| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472139
Identifier: 13472139
GI number: 13472139
Start: 1887142
End: 1888647
Strand: Direct
Name: 13472139
Synonym: mlr2338
Alternate gene names: NA
Gene position: 1887142-1888647 (Clockwise)
Preceding gene: 13472138
Following gene: 13472140
Centisome position: 26.82
GC content: 62.02
Gene sequence:
>1506_bases ATGGCCGAACAGCAAAAGACCGCAGCCGCTACCGCCGAGGCCGAAGCCATCGATCTTGGCGAGTTCAGCGGCCTCCTTGA AAAGGATTTCAAGGTCAAGAAGGACGACAGCGAGAAACTGCAGCAGTTGGTGCGCAACCTGGCGCTGGCCGCTCAGTCCC GCTCCGAGACGACGACCATCTCGTCCAATGCGATCAAGTCGATCAAGTCGCTGATCGCGGGCATCGACAAGATGCTGACG ACGCAGGTCAACGAGATCCTGCATGCCCCGGAAGTGCGGGAGATGGAAGGCACCTGGCGAGGCCTTTGGTACCTCATCAA CAACACCGAGACAGACACCAAGCTGAAGATCCGGGTGATGAACATCTCCAAGGAGCAGTTGGCCGACACGCTGGAAGACT ATGAAGGCCAGATGTGGGACCAGAGCCCGATCTTCAAGAAAGTCTACACGGACGAGTATTCGATGCTGGGCGGCGAGCCG ATCGGCTGCATCATCGGCGCCTACGAATTCTCCAACCATCCGCGCGACGTCGGCCTGCTGCGCAACATCTCGGGTGTCTG TGCCTCGGCGCACACGCCATTCATCGCGGCTGCCTCGCCGCGGCTGTTCCGTATGGACAGCTGGCAGGAACTGCCGAACC CGCAAGACCTGCAGATGATCGTCAACAACCCGGCCTATGCCTCATGGCAGTCGCTGCGCGAGAGCGAGGACGCCCGCTAT ATCGGGCTCACCATGCCGCGCGTGCTGGCACGCCTGCCCTACGGCTCGGAAACCGTTCCGGTGAAGGGCTTCACCTTCGA GGAAGAGGTGGGCGGCGACCACAACAAATATGTCTGGATGAACGCCGCCTTCCCGATGGGCGTCAACATCAACCGCAGCC ATAAGCTCTATGGCTGGGGAACGCAGATCCGCGGCGTCGAGAATGGCGGCACGGTGCTCAACCTGCCGGTGCACGCTTTC CCGACGGACGACGGTTCGATCGCAATGAAATGCCCGACCGAGGTCGCCATCGACGACCGGCGCGAGGCGGAATTGGCGAA GCTTGGCCTGATGCCGATCTTGCACCGCAAGAACACCGATCTCGCAGCCTTCATCGGCGCGCACTCGCTCCAGGATGACG AGACGCGCGCCGGGCGCCTCGTCGACCCCGACGCCCAGTCGAACGAACGGCTGAGCGCCAACCTGCCCTACCTCTTCCCG GTGTCGCGTTTCGCGCATTACCTCAAGGCGATCGCGCGCGACAAGATCGGATCGTTCAAGGAACGCACCGATATGGAGAT CTGGTTGACCGAATGGATCAACCGGTACGTGCTGGCCAATCCGGCCTTCGCCGACGACAAGGCGCGGGCCAAGCGTCCGC TTGCCGCTGCCGAGGTTCAGGTCGACAGCGTCGAAGGCCGGCCCGGTTACTACAACGCCCGTTTCTATCTGCGTCCGCAC TACCAGCTGGAAGGCATCAACGCTTCCCTCCGGCTGGTGTCGGAACTGCCGTCAGTGAAGGGCTGA
Upstream 100 bases:
>100_bases CGACGCCGAAAAGCGCATCGCGCAGCTTCTGAACAACGAGCCGCTGCTGAGCAAGATCGCCAGCCAGGCGATTTCTGACG GCAAGGGCGAGGAGTAAGTC
Downstream 100 bases:
>100_bases AGTCGCAGCGAAGTCATCTTGTTTCGTTTGAAAGCGGTGGAGAAAGACAATGCCGACCACAGAGAGAAGCGAGGCTCCTT CAATGAAGATCGATGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MAEQQKTAAATAEAEAIDLGEFSGLLEKDFKVKKDDSEKLQQLVRNLALAAQSRSETTTISSNAIKSIKSLIAGIDKMLT TQVNEILHAPEVREMEGTWRGLWYLINNTETDTKLKIRVMNISKEQLADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGEP IGCIIGAYEFSNHPRDVGLLRNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQDLQMIVNNPAYASWQSLRESEDARY IGLTMPRVLARLPYGSETVPVKGFTFEEEVGGDHNKYVWMNAAFPMGVNINRSHKLYGWGTQIRGVENGGTVLNLPVHAF PTDDGSIAMKCPTEVAIDDRREAELAKLGLMPILHRKNTDLAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANLPYLFP VSRFAHYLKAIARDKIGSFKERTDMEIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGYYNARFYLRPH YQLEGINASLRLVSELPSVKG
Sequences:
>Translated_501_residues MAEQQKTAAATAEAEAIDLGEFSGLLEKDFKVKKDDSEKLQQLVRNLALAAQSRSETTTISSNAIKSIKSLIAGIDKMLT TQVNEILHAPEVREMEGTWRGLWYLINNTETDTKLKIRVMNISKEQLADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGEP IGCIIGAYEFSNHPRDVGLLRNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQDLQMIVNNPAYASWQSLRESEDARY IGLTMPRVLARLPYGSETVPVKGFTFEEEVGGDHNKYVWMNAAFPMGVNINRSHKLYGWGTQIRGVENGGTVLNLPVHAF PTDDGSIAMKCPTEVAIDDRREAELAKLGLMPILHRKNTDLAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANLPYLFP VSRFAHYLKAIARDKIGSFKERTDMEIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGYYNARFYLRPH YQLEGINASLRLVSELPSVKG >Mature_500_residues AEQQKTAAATAEAEAIDLGEFSGLLEKDFKVKKDDSEKLQQLVRNLALAAQSRSETTTISSNAIKSIKSLIAGIDKMLTT QVNEILHAPEVREMEGTWRGLWYLINNTETDTKLKIRVMNISKEQLADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGEPI GCIIGAYEFSNHPRDVGLLRNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQDLQMIVNNPAYASWQSLRESEDARYI GLTMPRVLARLPYGSETVPVKGFTFEEEVGGDHNKYVWMNAAFPMGVNINRSHKLYGWGTQIRGVENGGTVLNLPVHAFP TDDGSIAMKCPTEVAIDDRREAELAKLGLMPILHRKNTDLAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANLPYLFPV SRFAHYLKAIARDKIGSFKERTDMEIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGYYNARFYLRPHY QLEGINASLRLVSELPSVKG
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56115; Mature: 55984
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQQKTAAATAEAEAIDLGEFSGLLEKDFKVKKDDSEKLQQLVRNLALAAQSRSETTTI CCCCHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE SSNAIKSIKSLIAGIDKMLTTQVNEILHAPEVREMEGTWRGLWYLINNTETDTKLKIRVM CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCCEEEEEEE NISKEQLADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGEPIGCIIGAYEFSNHPRDVGLL CCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEEEHHHCCCCCHHHHH RNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQDLQMIVNNPAYASWQSLRESEDARY HHHHHHHHCCCCCEEEECCCCEEECCCHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE IGLTMPRVLARLPYGSETVPVKGFTFEEEVGGDHNKYVWMNAAFPMGVNINRSHKLYGWG EEEEHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECC TQIRGVENGGTVLNLPVHAFPTDDGSIAMKCPTEVAIDDRREAELAKLGLMPILHRKNTD CEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHCCCCCC LAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANLPYLFPVSRFAHYLKAIARDKIGSFK CEEEHHCCCCCCCCCCCCCEECCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHCCCHH ERTDMEIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGYYNARFYLRPH HHCCCEEHHHHHHHHHEECCCCCCCCHHHHHCCCEEHEEEEECCCCCCCEEEEEEEEECC YQLEGINASLRLVSELPSVKG EEEECCCHHHHHHHHCCCCCC >Mature Secondary Structure AEQQKTAAATAEAEAIDLGEFSGLLEKDFKVKKDDSEKLQQLVRNLALAAQSRSETTTI CCCHHHHHHHCCCCEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE SSNAIKSIKSLIAGIDKMLTTQVNEILHAPEVREMEGTWRGLWYLINNTETDTKLKIRVM CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEECCCCCCEEEEEEE NISKEQLADTLEDYEGQMWDQSPIFKKVYTDEYSMLGGEPIGCIIGAYEFSNHPRDVGLL CCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHCCCCCCEEEEEEHHHCCCCCHHHHH RNISGVCASAHTPFIAAASPRLFRMDSWQELPNPQDLQMIVNNPAYASWQSLRESEDARY HHHHHHHHCCCCCEEEECCCCEEECCCHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE IGLTMPRVLARLPYGSETVPVKGFTFEEEVGGDHNKYVWMNAAFPMGVNINRSHKLYGWG EEEEHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECC TQIRGVENGGTVLNLPVHAFPTDDGSIAMKCPTEVAIDDRREAELAKLGLMPILHRKNTD CEEEEECCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHCCCCCC LAAFIGAHSLQDDETRAGRLVDPDAQSNERLSANLPYLFPVSRFAHYLKAIARDKIGSFK CEEEHHCCCCCCCCCCCCCEECCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHCCCHH ERTDMEIWLTEWINRYVLANPAFADDKARAKRPLAAAEVQVDSVEGRPGYYNARFYLRPH HHCCCEEHHHHHHHHHEECCCCCCCCHHHHHCCCEEHEEEEECCCCCCCEEEEEEEEECC YQLEGINASLRLVSELPSVKG EEEECCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA