Click here to switch to the map view.

The map label for this gene is 13472448

Identifier: 13472448

GI number: 13472448

Start: 2205424

End: 2206350

Strand: Reverse

Name: 13472448

Synonym: mll2746

Alternate gene names: NA

Gene position: 2206350-2205424 (Counterclockwise)

Preceding gene: 13472450

Following gene: 13472447

Centisome position: 31.36

GC content: 62.68

Gene sequence:

>927_bases
ATGAATTCCTTCGTCGCCGGCCTCGGCCTGGCGGCTCTGTTGTCCACGAGCGCCGCCTTCGCCGGTGACGCCGAAAGCTG
CAAGACCGTGCGGCTTTCCGATGTCGGCTGGACCGACATCCAGGCCACCACCGGCCTCGCCTCGGTGCTGCTCACCGCGC
TCGGCTACGAGCCGAAGGTGATCCAGCTGTCGGTGCCGGTGACCATGGCTTCGCTGAAGAACAAGGACCTTGACGTCTTT
CTCGGCAACTGGATGCCGTCGATGACCAACGACATCAAGGATTACACCGCCGATGGCTCGGTCGAGACCATCAGCACGAA
CCTGACCGGCGCCGGCTACGGCATCGTCGTGCCGACCTATGTCGCCGACGCCGGCGTCAAGTCGCTGACCGACCTTGGCA
AGTTCAAGGACAAGTTCAACGGCAAGATCTACGGCATCGAAGCCGGCAATGACGGCAACCGCATCATCCTCGATATGATC
AAGAACCCGAAGGACAATCTCGAGGGCTTCGAGCTGGTCGAATCCTCGGAGGCCGGCATGCTGACGCAGGCCGAGCAGTC
GATGAAGAACAATGAGTGGATCGCCTTCCTCGGCTGGACGCCGCATCCGGTGATGGGCGCCATGAAGATCACCTATCTCG
ACGGCATGGGCGACAGCGGCTTCGGCGCGGCCACCGTGTTCACCAACGTGCGCAAGGGCTACACCACCGAATGCCCGAAT
GCCGGCAAGTTCATCGCCAACCTGAAGTTCAATCTGGACATGGAAGGCCAGATGATGGACGCGATCCTCAAGGGCGCTGA
CGCTCAGACGGTCGCCACCGACTGGCTGAAGAAGAATCCGGACGCGGTCAAGCCATGGATCGCCGGCGTGACCACCTTCG
ACGGCGGCGACGCCGCGGCGGCCGTCAAGACCGCGCTCGGAAGCTGA

Upstream 100 bases:

>100_bases
ACTACACCAGAATGGTGTTTGGCTGACGAAACAAGGCGGGCAGAGAAACCGTACCTACGCTTCGCCAAAGAATCACAATG
GGAGACTGTCTATGTCGCGT

Downstream 100 bases:

>100_bases
GCCGACTTCGCATCCGGCATGACCGGATGAAGATGGGCAGCCGTTTGACAAAGGGCTGCCCTTTTTCACATCCTGTGACA
AGATGACGTTGCGACAGCGC

Product: ABC transporter binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNSFVAGLGLAALLSTSAAFAGDAESCKTVRLSDVGWTDIQATTGLASVLLTALGYEPKVIQLSVPVTMASLKNKDLDVF
LGNWMPSMTNDIKDYTADGSVETISTNLTGAGYGIVVPTYVADAGVKSLTDLGKFKDKFNGKIYGIEAGNDGNRIILDMI
KNPKDNLEGFELVESSEAGMLTQAEQSMKNNEWIAFLGWTPHPVMGAMKITYLDGMGDSGFGAATVFTNVRKGYTTECPN
AGKFIANLKFNLDMEGQMMDAILKGADAQTVATDWLKKNPDAVKPWIAGVTTFDGGDAAAAVKTALGS

Sequences:

>Translated_308_residues
MNSFVAGLGLAALLSTSAAFAGDAESCKTVRLSDVGWTDIQATTGLASVLLTALGYEPKVIQLSVPVTMASLKNKDLDVF
LGNWMPSMTNDIKDYTADGSVETISTNLTGAGYGIVVPTYVADAGVKSLTDLGKFKDKFNGKIYGIEAGNDGNRIILDMI
KNPKDNLEGFELVESSEAGMLTQAEQSMKNNEWIAFLGWTPHPVMGAMKITYLDGMGDSGFGAATVFTNVRKGYTTECPN
AGKFIANLKFNLDMEGQMMDAILKGADAQTVATDWLKKNPDAVKPWIAGVTTFDGGDAAAAVKTALGS
>Mature_308_residues
MNSFVAGLGLAALLSTSAAFAGDAESCKTVRLSDVGWTDIQATTGLASVLLTALGYEPKVIQLSVPVTMASLKNKDLDVF
LGNWMPSMTNDIKDYTADGSVETISTNLTGAGYGIVVPTYVADAGVKSLTDLGKFKDKFNGKIYGIEAGNDGNRIILDMI
KNPKDNLEGFELVESSEAGMLTQAEQSMKNNEWIAFLGWTPHPVMGAMKITYLDGMGDSGFGAATVFTNVRKGYTTECPN
AGKFIANLKFNLDMEGQMMDAILKGADAQTVATDWLKKNPDAVKPWIAGVTTFDGGDAAAAVKTALGS

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32571; Mature: 32571

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFVAGLGLAALLSTSAAFAGDAESCKTVRLSDVGWTDIQATTGLASVLLTALGYEPKV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEE
IQLSVPVTMASLKNKDLDVFLGNWMPSMTNDIKDYTADGSVETISTNLTGAGYGIVVPTY
EEEECCEEEEHHCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEHH
VADAGVKSLTDLGKFKDKFNGKIYGIEAGNDGNRIILDMIKNPKDNLEGFELVESSEAGM
HHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCHHEEECCCCCCC
LTQAEQSMKNNEWIAFLGWTPHPVMGAMKITYLDGMGDSGFGAATVFTNVRKGYTTECPN
HHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
AGKFIANLKFNLDMEGQMMDAILKGADAQTVATDWLKKNPDAVKPWIAGVTTFDGGDAAA
CCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCEEEEECCCCHHH
AVKTALGS
HHHHHHCC
>Mature Secondary Structure
MNSFVAGLGLAALLSTSAAFAGDAESCKTVRLSDVGWTDIQATTGLASVLLTALGYEPKV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEE
IQLSVPVTMASLKNKDLDVFLGNWMPSMTNDIKDYTADGSVETISTNLTGAGYGIVVPTY
EEEECCEEEEHHCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEHH
VADAGVKSLTDLGKFKDKFNGKIYGIEAGNDGNRIILDMIKNPKDNLEGFELVESSEAGM
HHHCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCCCHHEEECCCCCCC
LTQAEQSMKNNEWIAFLGWTPHPVMGAMKITYLDGMGDSGFGAATVFTNVRKGYTTECPN
HHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
AGKFIANLKFNLDMEGQMMDAILKGADAQTVATDWLKKNPDAVKPWIAGVTTFDGGDAAA
CCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCEEEEECCCCHHH
AVKTALGS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]