| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472394
Identifier: 13472394
GI number: 13472394
Start: 2154293
End: 2154640
Strand: Direct
Name: 13472394
Synonym: mlr2676
Alternate gene names: NA
Gene position: 2154293-2154640 (Clockwise)
Preceding gene: 13472390
Following gene: 13472395
Centisome position: 30.62
GC content: 62.64
Gene sequence:
>348_bases ATGCCATGCCTGCGCCAAGCTTTCAAATGGCCCCAAGCTGTACTTGAGGACGTCAAATCGCCTACTGTGTGGTCATCACG CAGTGCTGCAGCACGCTCCAGTCAGGATCACCCAATGGCAACGCCCCCGCGCCGACCGACAAATCCGTTCGCGGCCGCCG AAGCGGCCTTCAAGCCGGTCAAGAAACCGGCAGCGCCAGTTCGCGAACCCTCGACCGCCCCGAATGTCCGCGAACTTGTC TCGATCCGGATCGACCGGGCCGTGCTCGATCATTTCCAGGAAGACGGTCCCGGCTGGCAGGACAGGATCAACGACGCATT GCGGCAGTGGCTGGCCGCCAAGGGTTGA
Upstream 100 bases:
>100_bases GCAAATCCTCGCTTTGCTCGAAATGACGTAGTGGCGCGGAACGCCGAATGCAAGAACGTTCAGGGCTGGTGCGCCCTCTG CGTTGCTATGGCGCATGGCG
Downstream 100 bases:
>100_bases ACTCACCACCCACGGCGCGACGGCCCGCAAGAGTGATCCGTCGCGACGCTTGACGGCGGCCGGCTTGCCTTGACCCTGCC AAAACCCTGCCGCATGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPCLRQAFKWPQAVLEDVKSPTVWSSRSAAARSSQDHPMATPPRRPTNPFAAAEAAFKPVKKPAAPVREPSTAPNVRELV SIRIDRAVLDHFQEDGPGWQDRINDALRQWLAAKG
Sequences:
>Translated_115_residues MPCLRQAFKWPQAVLEDVKSPTVWSSRSAAARSSQDHPMATPPRRPTNPFAAAEAAFKPVKKPAAPVREPSTAPNVRELV SIRIDRAVLDHFQEDGPGWQDRINDALRQWLAAKG >Mature_114_residues PCLRQAFKWPQAVLEDVKSPTVWSSRSAAARSSQDHPMATPPRRPTNPFAAAEAAFKPVKKPAAPVREPSTAPNVRELVS IRIDRAVLDHFQEDGPGWQDRINDALRQWLAAKG
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12764; Mature: 12632
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCLRQAFKWPQAVLEDVKSPTVWSSRSAAARSSQDHPMATPPRRPTNPFAAAEAAFKPV CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH KKPAAPVREPSTAPNVRELVSIRIDRAVLDHFQEDGPGWQDRINDALRQWLAAKG HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PCLRQAFKWPQAVLEDVKSPTVWSSRSAAARSSQDHPMATPPRRPTNPFAAAEAAFKPV CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH KKPAAPVREPSTAPNVRELVSIRIDRAVLDHFQEDGPGWQDRINDALRQWLAAKG HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA