGCCCGCGACGCAAGCGCCGGCACTGGCGCACCACGGCGTGACAATGCAATCGCCGCTGGCCCGC
TGCCCGAGACGACAACCGCCGAGGTGCCGGGCGTCGAGCCGAAGCAGGCGGCGCCACAGCTGAAGTCCATCGCCGACGTC
CAGTCCTCGTTGCGGTCCGAGCCAGGAAAACCGCTCTCGGCCCAGGCGCGCGTCGACGTCGTTTCCGAGCGCAGCTTCCC
TGCCCCGCCGCAGGCGCCGATGAGCCAGGCAGCACTCAACGTAATCAACGCCGTAGCGGCTGATGTTGGCCCGCAGCAGG
CGTTTTCGACAGCCTCCGCGACCACCCATATGGCCGGCTCTGTTGCCGTTCCGACACACGTGTTGAAGATCGAACTTCAC
CCGGCCGAACTGGGCATGGTCACCGCCCATCTTCGCCTCTCGGGAGAACAACTCTCGATTGAATTGAAGCCCGAAACACA
CGACGCCTACCGCCGGCTTTCCAGCGACAGCGAGGCAATCGTGAAGTCGCTGCGCGGGCTGGGCTTCGAGGTTGATAAGG
TCACGATCATGCAACCGTCGGTGGCCGTTCCGGCGACAACCCGGACGGATGCAACCGCCTCGCTCACCGCCGCGCCTGGT
CGCGACCAGTCCGCCTTTCAGCCCGGAAACTCCAGCGGCGGCAACAGTGGAGCCGGCGGCCAGCAACCGGGCCAGCAATC
CGCAAGGGGTAATCATGATGACGCGCAAGCCCACGGCCGCGCTGCTTCGCCATCTCGCGAGCGCGCTGGCGGCGATATGT
TTATCTAG

Upstream 100 bases:

>100_bases
ACTCTGCCGGTCCCGACACGACCGATCCGACCGACGCCGCCATGATGAAAACCCGTCGACAGCTCGACCTGATCGACCAG
ATGCTCGGAGCCGCCCCGAA

Downstream 100 bases:

>100_bases
CCTCGCGACCAGCGCCCTCGCCGCCACCAATCCCTGCGAGCCCGAGATCCTGCGCGCCGCCGACCGCTATGGCGTGCCCG
CCGGCATCCTCTATGCCGTC

Product: chemotaxis protein MotD

Products: NA

Alternate protein names: Motility protein D [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTPSLGPALPGFTAARTAEQPATPGKKDDAGFGKMVHGGAGQAEKQPTTERGARDPGWSKLAAGLAAQAGEDEPMPAGKA
RTAPTGAAAAKSMKDGKDIEADKDADTEAPATDAGATPLDDHLPLLMAFHDLRHFSTSAKSADAGETGQGPALDGQLLSK
AYRPTSGHDDLEPMPKPERVSLVDGPLTKLESARDASAGTGAPRRDNAIAAGPLPETTTAEVPGVEPKQAAPQLKSIADV
QSSLRSEPGKPLSAQARVDVVSERSFPAPPQAPMSQAALNVINAVAADVGPQQAFSTASATTHMAGSVAVPTHVLKIELH
PAELGMVTAHLRLSGEQLSIELKPETHDAYRRLSSDSEAIVKSLRGLGFEVDKVTIMQPSVAVPATTRTDATASLTAAPG
RDQSAFQPGNSSGGNSGAGGQQPGQQSARGNHDDAQAHGRAASPSRERAGGDMFI

Sequences:

>Translated_455_residues
MTPSLGPALPGFTAARTAEQPATPGKKDDAGFGKMVHGGAGQAEKQPTTERGARDPGWSKLAAGLAAQAGEDEPMPAGKA
RTAPTGAAAAKSMKDGKDIEADKDADTEAPATDAGATPLDDHLPLLMAFHDLRHFSTSAKSADAGETGQGPALDGQLLSK
AYRPTSGHDDLEPMPKPERVSLVDGPLTKLESARDASAGTGAPRRDNAIAAGPLPETTTAEVPGVEPKQAAPQLKSIADV
QSSLRSEPGKPLSAQARVDVVSERSFPAPPQAPMSQAALNVINAVAADVGPQQAFSTASATTHMAGSVAVPTHVLKIELH
PAELGMVTAHLRLSGEQLSIELKPETHDAYRRLSSDSEAIVKSLRGLGFEVDKVTIMQPSVAVPATTRTDATASLTAAPG
RDQSAFQPGNSSGGNSGAGGQQPGQQSARGNHDDAQAHGRAASPSRERAGGDMFI
>Mature_454_residues
TPSLGPALPGFTAARTAEQPATPGKKDDAGFGKMVHGGAGQAEKQPTTERGARDPGWSKLAAGLAAQAGEDEPMPAGKAR
TAPTGAAAAKSMKDGKDIEADKDADTEAPATDAGATPLDDHLPLLMAFHDLRHFSTSAKSADAGETGQGPALDGQLLSKA
YRPTSGHDDLEPMPKPERVSLVDGPLTKLESARDASAGTGAPRRDNAIAAGPLPETTTAEVPGVEPKQAAPQLKSIADVQ
SSLRSEPGKPLSAQARVDVVSERSFPAPPQAPMSQAALNVINAVAADVGPQQAFSTASATTHMAGSVAVPTHVLKIELHP
AELGMVTAHLRLSGEQLSIELKPETHDAYRRLSSDSEAIVKSLRGLGFEVDKVTIMQPSVAVPATTRTDATASLTAAPGR
DQSAFQPGNSSGGNSGAGGQQPGQQSARGNHDDAQAHGRAASPSRERAGGDMFI

Specific function: Required for the rotation of the flagellar motor. Has a positive effect as flagellar rotation increases when an excess of motd is present [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Associated with the inner surface of the motor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 46555; Mature: 46424

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSLGPALPGFTAARTAEQPATPGKKDDAGFGKMVHGGAGQAEKQPTTERGARDPGWSK
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCHHCCCCCCCHHH
LAAGLAAQAGEDEPMPAGKARTAPTGAAAAKSMKDGKDIEADKDADTEAPATDAGATPLD
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
DHLPLLMAFHDLRHFSTSAKSADAGETGQGPALDGQLLSKAYRPTSGHDDLEPMPKPERV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEE
SLVDGPLTKLESARDASAGTGAPRRDNAIAAGPLPETTTAEVPGVEPKQAAPQLKSIADV
EEECCCHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSSLRSEPGKPLSAQARVDVVSERSFPAPPQAPMSQAALNVINAVAADVGPQQAFSTASA
HHHHHCCCCCCCCCCHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TTHMAGSVAVPTHVLKIELHPAELGMVTAHLRLSGEQLSIELKPETHDAYRRLSSDSEAI
HHHHCCCEECCEEEEEEEECHHHHCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCHHHH
VKSLRGLGFEVDKVTIMQPSVAVPATTRTDATASLTAAPGRDQSAFQPGNSSGGNSGAGG
HHHHHHCCCEECEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
QQPGQQSARGNHDDAQAHGRAASPSRERAGGDMFI
CCCCHHHCCCCCCHHHHCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TPSLGPALPGFTAARTAEQPATPGKKDDAGFGKMVHGGAGQAEKQPTTERGARDPGWSK
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCHHCCCCCCCHHH
LAAGLAAQAGEDEPMPAGKARTAPTGAAAAKSMKDGKDIEADKDADTEAPATDAGATPLD
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
DHLPLLMAFHDLRHFSTSAKSADAGETGQGPALDGQLLSKAYRPTSGHDDLEPMPKPERV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEE
SLVDGPLTKLESARDASAGTGAPRRDNAIAAGPLPETTTAEVPGVEPKQAAPQLKSIADV
EEECCCHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QSSLRSEPGKPLSAQARVDVVSERSFPAPPQAPMSQAALNVINAVAADVGPQQAFSTASA
HHHHHCCCCCCCCCCHHEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TTHMAGSVAVPTHVLKIELHPAELGMVTAHLRLSGEQLSIELKPETHDAYRRLSSDSEAI
HHHHCCCEECCEEEEEEEECHHHHCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCHHHH
VKSLRGLGFEVDKVTIMQPSVAVPATTRTDATASLTAAPGRDQSAFQPGNSSGGNSGAGG
HHHHHHCCCEECEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
QQPGQQSARGNHDDAQAHGRAASPSRERAGGDMFI
CCCCHHHCCCCCCHHHHCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335288 [H]