| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472390
Identifier: 13472390
GI number: 13472390
Start: 2151692
End: 2152546
Strand: Direct
Name: 13472390
Synonym: mlr2671
Alternate gene names: NA
Gene position: 2151692-2152546 (Clockwise)
Preceding gene: 13472389
Following gene: 13472394
Centisome position: 30.58
GC content: 60.23
Gene sequence:
>855_bases ATGGGCTATTGTCGCGCGAATGCCTGGCCGCTCTTCGTGGCCGCCTGGTTTCCCTGCTTTCTGACGACGCTCTGTCTGAC GGTGCTTGCTCTCGTTCTTTTTGCCGATCCGGAGCAGGCGCCCACCTGGCTTCTATCGCGAGGCTTTGACCCCAGGACTT GGCTTTCCGCAATTGTTGCCGCACCGTTCTCGGCGATGGTTTTTGCGTTCGTTCTCGACCGTATGGCAAACGCGCCAGAG CACGGCCGCGTCGTTGTTCGCCGCGGCATTGAAAGCGTCAAACACGTCGCCATCCCAGGCATGCGCTTTGAACTCGGCCA GCGGATCTTTCTGGCTGCGTTGCTTCTCGCGGCCAGCCAGCTTCTTTGCGGCTTTGCGGTCGCCGGTGAGCACAGACTGC TTGTTGCCGGCCTGCTGGCCATACGTGACCTACCGCTCAGCCCTGAGGACGTCGCGCCTTGGGCCGCGGCGTCGGGAGTC TTCAACCTCTTCGCGGGTGGTTTCGTCCTTGCCTGGACATATCTCTTTGTCGGCGATTTTCTCTGGACGGGATCGTTTGA TCCAATCGGGTGCTGGCGTGCGCTGAAGGGCAATCTTCTGCGGTTCGTAGCCATTATGTTCATCGTTCTCGCAATCGTTG CCATACTCAAATATGGGCTGATTCTGGCTGCCGGCTTGATCCTAATCCCCGCGGATGCCGAGCCCTCCTTCTTGACCCTT ATGCTGATGCATTTCGCACTCGCCTGGCCGTTCAACGTCCTGCATCTCGTGCTTTCGGCCGCCACGGCCGGAACCATTCT CGGCGCGTTTCGGCCCCCAGCCATCGCTTCAATCCGGCCGACTGCCGCGCAATGA
Upstream 100 bases:
>100_bases AGTTCCTGCGGGATTGACGCCGATTTCAACGCTGGACGAAGCGCCTGCCGTATCGCCGAAGCGTCGCGTCTTGCGCATCA GCAAGACCGTTGCGAGGGTA
Downstream 100 bases:
>100_bases TTGTGCCTGCCGGAGTTGCTCGGGGCGCGGCACTCGGCAAGGTTCTTTGAACTGACCAGGCCAAGTTGCATCTGAAAAGA TCAAGCGAAGAGGTGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGYCRANAWPLFVAAWFPCFLTTLCLTVLALVLFADPEQAPTWLLSRGFDPRTWLSAIVAAPFSAMVFAFVLDRMANAPE HGRVVVRRGIESVKHVAIPGMRFELGQRIFLAALLLAASQLLCGFAVAGEHRLLVAGLLAIRDLPLSPEDVAPWAAASGV FNLFAGGFVLAWTYLFVGDFLWTGSFDPIGCWRALKGNLLRFVAIMFIVLAIVAILKYGLILAAGLILIPADAEPSFLTL MLMHFALAWPFNVLHLVLSAATAGTILGAFRPPAIASIRPTAAQ
Sequences:
>Translated_284_residues MGYCRANAWPLFVAAWFPCFLTTLCLTVLALVLFADPEQAPTWLLSRGFDPRTWLSAIVAAPFSAMVFAFVLDRMANAPE HGRVVVRRGIESVKHVAIPGMRFELGQRIFLAALLLAASQLLCGFAVAGEHRLLVAGLLAIRDLPLSPEDVAPWAAASGV FNLFAGGFVLAWTYLFVGDFLWTGSFDPIGCWRALKGNLLRFVAIMFIVLAIVAILKYGLILAAGLILIPADAEPSFLTL MLMHFALAWPFNVLHLVLSAATAGTILGAFRPPAIASIRPTAAQ >Mature_283_residues GYCRANAWPLFVAAWFPCFLTTLCLTVLALVLFADPEQAPTWLLSRGFDPRTWLSAIVAAPFSAMVFAFVLDRMANAPEH GRVVVRRGIESVKHVAIPGMRFELGQRIFLAALLLAASQLLCGFAVAGEHRLLVAGLLAIRDLPLSPEDVAPWAAASGVF NLFAGGFVLAWTYLFVGDFLWTGSFDPIGCWRALKGNLLRFVAIMFIVLAIVAILKYGLILAAGLILIPADAEPSFLTLM LMHFALAWPFNVLHLVLSAATAGTILGAFRPPAIASIRPTAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30707; Mature: 30576
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYCRANAWPLFVAAWFPCFLTTLCLTVLALVLFADPEQAPTWLLSRGFDPRTWLSAIVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH APFSAMVFAFVLDRMANAPEHGRVVVRRGIESVKHVAIPGMRFELGQRIFLAALLLAASQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLCGFAVAGEHRLLVAGLLAIRDLPLSPEDVAPWAAASGVFNLFAGGFVLAWTYLFVGDF HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTGSFDPIGCWRALKGNLLRFVAIMFIVLAIVAILKYGLILAAGLILIPADAEPSFLTL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH MLMHFALAWPFNVLHLVLSAATAGTILGAFRPPAIASIRPTAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GYCRANAWPLFVAAWFPCFLTTLCLTVLALVLFADPEQAPTWLLSRGFDPRTWLSAIVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH APFSAMVFAFVLDRMANAPEHGRVVVRRGIESVKHVAIPGMRFELGQRIFLAALLLAASQ HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLCGFAVAGEHRLLVAGLLAIRDLPLSPEDVAPWAAASGVFNLFAGGFVLAWTYLFVGDF HHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTGSFDPIGCWRALKGNLLRFVAIMFIVLAIVAILKYGLILAAGLILIPADAEPSFLTL HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH MLMHFALAWPFNVLHLVLSAATAGTILGAFRPPAIASIRPTAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA