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The map label for this gene is ahyR [H]

Identifier: 13472561

GI number: 13472561

Start: 2334693

End: 2335490

Strand: Direct

Name: ahyR [H]

Synonym: mlr2896

Alternate gene names: 13472561

Gene position: 2334693-2335490 (Clockwise)

Preceding gene: 13472559

Following gene: 13472562

Centisome position: 33.18

GC content: 63.78

Gene sequence:

>798_bases
GTGTCTCGTAAAAGTAACGCGTTTTCGGGTTCGGCGGCTGGCCTCCAGCATCCGGACGGCAGAAACGATTCCGGCCAAAA
GCAACAAATGAGCAGTCCCGCCGCGCTTCTTCAATCCGACACATTGGGCTCGCGCCTGACGTCGCGCGGCGATCTGACCA
GCTTCTTCATGGAGCTGACCGCCGAGATCGGCGCCGACAGTTACATGCTGGTCGCCATCGTCCACGACCAGGATCGCAAC
GACGCGCGCATCGTCTCCTCGAACTGGATCTTCGACGCCATCGAACTGATCGGCAAGCGGCTGATCGCCAGCCTTGCCCA
GGGGGCCCTCACGGTCGCGCCCGGTATCCGGCCTAGACCGCTGGTGGCCGCGCGGGCCCCCGATGCCGACGGGCTGGTCT
CCGGCGAAGAGGCCCGCCTTCTCGACGTGCTCGGCCACGCCGAGATCTATTCGTTGCGGCTGAATGTCGGCCGCCAGCGT
CTGTTCGCCCTGTTCTCGGCGGCGACATCAGGCCAGATCGATCAGCCGGCGCTGATGAAGGCGCAGTTGAAATGCTGCTA
CGCGCTCTCGCATATCCCGCAGCTGATCGCCGCCGCCGCCATGCAGGATCCGCTCTCCGATCGCGAGCGCGAATGCCTGT
TCTGGGTCTCGGAAGGCAAGACCACCGATGAGGTGGCGGTCATCCTTGGCGTCTCCTCCAACACCGTCAACAGCTACATC
ACCCACGCCATCCAGAAATTCGCGGCCAGCAACCGTGCGATGGCCATCGCCACGGCGATCAGGAGTGGCATCATTTGA

Upstream 100 bases:

>100_bases
CCAAAGTCTCACGTTCCGGAATCTTCCGGCGCCAGACGCGGATGTCTTCGCGTTCCCTCAATGGATTCCGTCTGGTTGGG
CGCGGCCCCGCGCCTCGTGT

Downstream 100 bases:

>100_bases
AACACGCCGACATCAAGGACACCGCGGAGGCCCTTTTCAACGAGCAGCGCAGCCCCTTCGGGGCTTTCTCGCTCAGTTCT
GAAACACACCACGCCGTCAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSRKSNAFSGSAAGLQHPDGRNDSGQKQQMSSPAALLQSDTLGSRLTSRGDLTSFFMELTAEIGADSYMLVAIVHDQDRN
DARIVSSNWIFDAIELIGKRLIASLAQGALTVAPGIRPRPLVAARAPDADGLVSGEEARLLDVLGHAEIYSLRLNVGRQR
LFALFSAATSGQIDQPALMKAQLKCCYALSHIPQLIAAAAMQDPLSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYI
THAIQKFAASNRAMAIATAIRSGII

Sequences:

>Translated_265_residues
MSRKSNAFSGSAAGLQHPDGRNDSGQKQQMSSPAALLQSDTLGSRLTSRGDLTSFFMELTAEIGADSYMLVAIVHDQDRN
DARIVSSNWIFDAIELIGKRLIASLAQGALTVAPGIRPRPLVAARAPDADGLVSGEEARLLDVLGHAEIYSLRLNVGRQR
LFALFSAATSGQIDQPALMKAQLKCCYALSHIPQLIAAAAMQDPLSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYI
THAIQKFAASNRAMAIATAIRSGII
>Mature_264_residues
SRKSNAFSGSAAGLQHPDGRNDSGQKQQMSSPAALLQSDTLGSRLTSRGDLTSFFMELTAEIGADSYMLVAIVHDQDRND
ARIVSSNWIFDAIELIGKRLIASLAQGALTVAPGIRPRPLVAARAPDADGLVSGEEARLLDVLGHAEIYSLRLNVGRQRL
FALFSAATSGQIDQPALMKAQLKCCYALSHIPQLIAAAAMQDPLSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYIT
HAIQKFAASNRAMAIATAIRSGII

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28355; Mature: 28223

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKSNAFSGSAAGLQHPDGRNDSGQKQQMSSPAALLQSDTLGSRLTSRGDLTSFFMELT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCHHHHHHHCCCHHHHHHHHHH
AEIGADSYMLVAIVHDQDRNDARIVSSNWIFDAIELIGKRLIASLAQGALTVAPGIRPRP
HHHCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
LVAARAPDADGLVSGEEARLLDVLGHAEIYSLRLNVGRQRLFALFSAATSGQIDQPALMK
EEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHH
AQLKCCYALSHIPQLIAAAAMQDPLSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHH
THAIQKFAASNRAMAIATAIRSGII
HHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKSNAFSGSAAGLQHPDGRNDSGQKQQMSSPAALLQSDTLGSRLTSRGDLTSFFMELT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCHHHHHHHCCCHHHHHHHHHH
AEIGADSYMLVAIVHDQDRNDARIVSSNWIFDAIELIGKRLIASLAQGALTVAPGIRPRP
HHHCCCCEEEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
LVAARAPDADGLVSGEEARLLDVLGHAEIYSLRLNVGRQRLFALFSAATSGQIDQPALMK
EEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHH
AQLKCCYALSHIPQLIAAAAMQDPLSDRERECLFWVSEGKTTDEVAVILGVSSNTVNSYI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHH
THAIQKFAASNRAMAIATAIRSGII
HHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]