| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472273
Identifier: 13472273
GI number: 13472273
Start: 2038231
End: 2038701
Strand: Reverse
Name: 13472273
Synonym: mll2512
Alternate gene names: NA
Gene position: 2038701-2038231 (Counterclockwise)
Preceding gene: 13472277
Following gene: 13472271
Centisome position: 28.97
GC content: 64.76
Gene sequence:
>471_bases ATGACCCGCGACCAGATGTTCGCCCACCTGCGCGCCGCCAATGACGTCGCGCGCGAGGCTGCCGCGCATGGGCACCATCC TTTCGGCTGTGTACTCGTCGGCCCCGATGATCACATCCTGATGCGGCAAGGCAACATCAACACCGTGCGCCACGCCGAAA CCGAACTCGGCCGGCGTGCCGCGGACGCCTATCCGCCGGAATTCCTGTGGTCCTGCACGCTGGTCTCGACCGGCGAGCCC TGTGCGATGTGCACAGGAACGCTCTATTGGGCAAATATCGGCCGGCTGGTCTACGGCTTCGAGGAGACCAAGCTTCTCAC GCTGACTGGCGACCATGCCGAGAATCCGACGATGAACCTCTCCTCGCGCACGGTCCTCGACTCCGGGCAGAAGCCGGTCG AGGTCCACGGCCCCATCCCCGAGATGGAGGAGGAGCTTCTCGCCCCTCATATCGGTTTCTGGCAGCGCTAG
Upstream 100 bases:
>100_bases CCCATGGCTATCGCGAGGCAGCATTCCATCTGCTACCATCCATGCCGTCCCGGAGTTGATGTGGGATATCCGCTGAGACA GGCCCGGAAGGCACCAAGCG
Downstream 100 bases:
>100_bases CGGCGACAGAAATTTAGCCCAGAACCTGCAGACTTAGGCCGGCATCTCAATATCGTGGCCGCCGACCGCCGGCAGAGCGG GGTCATCGACGGCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytosine/Adenosine Deaminase; Cytidine/Deoxycytidylate Deaminase; Purine Deaminase Protein; Guanine Deaminase; Cytidine And Deoxycytidylate Deaminase
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNINTVRHAETELGRRAADAYPPEFLWSCTLVSTGEP CAMCTGTLYWANIGRLVYGFEETKLLTLTGDHAENPTMNLSSRTVLDSGQKPVEVHGPIPEMEEELLAPHIGFWQR
Sequences:
>Translated_156_residues MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNINTVRHAETELGRRAADAYPPEFLWSCTLVSTGEP CAMCTGTLYWANIGRLVYGFEETKLLTLTGDHAENPTMNLSSRTVLDSGQKPVEVHGPIPEMEEELLAPHIGFWQR >Mature_155_residues TRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNINTVRHAETELGRRAADAYPPEFLWSCTLVSTGEPC AMCTGTLYWANIGRLVYGFEETKLLTLTGDHAENPTMNLSSRTVLDSGQKPVEVHGPIPEMEEELLAPHIGFWQR
Specific function: Unknown
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17319; Mature: 17188
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNINTVRHAETELGRRA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHH ADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETKLLTLTGDHAENPTMNL CCCCCCCCEEEEEEECCCCCHHHHCCCHHEECCCCEEECCCCCEEEEEECCCCCCCCCCC SSRTVLDSGQKPVEVHGPIPEMEEELLAPHIGFWQR CCCEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TRDQMFAHLRAANDVAREAAAHGHHPFGCVLVGPDDHILMRQGNINTVRHAETELGRRA CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHH ADAYPPEFLWSCTLVSTGEPCAMCTGTLYWANIGRLVYGFEETKLLTLTGDHAENPTMNL CCCCCCCCEEEEEEECCCCCHHHHCCCHHEECCCCEEECCCCCEEEEEECCCCCCCCCCC SSRTVLDSGQKPVEVHGPIPEMEEELLAPHIGFWQR CCCEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA