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The map label for this gene is ycjO [C]

Identifier: 13472129

GI number: 13472129

Start: 1876685

End: 1877644

Strand: Direct

Name: ycjO [C]

Synonym: mlr2327

Alternate gene names: 13472129

Gene position: 1876685-1877644 (Clockwise)

Preceding gene: 13472128

Following gene: 13472130

Centisome position: 26.67

GC content: 61.15

Gene sequence:

>960_bases
GTGACGATCGTGACCGGCAAGACCGAGGCTCGCCGAAGATTGCAACCCGGTAAATCTGGCGTGCTGCGCAAGATCTGGGA
GCATCGCGCCGACTATGCGTACGTGCTCCCCGCGATCGCCGTGATGCTCATCGTCATTGCCTATCCGATCTACTACACGA
TCGAGCTGTCGTTCTTTAATACGCCGCCTGGCCTGCAGCTCCGCGACAAGACCTTCGTCGGCTTCAACAATTACACGGCC
ATCCTCACCAGTGCGGTGTTCTGGAAGGTCACCTGGAACACGCTGATCTGGACGGTGGGGTCCACCGGCATCTCCTTCGT
CCTGGGGTTTGCCGCCGCGCTGGCACTCCACCGTGACTTTTTCGGCCGTGGCGTCCTGCGCGCCATCCTGATCATTCCCT
GGGTCATCAGCGCGGTCGCCGCCTCCTATATCTGGAAGTGGATCTACCACTCGGACTTCGGCATCATCGGCGCGGTGCTG
GTCGGCCTCGGACTGGCCGACCGGCCGCCGAATTTCATCGACAGCGTCTCGACGGTGCTGCCCTCGCTGATCGTCGTCAA
CATCTGGCGCGAATTTCCGTTTGCCATGATCATGATGATGGCCGGCCTGCAGACGGTTCCCGACCAGTTGCTGCGCGCCG
CCAAAGTCGACGGGGCCAATGCGTGGCAGCGCTTCTGGCACGTCACCTTCCCGCATTTGAGAAACGTCTCGACTGTGACG
ATCCTGCTGCTGGCTGTCGCCAACTTCAACTCCTTCATCATACCCTGGATCATGACCGGCGGCGGTCCGTCGAACGCATC
GCATATCTGGATCACCCACATCTATGAGCTCGCCTTCGGCCGGCAGCGCTGGGGGGTGGCGTCGGCCTACTCGGTGCTGC
TGTTCCTCATCCTGATGACGTTCGGCTACTTCTATGTCCGCGCGCTAAGCGGCAACGACAGGAAGGATGGCAGCGCATGA

Upstream 100 bases:

>100_bases
AAGACCTGATGGGCGGACTCTAGTCTAAGCCTGACCTGCGATCTTAACCGGCTGCTCCGAGGGTCAGCCGGTTCGTTCCG
AAGAACAAGGGCACGCCAAA

Downstream 100 bases:

>100_bases
GCACGATTGCCGAGACAGCCGCTCGAGGCCAGGCCCGTCGCCGCCTACGCTTCGACGGATGGCGGTGGGGCGGACGCATC
TTCCTCGTGTTCATGCTGCT

Product: permease protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTIVTGKTEARRRLQPGKSGVLRKIWEHRADYAYVLPAIAVMLIVIAYPIYYTIELSFFNTPPGLQLRDKTFVGFNNYTA
ILTSAVFWKVTWNTLIWTVGSTGISFVLGFAAALALHRDFFGRGVLRAILIIPWVISAVAASYIWKWIYHSDFGIIGAVL
VGLGLADRPPNFIDSVSTVLPSLIVVNIWREFPFAMIMMMAGLQTVPDQLLRAAKVDGANAWQRFWHVTFPHLRNVSTVT
ILLLAVANFNSFIIPWIMTGGGPSNASHIWITHIYELAFGRQRWGVASAYSVLLFLILMTFGYFYVRALSGNDRKDGSA

Sequences:

>Translated_319_residues
MTIVTGKTEARRRLQPGKSGVLRKIWEHRADYAYVLPAIAVMLIVIAYPIYYTIELSFFNTPPGLQLRDKTFVGFNNYTA
ILTSAVFWKVTWNTLIWTVGSTGISFVLGFAAALALHRDFFGRGVLRAILIIPWVISAVAASYIWKWIYHSDFGIIGAVL
VGLGLADRPPNFIDSVSTVLPSLIVVNIWREFPFAMIMMMAGLQTVPDQLLRAAKVDGANAWQRFWHVTFPHLRNVSTVT
ILLLAVANFNSFIIPWIMTGGGPSNASHIWITHIYELAFGRQRWGVASAYSVLLFLILMTFGYFYVRALSGNDRKDGSA
>Mature_318_residues
TIVTGKTEARRRLQPGKSGVLRKIWEHRADYAYVLPAIAVMLIVIAYPIYYTIELSFFNTPPGLQLRDKTFVGFNNYTAI
LTSAVFWKVTWNTLIWTVGSTGISFVLGFAAALALHRDFFGRGVLRAILIIPWVISAVAASYIWKWIYHSDFGIIGAVLV
GLGLADRPPNFIDSVSTVLPSLIVVNIWREFPFAMIMMMAGLQTVPDQLLRAAKVDGANAWQRFWHVTFPHLRNVSTVTI
LLLAVANFNSFIIPWIMTGGGPSNASHIWITHIYELAFGRQRWGVASAYSVLLFLILMTFGYFYVRALSGNDRKDGSA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=254, Percent_Identity=33.0708661417323, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790465, Length=244, Percent_Identity=29.9180327868852, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789861, Length=237, Percent_Identity=24.0506329113924, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35740; Mature: 35609

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVTGKTEARRRLQPGKSGVLRKIWEHRADYAYVLPAIAVMLIVIAYPIYYTIELSFFN
CEEECCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEC
TPPGLQLRDKTFVGFNNYTAILTSAVFWKVTWNTLIWTVGSTGISFVLGFAAALALHRDF
CCCCCEECCCEEECCCCHHHHHHHHHHHEEEHHHHEEECCCHHHHHHHHHHHHHHHHHHH
FGRGVLRAILIIPWVISAVAASYIWKWIYHSDFGIIGAVLVGLGLADRPPNFIDSVSTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
PSLIVVNIWREFPFAMIMMMAGLQTVPDQLLRAAKVDGANAWQRFWHVTFPHLRNVSTVT
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHH
ILLLAVANFNSFIIPWIMTGGGPSNASHIWITHIYELAFGRQRWGVASAYSVLLFLILMT
HHHHHHHCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH
FGYFYVRALSGNDRKDGSA
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TIVTGKTEARRRLQPGKSGVLRKIWEHRADYAYVLPAIAVMLIVIAYPIYYTIELSFFN
EEECCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEC
TPPGLQLRDKTFVGFNNYTAILTSAVFWKVTWNTLIWTVGSTGISFVLGFAAALALHRDF
CCCCCEECCCEEECCCCHHHHHHHHHHHEEEHHHHEEECCCHHHHHHHHHHHHHHHHHHH
FGRGVLRAILIIPWVISAVAASYIWKWIYHSDFGIIGAVLVGLGLADRPPNFIDSVSTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
PSLIVVNIWREFPFAMIMMMAGLQTVPDQLLRAAKVDGANAWQRFWHVTFPHLRNVSTVT
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCHHHHH
ILLLAVANFNSFIIPWIMTGGGPSNASHIWITHIYELAFGRQRWGVASAYSVLLFLILMT
HHHHHHHCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH
FGYFYVRALSGNDRKDGSA
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA