Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472224

Identifier: 13472224

GI number: 13472224

Start: 1988499

End: 1989101

Strand: Reverse

Name: 13472224

Synonym: mll2445

Alternate gene names: NA

Gene position: 1989101-1988499 (Counterclockwise)

Preceding gene: 13472226

Following gene: 13472218

Centisome position: 28.27

GC content: 65.34

Gene sequence:

>603_bases
ATGAAGACCGTAACCGGACTGTTCGACAATTATGACGATGCTTCCGACGCCGTCGGTGAATTGGAAGCTAGCGGTGTGCC
GCACGACGACATCAGCATTGTTTCCGGCAATGCCGACAATCAGCACAACAATGACGGCTCCAAGGTCGCGGACGACGCCG
CCGGCGGCGCAGGTCTGGGAGCAGCGATCGGCGGTGCCGGTGGGCTGCTCGCCGGACTTGGCCTGATGGCTATTCCCGGC
GTCGGTCCGGTGGTGGCCGCCGGCTGGCTGGCTGCCACTGCGGTCGGTGCCGTTGGCGGTGCCGTTGTTGGCGGTGCGGC
TGGCGGCATCGTCGGGGCGCTCACCGATTCCGGTGTCCCGGAACATGATGCCCATGTCTACGCCGAGGGCGTGCGTCGCG
GCGGCACGCTGGTCACGGCCAAGGTCGATGATCAGTTGGTGCCGGCGGCCGAAAGGATCCTGGGCCAGGCTAATTCTGTC
AACCTGCAGGAACGGCGTGGCGAATACCAGGCCGACGGTTGGACCGGCTTCGATCCGGACGCGGAGAACTACCGCTCGAA
TGAAATCGGCCGCGACGGCGCTCGCGACGTGAACCGAGTTTGA

Upstream 100 bases:

>100_bases
CAGGCCAACAAGGATGGCAAGAACACCACCGTGGCGCTGGACTACAAGGGCAACGTCGTTGCCGGCACCAACTGAAACTG
AGATCCAGGAGATCGAAATC

Downstream 100 bases:

>100_bases
TAGACAGGCCTCGCCGCCGAAAGGCGGCGGGGCCATTTTGCCGAACAGCCTTTGGCTAGAGCAATTCTAGGAAAAGTGTA
AGCGGTTTTCCCGGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKTVTGLFDNYDDASDAVGELEASGVPHDDISIVSGNADNQHNNDGSKVADDAAGGAGLGAAIGGAGGLLAGLGLMAIPG
VGPVVAAGWLAATAVGAVGGAVVGGAAGGIVGALTDSGVPEHDAHVYAEGVRRGGTLVTAKVDDQLVPAAERILGQANSV
NLQERRGEYQADGWTGFDPDAENYRSNEIGRDGARDVNRV

Sequences:

>Translated_200_residues
MKTVTGLFDNYDDASDAVGELEASGVPHDDISIVSGNADNQHNNDGSKVADDAAGGAGLGAAIGGAGGLLAGLGLMAIPG
VGPVVAAGWLAATAVGAVGGAVVGGAAGGIVGALTDSGVPEHDAHVYAEGVRRGGTLVTAKVDDQLVPAAERILGQANSV
NLQERRGEYQADGWTGFDPDAENYRSNEIGRDGARDVNRV
>Mature_200_residues
MKTVTGLFDNYDDASDAVGELEASGVPHDDISIVSGNADNQHNNDGSKVADDAAGGAGLGAAIGGAGGLLAGLGLMAIPG
VGPVVAAGWLAATAVGAVGGAVVGGAAGGIVGALTDSGVPEHDAHVYAEGVRRGGTLVTAKVDDQLVPAAERILGQANSV
NLQERRGEYQADGWTGFDPDAENYRSNEIGRDGARDVNRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19829; Mature: 19829

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVTGLFDNYDDASDAVGELEASGVPHDDISIVSGNADNQHNNDGSKVADDAAGGAGLG
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCH
AAIGGAGGLLAGLGLMAIPGVGPVVAAGWLAATAVGAVGGAVVGGAAGGIVGALTDSGVP
HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCC
EHDAHVYAEGVRRGGTLVTAKVDDQLVPAAERILGQANSVNLQERRGEYQADGWTGFDPD
CCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCC
AENYRSNEIGRDGARDVNRV
HHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKTVTGLFDNYDDASDAVGELEASGVPHDDISIVSGNADNQHNNDGSKVADDAAGGAGLG
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCH
AAIGGAGGLLAGLGLMAIPGVGPVVAAGWLAATAVGAVGGAVVGGAAGGIVGALTDSGVP
HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCC
EHDAHVYAEGVRRGGTLVTAKVDDQLVPAAERILGQANSVNLQERRGEYQADGWTGFDPD
CCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCC
AENYRSNEIGRDGARDVNRV
HHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA