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The map label for this gene is yiaD [C]

Identifier: 13472168

GI number: 13472168

Start: 1926221

End: 1927321

Strand: Reverse

Name: yiaD [C]

Synonym: mll2374

Alternate gene names: 13472168

Gene position: 1927321-1926221 (Counterclockwise)

Preceding gene: 13472171

Following gene: 13472167

Centisome position: 27.39

GC content: 63.67

Gene sequence:

>1101_bases
ATGTTCGAAGTCGTCGCATTCTGTCGAAAAGTGCGCGCGAAGGCCGGAGCCTTTAGTTTGGTCCTGGCCGCGCTGTTGGG
CTTGCTGTTGCTCCAACCGCACGCCGCCAACGCCGCGCCGAACTGGACGCTCGATCCCGACGCCTCGGTGCTCACCTATC
AGTCGGTCAAGAAGAACACGATCGTCGAGACCAACAAGATCAGGAATATCACCGGCACGCTGAGTTCCGCCGGTGACGCC
AAGGTCAGCTTCGATCTCAATTCCGTCGACACGGGCGTCGACCTGCGCAATGTGCGCATGCGTTTCCTGTTCTTCGAAAC
ATTCAAGTATCCGACGGCCGAGCTGACGGCGAAGGTCGACCCGGCCGCATTTGCCGACTTGCCGGCCAAACGCCGGATCA
AGGCAAGCTTGCCGTTCCGGCTGAGCCTGCACGGCGTCGATAAGGATCTGGAGGCGAGCGTCGTCGTAACCATGATCAGC
GACACTCAGGTCTCTGTCGCGTCGGAGGCCCCCGTCGCGGTGCATGTCGAGGATTTCGGCCTGCTGCCGAACGTCGACAA
GCTGCAGCAGGCCGCCAATGTGACGAACATCGTGCCCACCGCCTCGGTGTCCTTCGACTTCGTCTTTATCGCTGACGGCA
GCAAGCCGGCCGCGGTGCAGACAGTCGCTGCCGGCACCACCGGTGTCGGTCCCGTGGCCACTGACGCGGCGAAGGCCAAT
TTCAGCGACGAGGAGTGCCTCAATCGGTTTGCCGTGTTGTCGCGCACCGGCGCCATCTACTTTCGTCCGGCCAGCGCCCG
GCTCGATGCCAAGAGCCGTCCGCTGCTCACCGAAGTTGAAGGTGTCGTCGGCAAATGCCCTACCTTGAAGGTGGAGGTCT
CCGGCTACACGGACTCGGACGGCTCGCCCGAGGCCAACAAGGCGCTCTCCGAACGGCGCGCGCAGGCGGTTGCCGAAGCG
TTGGTCGCCGGCGGCGTGCCGCGGCAGCAGATCAGTGCCGCCGGCCATGGCGAGGAGAACCCGGTTGCCGCCAATGACAC
GCCGAAGAACAAGGCGCTCAACCGGCGGATCGAATTCTCCGCCACGAAGCTCGCGAACTGA

Upstream 100 bases:

>100_bases
GCTACCATGGCCTGCCGTAACCGCTCGCCAAGCGAGGGCAAGTGCTCTATGCTCCCATCTCCTGCGGTATCGAGATAGGT
TGTCCTGGCGGGGGCGTTCC

Downstream 100 bases:

>100_bases
GGTCGGGGTGGGTTCCCGCACATTCGCGTTTTGCGCCGTCTTGCTTCGCGGCGCCGGCCTTGTCGCGCTTGTCCTGCTTT
TGACTTTGACGGCCGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MFEVVAFCRKVRAKAGAFSLVLAALLGLLLLQPHAANAAPNWTLDPDASVLTYQSVKKNTIVETNKIRNITGTLSSAGDA
KVSFDLNSVDTGVDLRNVRMRFLFFETFKYPTAELTAKVDPAAFADLPAKRRIKASLPFRLSLHGVDKDLEASVVVTMIS
DTQVSVASEAPVAVHVEDFGLLPNVDKLQQAANVTNIVPTASVSFDFVFIADGSKPAAVQTVAAGTTGVGPVATDAAKAN
FSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSDGSPEANKALSERRAQAVAEA
LVAGGVPRQQISAAGHGEENPVAANDTPKNKALNRRIEFSATKLAN

Sequences:

>Translated_366_residues
MFEVVAFCRKVRAKAGAFSLVLAALLGLLLLQPHAANAAPNWTLDPDASVLTYQSVKKNTIVETNKIRNITGTLSSAGDA
KVSFDLNSVDTGVDLRNVRMRFLFFETFKYPTAELTAKVDPAAFADLPAKRRIKASLPFRLSLHGVDKDLEASVVVTMIS
DTQVSVASEAPVAVHVEDFGLLPNVDKLQQAANVTNIVPTASVSFDFVFIADGSKPAAVQTVAAGTTGVGPVATDAAKAN
FSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSDGSPEANKALSERRAQAVAEA
LVAGGVPRQQISAAGHGEENPVAANDTPKNKALNRRIEFSATKLAN
>Mature_366_residues
MFEVVAFCRKVRAKAGAFSLVLAALLGLLLLQPHAANAAPNWTLDPDASVLTYQSVKKNTIVETNKIRNITGTLSSAGDA
KVSFDLNSVDTGVDLRNVRMRFLFFETFKYPTAELTAKVDPAAFADLPAKRRIKASLPFRLSLHGVDKDLEASVVVTMIS
DTQVSVASEAPVAVHVEDFGLLPNVDKLQQAANVTNIVPTASVSFDFVFIADGSKPAAVQTVAAGTTGVGPVATDAAKAN
FSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSDGSPEANKALSERRAQAVAEA
LVAGGVPRQQISAAGHGEENPVAANDTPKNKALNRRIEFSATKLAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=106, Percent_Identity=40.5660377358491, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787191, Length=78, Percent_Identity=46.1538461538462, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 38782; Mature: 38782

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEVVAFCRKVRAKAGAFSLVLAALLGLLLLQPHAANAAPNWTLDPDASVLTYQSVKKNT
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHCCCC
IVETNKIRNITGTLSSAGDAKVSFDLNSVDTGVDLRNVRMRFLFFETFKYPTAELTAKVD
EEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEHHCCCCHHEEEECC
PAAFADLPAKRRIKASLPFRLSLHGVDKDLEASVVVTMISDTQVSVASEAPVAVHVEDFG
CHHHHCCCCHHCEEECCCEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCEEEEEECCC
LLPNVDKLQQAANVTNIVPTASVSFDFVFIADGSKPAAVQTVAAGTTGVGPVATDAAKAN
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHCC
FSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSD
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
GSPEANKALSERRAQAVAEALVAGGVPRQQISAAGHGEENPVAANDTPKNKALNRRIEFS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCEEEEC
ATKLAN
HHHCCC
>Mature Secondary Structure
MFEVVAFCRKVRAKAGAFSLVLAALLGLLLLQPHAANAAPNWTLDPDASVLTYQSVKKNT
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHCCCC
IVETNKIRNITGTLSSAGDAKVSFDLNSVDTGVDLRNVRMRFLFFETFKYPTAELTAKVD
EEECCCCCEEEECCCCCCCCEEEEECCCCCCCCCHHHHHEEEEEEEHHCCCCHHEEEECC
PAAFADLPAKRRIKASLPFRLSLHGVDKDLEASVVVTMISDTQVSVASEAPVAVHVEDFG
CHHHHCCCCHHCEEECCCEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCEEEEEECCC
LLPNVDKLQQAANVTNIVPTASVSFDFVFIADGSKPAAVQTVAAGTTGVGPVATDAAKAN
CCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHCC
FSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLLTEVEGVVGKCPTLKVEVSGYTDSD
CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
GSPEANKALSERRAQAVAEALVAGGVPRQQISAAGHGEENPVAANDTPKNKALNRRIEFS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCEEEEC
ATKLAN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]