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The map label for this gene is ohrR [H]

Identifier: 13472404

GI number: 13472404

Start: 2164214

End: 2164642

Strand: Direct

Name: ohrR [H]

Synonym: mlr2690

Alternate gene names: 13472404

Gene position: 2164214-2164642 (Clockwise)

Preceding gene: 13472402

Following gene: 13472405

Centisome position: 30.76

GC content: 62.0

Gene sequence:

>429_bases
GTGCCTCTCCCGTTGGACAATCAGCTCTGCTTCACGCTCTATGCCACCAGCATGGCGATCAACCGCACCTACAAGCCGAT
GCTGGACGAAATGGGGATCACCTATCCGCAATATCTCGTGCTCAACGCGCTGGGTGAGGCCGACGGCATGTCGGTCGGCT
CGATTGCGCATAGGCTCGCTTTGGAATCGAGCACCGTCACGCCACTGGTGAAGCGAATGGAACAGGCCGGGTTGGTCACC
CGCCAGCGCAGCCAGGTCGATGAGCGCCAGGTTCAGGTCGACCTGACATCAACCGGGCGCGCGCTGCTCGTCCAGTGCAA
CTGCCTCAACGAGACCTTGATCAAGCGCTCGGGCATGACGCTGGCTGAGCTCGATGCGCTGAACCGGCAAGTCCAGGCGC
TGCGCGATGCGTTGAACGGCCATCGGTAG

Upstream 100 bases:

>100_bases
CTTGAGCCCCTGTCTACAAAGATATGTATCGCGATATCATTTTTCGTGGTATCGAATTCCTTGCGCCGACAAACAAAGGT
CGGCAAACAAGGAACGCGTC

Downstream 100 bases:

>100_bases
CCACCGGCTGAAGCTCGAGTGCCTTGGGGCGGCTTGAACTGCGCTCGCGCGGAATCGAAATGCTTCCTTCGTTCGCCCTC
TCGTGCTCAGGCTGGCACGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPLPLDNQLCFTLYATSMAINRTYKPMLDEMGITYPQYLVLNALGEADGMSVGSIAHRLALESSTVTPLVKRMEQAGLVT
RQRSQVDERQVQVDLTSTGRALLVQCNCLNETLIKRSGMTLAELDALNRQVQALRDALNGHR

Sequences:

>Translated_142_residues
MPLPLDNQLCFTLYATSMAINRTYKPMLDEMGITYPQYLVLNALGEADGMSVGSIAHRLALESSTVTPLVKRMEQAGLVT
RQRSQVDERQVQVDLTSTGRALLVQCNCLNETLIKRSGMTLAELDALNRQVQALRDALNGHR
>Mature_141_residues
PLPLDNQLCFTLYATSMAINRTYKPMLDEMGITYPQYLVLNALGEADGMSVGSIAHRLALESSTVTPLVKRMEQAGLVTR
QRSQVDERQVQVDLTSTGRALLVQCNCLNETLIKRSGMTLAELDALNRQVQALRDALNGHR

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15749; Mature: 15618

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLDNQLCFTLYATSMAINRTYKPMLDEMGITYPQYLVLNALGEADGMSVGSIAHRLA
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LESSTVTPLVKRMEQAGLVTRQRSQVDERQVQVDLTSTGRALLVQCNCLNETLIKRSGMT
HCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCCEEEEEECHHHHHHHHHCCCC
LAELDALNRQVQALRDALNGHR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPLDNQLCFTLYATSMAINRTYKPMLDEMGITYPQYLVLNALGEADGMSVGSIAHRLA
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LESSTVTPLVKRMEQAGLVTRQRSQVDERQVQVDLTSTGRALLVQCNCLNETLIKRSGMT
HCCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEECCCCCEEEEEECHHHHHHHHHCCCC
LAELDALNRQVQALRDALNGHR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]