Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472471

Identifier: 13472471

GI number: 13472471

Start: 2232198

End: 2232635

Strand: Direct

Name: 13472471

Synonym: mlr2777

Alternate gene names: NA

Gene position: 2232198-2232635 (Clockwise)

Preceding gene: 13472469

Following gene: 13472472

Centisome position: 31.73

GC content: 64.38

Gene sequence:

>438_bases
ATGCGCCGACGCGACATGTTCCGCGCGGTTCTTGCCGGAACCGGAACGTTTCTCGGCCTGCGGGCGGTGCAGGCCGCGGC
CACGGAAACCCCACGGCTGAAGGTTGCCTATCATCTGAGCGATGTGGACAAGGTCAACTTCGTGCTCGGCAATATCAAGA
ACCACTATGAGGGCACCGGCGGCAATGTCGACATCGCGCTGGTCGTGCATGGCCCGGCCCTGGCGAGCTTCAAGTCGAAA
GGCATATCTGCCGCGGTTTCCGGCCGCTTCGCCGGCCTGGTGCAGCAGGGCCTCGAGCCGCAAGCCTGCGGCAACACCAT
GCGGGGTATGGATATTTCGCTCGCCGACCTGCTCGACGGCTTCCATGCCGCCGACAAGGGCGGCGTCGTCAAGCTCGCGG
AACTGCAAAGCCAGGGCTATGCCTATCTGCGCCCCTGA

Upstream 100 bases:

>100_bases
GTCATGTGGCCTCTCCTCGCATCGGCAGGACGTAGCGTCAATTTATGCTAGTATTGCCGCCACAGCCACGCAAATCGCGG
TAAGATCTGAGGAGGATGCC

Downstream 100 bases:

>100_bases
GGCTTGAACACCGGGGTGGCAAAGGCCTACGAAGGGCGGCGGACATGCCGGAGGAACAACAGTGCCAGCCACCAATACGC
TCAGCATCCCCGATCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRRRDMFRAVLAGTGTFLGLRAVQAAATETPRLKVAYHLSDVDKVNFVLGNIKNHYEGTGGNVDIALVVHGPALASFKSK
GISAAVSGRFAGLVQQGLEPQACGNTMRGMDISLADLLDGFHAADKGGVVKLAELQSQGYAYLRP

Sequences:

>Translated_145_residues
MRRRDMFRAVLAGTGTFLGLRAVQAAATETPRLKVAYHLSDVDKVNFVLGNIKNHYEGTGGNVDIALVVHGPALASFKSK
GISAAVSGRFAGLVQQGLEPQACGNTMRGMDISLADLLDGFHAADKGGVVKLAELQSQGYAYLRP
>Mature_145_residues
MRRRDMFRAVLAGTGTFLGLRAVQAAATETPRLKVAYHLSDVDKVNFVLGNIKNHYEGTGGNVDIALVVHGPALASFKSK
GISAAVSGRFAGLVQQGLEPQACGNTMRGMDISLADLLDGFHAADKGGVVKLAELQSQGYAYLRP

Specific function: Unknown

COG id: COG1416

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15344; Mature: 15344

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRDMFRAVLAGTGTFLGLRAVQAAATETPRLKVAYHLSDVDKVNFVLGNIKNHYEGTG
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCC
GNVDIALVVHGPALASFKSKGISAAVSGRFAGLVQQGLEPQACGNTMRGMDISLADLLDG
CCEEEEEEEECCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHH
FHAADKGGVVKLAELQSQGYAYLRP
HCCCCCCCEEEEEEECCCCEEEECC
>Mature Secondary Structure
MRRRDMFRAVLAGTGTFLGLRAVQAAATETPRLKVAYHLSDVDKVNFVLGNIKNHYEGTG
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCC
GNVDIALVVHGPALASFKSKGISAAVSGRFAGLVQQGLEPQACGNTMRGMDISLADLLDG
CCEEEEEEEECCHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHH
FHAADKGGVVKLAELQSQGYAYLRP
HCCCCCCCEEEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA