Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472235

Identifier: 13472235

GI number: 13472235

Start: 1998139

End: 1999197

Strand: Reverse

Name: 13472235

Synonym: mll2462

Alternate gene names: NA

Gene position: 1999197-1998139 (Counterclockwise)

Preceding gene: 13472236

Following gene: 13472234

Centisome position: 28.41

GC content: 66.29

Gene sequence:

>1059_bases
ATGTCCGAAACACATTCGCATCTTTGGCCCGGCGTACCGCTCGCCCTTGGCTCGGCCGCTCTGTTCGGCGCGACCCCGCC
GCTTTCCAAGCTGCTGCTCGATGCCGTGAACCCCTTCATGCTGGCCGGACTGCTCTATCTCGGCGCCGGTCTCGGCCTCG
CTCTCTATCGCTTGCTTGGCGGCAAGCAGGCGGCGGCTGGTGAAGCGCAACTGGCCGCCCGGGATATCCCCTGGCTGGCC
CTGGCAATCGGCATGGGTGGCATCCTCGCGCCGGTGCTGTTGATGTTCGGCCTCAGCCGCAACACGGCATCCAGTTCAGC
GCTGCTGCTCAACCTGGAAGGGCTGGCGACGATGGCGATCGCCTGGCTCGTCTATCGCGAGAATGTCGACCGGCGCCTGC
TTTTTGGCGCCTTCGCCATTCTCGCGGGCGCGGTGCTGTTGTCGTGGGACGGCGGCGGCATTGCTTTCAACCCGGGCGCC
CTGCTGGTGGCGGGGGCTTGCGTGGCCTGGGGGCTGGACAACAATTTCACGCGCAGGATCTCGGCCACCGACCCCGTGGT
GATCGCCATGCTGAAAGGCCTGGTGGCGGGTGCGGCCAATGTCGGGTTGGCGCTTGCCGCCGGGGCGTCGTTTCCCGCGA
TGTCGATTGTCGCGGCCACGGCCGCGGTCGGCTTCCTCGGCATCGGCGTCAGCCTGGCGATGTTCATCCTGGCGCTGCGC
CATCTCGGGACGGCGCGCACAGGCGCCTATTATTCGCTCGCTCCGTTCATCGGCGCGCTGCTGGCCATCGTCATGCTGGG
CGATGCCGTCACCTTCAAACTGGTGGTCGCGGGGCTTCTGATGGGCGTCGGCCTGTGGCTGCATCTGTCGGAACGCCATG
AGCACGAGCACGACCATGAGGCGCTGGAACATGAGCACAGCCATGTGCATGACGAGCACCACCAGCACGATCATGACGGG
CCGGTGAGCGAGCCGCATTCGCATTGGCACCGTCATGCGCCGATGCGCCACCGGCATCCGCACTATCCAGACCTGCATCA
TCGGCATAGCCACGGCTGA

Upstream 100 bases:

>100_bases
GCCTGTGCGAAGAATGGGCGCTGTTTCGCGACAACAAATGCGTCGGGCCAAAGGCGGCCATGCGCGGCAAATGACATGCG
CGCTGTCATAGGGTGAGATG

Downstream 100 bases:

>100_bases
GCACGCCAAGATCATGCTCAAGCAAACGCCCAAGCCTGAACTGACCGTCTGGTACAACACGCGTTGCCCTGTCTGCGATG
CGGGCATCAGCTGGCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLA
LAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGA
LLVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR
HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDG
PVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG

Sequences:

>Translated_352_residues
MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLA
LAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGA
LLVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR
HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDG
PVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG
>Mature_351_residues
SETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLGGKQAAAGEAQLAARDIPWLAL
AIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAIAWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGAL
LVAGACVAWGLDNNFTRRISATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALRH
LGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHEALEHEHSHVHDEHHQHDHDGP
VSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 37153; Mature: 37021

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLG
CCCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
GKQAAAGEAQLAARDIPWLALAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAI
CCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH
AWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGALLVAGACVAWGLDNNFTRRI
HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHCCCCCCCEEEE
SATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR
CCCCHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHE
HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHH
ALEHEHSHVHDEHHQHDHDGPVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG
HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETHSHLWPGVPLALGSAALFGATPPLSKLLLDAVNPFMLAGLLYLGAGLGLALYRLLG
CCCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
GKQAAAGEAQLAARDIPWLALAIGMGGILAPVLLMFGLSRNTASSSALLLNLEGLATMAI
CCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHH
AWLVYRENVDRRLLFGAFAILAGAVLLSWDGGGIAFNPGALLVAGACVAWGLDNNFTRRI
HHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHCCCCCCCEEEE
SATDPVVIAMLKGLVAGAANVGLALAAGASFPAMSIVAATAAVGFLGIGVSLAMFILALR
CCCCHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLGTARTGAYYSLAPFIGALLAIVMLGDAVTFKLVVAGLLMGVGLWLHLSERHEHEHDHE
HHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHHH
ALEHEHSHVHDEHHQHDHDGPVSEPHSHWHRHAPMRHRHPHYPDLHHRHSHG
HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]