| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yxxF [H]
Identifier: 13472450
GI number: 13472450
Start: 2207251
End: 2208147
Strand: Reverse
Name: yxxF [H]
Synonym: mll2749
Alternate gene names: 13472450
Gene position: 2208147-2207251 (Counterclockwise)
Preceding gene: 13472460
Following gene: 13472448
Centisome position: 31.38
GC content: 66.0
Gene sequence:
>897_bases ATGAAGGACCTGCCAACTTCCCGTTTTCCGGCCGCGAGCCTGGCCTTGGCGATGATGATTGCCGGCACGGTTGGCGCCTT TGTCACGGAAGCCGGGCTTCATCCCGTGACGATCGTGTTCTGGCGCTGCGTGTTCGGCGCCATGTTCCTCGGCGCATGGT GCCTGCTCCGGGGCTACCTGCCGGACAGGACGCTGTCGCCGTCCCGCCTCGCGCTGGCTGCACTTGCCGGCGCTTGCATG GTGCTGAGCTGGACGGCCTTCTTCGCCGGCTTCGCCATGACGTCGATCGCCACGACGACGATCGTCTATCACGTGCAGCC GTTCTTCGTCGTCATCATCGGGGTGGTCTTCCTCAAGGAGCGCATCTCGCTCGACCAGATGCTTTGGATGCTTGGCGCGT TCCTTGGCGTCGTGCTGGCCAGCGGCCTGGTGGTTTCGCATGCGCAGGCCAGTGCGGCATGGGCGCTGGGCATCGCGCTG ACGCTGGTCGCCGCGCTGCTCTACGCGGTGGCGACGATCCTCGCCAAGGGCCTGGGCCAGCAGCGCGCCGAGGTCACCGT GCTTTGCCAGACGATCATCGGGATCGTCATGCTCGCGCCCTTCGCCGGCATCGGCCAGCATGTTCCGGCGCATTCATGGG GCTGGCTGGTCAGCATCGGCGTGCTGCACACCGGCATTGCCTATGTGCTAATGAACTCGGCCTTTCCGCGCCTGACGACG CCGGTGATCGGCATCATCACCTTCATCTATCCGGTCGTTGCCATCATCATCGACTGGGCAGTCTATGGGCATCCGCTCGG GCCGGCGCAGGCAGCCGGCATGGCGCTGATCGCCTTGGCGACGCTCGGTGTCCGGCTGGGCTGGCGGTTTCCGCTGAGGC GTGTCTCGGCGGCCTGA
Upstream 100 bases:
>100_bases ATGGTGCTATCAGCATATCGAATAGCTTGCTCCAAATCTATTCGCTTGTTTGAAAGCTATACTGGTGGCCAGATGGGTTC GCCCGTCTGGGGGATTTTCG
Downstream 100 bases:
>100_bases GGCGGATCGCCGCTCAAGATGGTCAGGATTTCATGAAGCCGATGAAATCGTCGGGCGCGGCGCGGCCCATTTCTTCTTCC CAGTGACGGCGGCAGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKDLPTSRFPAASLALAMMIAGTVGAFVTEAGLHPVTIVFWRCVFGAMFLGAWCLLRGYLPDRTLSPSRLALAALAGACM VLSWTAFFAGFAMTSIATTTIVYHVQPFFVVIIGVVFLKERISLDQMLWMLGAFLGVVLASGLVVSHAQASAAWALGIAL TLVAALLYAVATILAKGLGQQRAEVTVLCQTIIGIVMLAPFAGIGQHVPAHSWGWLVSIGVLHTGIAYVLMNSAFPRLTT PVIGIITFIYPVVAIIIDWAVYGHPLGPAQAAGMALIALATLGVRLGWRFPLRRVSAA
Sequences:
>Translated_298_residues MKDLPTSRFPAASLALAMMIAGTVGAFVTEAGLHPVTIVFWRCVFGAMFLGAWCLLRGYLPDRTLSPSRLALAALAGACM VLSWTAFFAGFAMTSIATTTIVYHVQPFFVVIIGVVFLKERISLDQMLWMLGAFLGVVLASGLVVSHAQASAAWALGIAL TLVAALLYAVATILAKGLGQQRAEVTVLCQTIIGIVMLAPFAGIGQHVPAHSWGWLVSIGVLHTGIAYVLMNSAFPRLTT PVIGIITFIYPVVAIIIDWAVYGHPLGPAQAAGMALIALATLGVRLGWRFPLRRVSAA >Mature_298_residues MKDLPTSRFPAASLALAMMIAGTVGAFVTEAGLHPVTIVFWRCVFGAMFLGAWCLLRGYLPDRTLSPSRLALAALAGACM VLSWTAFFAGFAMTSIATTTIVYHVQPFFVVIIGVVFLKERISLDQMLWMLGAFLGVVLASGLVVSHAQASAAWALGIAL TLVAALLYAVATILAKGLGQQRAEVTVLCQTIIGIVMLAPFAGIGQHVPAHSWGWLVSIGVLHTGIAYVLMNSAFPRLTT PVIGIITFIYPVVAIIIDWAVYGHPLGPAQAAGMALIALATLGVRLGWRFPLRRVSAA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31559; Mature: 31559
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLPTSRFPAASLALAMMIAGTVGAFVTEAGLHPVTIVFWRCVFGAMFLGAWCLLRGYL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PDRTLSPSRLALAALAGACMVLSWTAFFAGFAMTSIATTTIVYHVQPFFVVIIGVVFLKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISLDQMLWMLGAFLGVVLASGLVVSHAQASAAWALGIALTLVAALLYAVATILAKGLGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QRAEVTVLCQTIIGIVMLAPFAGIGQHVPAHSWGWLVSIGVLHTGIAYVLMNSAFPRLTT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH PVIGIITFIYPVVAIIIDWAVYGHPLGPAQAAGMALIALATLGVRLGWRFPLRRVSAA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MKDLPTSRFPAASLALAMMIAGTVGAFVTEAGLHPVTIVFWRCVFGAMFLGAWCLLRGYL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC PDRTLSPSRLALAALAGACMVLSWTAFFAGFAMTSIATTTIVYHVQPFFVVIIGVVFLKE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RISLDQMLWMLGAFLGVVLASGLVVSHAQASAAWALGIALTLVAALLYAVATILAKGLGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QRAEVTVLCQTIIGIVMLAPFAGIGQHVPAHSWGWLVSIGVLHTGIAYVLMNSAFPRLTT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH PVIGIITFIYPVVAIIIDWAVYGHPLGPAQAAGMALIALATLGVRLGWRFPLRRVSAA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8316082 [H]