| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472498
Identifier: 13472498
GI number: 13472498
Start: 2257637
End: 2258080
Strand: Direct
Name: 13472498
Synonym: mlr2817
Alternate gene names: NA
Gene position: 2257637-2258080 (Clockwise)
Preceding gene: 13472496
Following gene: 13472500
Centisome position: 32.09
GC content: 58.11
Gene sequence:
>444_bases ATGCCTGGGCCTTTCCAGGTGGTTTGGACGATATGTGCGGGTGTGCGTTTCCGGGAGTACCGAATCATGAAGTCACGTGA AAACCTCGTTCGGCTGAAACAGTTTCAGGTGAATGAGAAGCGGCGGCAGCTGCTGCAGCTCGACATGATGATCGCCGAGT TCGAACGCATGGCCGTCGAACTGGAGCTTCAGATCACCGCCGAGGAAAAGAAAGCCGGCATCACCGACATCAATCATTTC GCCTATCCGACCTTCGCCAAGGCGGCGCGCTTGCGCCGCGACAACCTCAGAAATTCGCAAAGCGACCTCGCCCAACAGCG AAGCGCTGCCGAATCATTACTCGGTGAAGCTGAAGCGGAGCTTTCCAAGGCCGAAATGCTGGAGTCGCGCGACACCAAGG TCCGCGAAGCCGAAACCGGTGGCCGTAGCGCCATGATCGGCTGA
Upstream 100 bases:
>100_bases GCCGTATGATTAACAATGCCCGTAAACGAATGGTTACCGCCGGCAAAAAACTTTAGGGTTTTGTTTCCCATAGTTCGGGA GATGCCGGTGGACACGGGCA
Downstream 100 bases:
>100_bases ACCGGTCGAGATCGGCACCATCGGCGGGCGGGTAACCCATCGGGCCATCGGCCCGAACCGACCTCTTGCCGCGAGATCCC CAATCTAGGCGGCCCAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Export FliJ; Flagelar FliJ Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPGPFQVVWTICAGVRFREYRIMKSRENLVRLKQFQVNEKRRQLLQLDMMIAEFERMAVELELQITAEEKKAGITDINHF AYPTFAKAARLRRDNLRNSQSDLAQQRSAAESLLGEAEAELSKAEMLESRDTKVREAETGGRSAMIG
Sequences:
>Translated_147_residues MPGPFQVVWTICAGVRFREYRIMKSRENLVRLKQFQVNEKRRQLLQLDMMIAEFERMAVELELQITAEEKKAGITDINHF AYPTFAKAARLRRDNLRNSQSDLAQQRSAAESLLGEAEAELSKAEMLESRDTKVREAETGGRSAMIG >Mature_146_residues PGPFQVVWTICAGVRFREYRIMKSRENLVRLKQFQVNEKRRQLLQLDMMIAEFERMAVELELQITAEEKKAGITDINHFA YPTFAKAARLRRDNLRNSQSDLAQQRSAAESLLGEAEAELSKAEMLESRDTKVREAETGGRSAMIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16864; Mature: 16732
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPFQVVWTICAGVRFREYRIMKSRENLVRLKQFQVNEKRRQLLQLDMMIAEFERMAVE CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEE LELQITAEEKKAGITDINHFAYPTFAKAARLRRDNLRNSQSDLAQQRSAAESLLGEAEAE EEEEEECCHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSKAEMLESRDTKVREAETGGRSAMIG HHHHHHHHHCCCHHHHHCCCCCCCCCC >Mature Secondary Structure PGPFQVVWTICAGVRFREYRIMKSRENLVRLKQFQVNEKRRQLLQLDMMIAEFERMAVE CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEE LELQITAEEKKAGITDINHFAYPTFAKAARLRRDNLRNSQSDLAQQRSAAESLLGEAEAE EEEEEECCHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSKAEMLESRDTKVREAETGGRSAMIG HHHHHHHHHCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA