Click here to switch to the map view.

The map label for this gene is 13472128

Identifier: 13472128

GI number: 13472128

Start: 1875198

End: 1876607

Strand: Direct

Name: 13472128

Synonym: mlr2326

Alternate gene names: NA

Gene position: 1875198-1876607 (Clockwise)

Preceding gene: 13472120

Following gene: 13472129

Centisome position: 26.65

GC content: 60.57

Gene sequence:

>1410_bases
ATGTCCGCACCGGCTCTGGGCGCGGCGCCGGTCGACTTGAGCAAGTGGTCGCCTGAATATGTGCGCTCCATTGCGGGCAC
GCAGGAATTTGATACCGCGGCCGATTGCGCCAAGGTCACCCCGCTCGACTACAAGGGGCGACTGACCTTCTGGTATCAGG
GCGTGTTCGAGGGCGACCCCGATCTCTTGCGCCAGTACTACAAGGATTTCTTCGAGACCTTCCGCAAGACCTATCCGAAC
ATCCAGCTCGAGGAACAGGCCCTCACCTACAACGACCTCCTGGACAAGTTCCGCACGGCGCTGCTTGGCAATGCGGCGCC
GATGGCGGTCCGCCTGCAAATCCTGGGTGGCACCGAGTTCGCATCAAAGGGCTATCTGCAGCCGCTGAAGCCCGAGGATG
TAGGGTATTCGACCGATGATTTCTGGCCCGGCGCCATGAAAGCCGTGACCTGGGACGGCGTGACCTACGGCATTCCAACC
AACAATGAAACGATGGCGTTCATCTGGAATGCCGATATCTTCAAGCGCGCGGGTCTCGATCCGGACAAGGCTCCGGCAAC
CTGGGACGATGTCGTCAAATATTCCAAGCAGATCCACGACAAGCTCGGCATTGCCGGTTACGGCCTCGTGGCTCGCAAGA
ATGCCGGCAATACCCCGTATCGCTTCATGCCTCAATTGTGGGCCTATGGCGGCGGCGTCTTCGACGAAGCCACGGCGAAC
CCGACCTACAAGGAGATCGAGCTCGACAGCCCGCAGAGCAAGGCGGCGCTGCAAGCCTCTTACGACATGTATGTCCGCGA
CAAGTCGGTTCCGGTTTCGGCGCTCACCAACCAGCAGGCCGACAACCAGCCGCTGTTCCTCGCCGGCCAGCTCGGCATGA
TGATCTCGCACCCGTCCGACTATAATGTCATGCTCGACCTGCAGAAGAAGGCGACCGGCACCGACAAGGACAAGGCGCAG
ACCGTCATCGACAACATGCGCTACGGCCTGATCCCGACCGGCCCCGACGGCAAGCGCGCAGTCGTGTTCGGCGGCTCGAA
CATCCACATCCTGAAGCCCGAATATGTCGAGGGCGGCAAGGTGGATGAACCGGCCGCGAAGGCCATCATCTGCATGTGGA
CCAGCCCGGAATGGTCGCTGAAGATGGCCTATGCCGGCTCGAACCCGGGCAATCTCAACGGCTTCAAGACCAAGTGGATG
AAGGAACGCCTGGACAACATCAAGTTCCTCGATGTCACGACCTCGATGCTGCCATACGGCATCCCGTTCCCGGCGCTGCC
GCAATCTCCCGAGATCATGAACATCATCATCCCGGACATGCTGCAGAATGCCCTGACCGGAGCGATGACCGTCGATCAGG
CTGCGGACGACGCGGCCAAGAAAGTGAAAGACCTGATGGGCGGACTCTAG

Upstream 100 bases:

>100_bases
GCGGCATGGGAGAGAAACCTGGAGGATACCTATGACGAGGATCACACTCGGCGGTGCCGTCCTGCGCGGCACTGTCTCCA
CTGCATTGATCGCATCGTTG

Downstream 100 bases:

>100_bases
TCTAAGCCTGACCTGCGATCTTAACCGGCTGCTCCGAGGGTCAGCCGGTTCGTTCCGAAGAACAAGGGCACGCCAAAGTG
ACGATCGTGACCGGCAAGAC

Product: sugar binding protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSAPALGAAPVDLSKWSPEYVRSIAGTQEFDTAADCAKVTPLDYKGRLTFWYQGVFEGDPDLLRQYYKDFFETFRKTYPN
IQLEEQALTYNDLLDKFRTALLGNAAPMAVRLQILGGTEFASKGYLQPLKPEDVGYSTDDFWPGAMKAVTWDGVTYGIPT
NNETMAFIWNADIFKRAGLDPDKAPATWDDVVKYSKQIHDKLGIAGYGLVARKNAGNTPYRFMPQLWAYGGGVFDEATAN
PTYKEIELDSPQSKAALQASYDMYVRDKSVPVSALTNQQADNQPLFLAGQLGMMISHPSDYNVMLDLQKKATGTDKDKAQ
TVIDNMRYGLIPTGPDGKRAVVFGGSNIHILKPEYVEGGKVDEPAAKAIICMWTSPEWSLKMAYAGSNPGNLNGFKTKWM
KERLDNIKFLDVTTSMLPYGIPFPALPQSPEIMNIIIPDMLQNALTGAMTVDQAADDAAKKVKDLMGGL

Sequences:

>Translated_469_residues
MSAPALGAAPVDLSKWSPEYVRSIAGTQEFDTAADCAKVTPLDYKGRLTFWYQGVFEGDPDLLRQYYKDFFETFRKTYPN
IQLEEQALTYNDLLDKFRTALLGNAAPMAVRLQILGGTEFASKGYLQPLKPEDVGYSTDDFWPGAMKAVTWDGVTYGIPT
NNETMAFIWNADIFKRAGLDPDKAPATWDDVVKYSKQIHDKLGIAGYGLVARKNAGNTPYRFMPQLWAYGGGVFDEATAN
PTYKEIELDSPQSKAALQASYDMYVRDKSVPVSALTNQQADNQPLFLAGQLGMMISHPSDYNVMLDLQKKATGTDKDKAQ
TVIDNMRYGLIPTGPDGKRAVVFGGSNIHILKPEYVEGGKVDEPAAKAIICMWTSPEWSLKMAYAGSNPGNLNGFKTKWM
KERLDNIKFLDVTTSMLPYGIPFPALPQSPEIMNIIIPDMLQNALTGAMTVDQAADDAAKKVKDLMGGL
>Mature_468_residues
SAPALGAAPVDLSKWSPEYVRSIAGTQEFDTAADCAKVTPLDYKGRLTFWYQGVFEGDPDLLRQYYKDFFETFRKTYPNI
QLEEQALTYNDLLDKFRTALLGNAAPMAVRLQILGGTEFASKGYLQPLKPEDVGYSTDDFWPGAMKAVTWDGVTYGIPTN
NETMAFIWNADIFKRAGLDPDKAPATWDDVVKYSKQIHDKLGIAGYGLVARKNAGNTPYRFMPQLWAYGGGVFDEATANP
TYKEIELDSPQSKAALQASYDMYVRDKSVPVSALTNQQADNQPLFLAGQLGMMISHPSDYNVMLDLQKKATGTDKDKAQT
VIDNMRYGLIPTGPDGKRAVVFGGSNIHILKPEYVEGGKVDEPAAKAIICMWTSPEWSLKMAYAGSNPGNLNGFKTKWMK
ERLDNIKFLDVTTSMLPYGIPFPALPQSPEIMNIIIPDMLQNALTGAMTVDQAADDAAKKVKDLMGGL

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51785; Mature: 51654

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPALGAAPVDLSKWSPEYVRSIAGTQEFDTAADCAKVTPLDYKGRLTFWYQGVFEGDP
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCH
DLLRQYYKDFFETFRKTYPNIQLEEQALTYNDLLDKFRTALLGNAAPMAVRLQILGGTEF
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
ASKGYLQPLKPEDVGYSTDDFWPGAMKAVTWDGVTYGIPTNNETMAFIWNADIFKRAGLD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCHHHHHCCCC
PDKAPATWDDVVKYSKQIHDKLGIAGYGLVARKNAGNTPYRFMPQLWAYGGGVFDEATAN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
PTYKEIELDSPQSKAALQASYDMYVRDKSVPVSALTNQQADNQPLFLAGQLGMMISHPSD
CCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHCCCCCCCCCEEEEECCCEEEECCCC
YNVMLDLQKKATGTDKDKAQTVIDNMRYGLIPTGPDGKRAVVFGGSNIHILKPEYVEGGK
CEEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEEECCCEEEEECCCCCCCCC
VDEPAAKAIICMWTSPEWSLKMAYAGSNPGNLNGFKTKWMKERLDNIKFLDVTTSMLPYG
CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCC
IPFPALPQSPEIMNIIIPDMLQNALTGAMTVDQAADDAAKKVKDLMGGL
CCCCCCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAPALGAAPVDLSKWSPEYVRSIAGTQEFDTAADCAKVTPLDYKGRLTFWYQGVFEGDP
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEECCCH
DLLRQYYKDFFETFRKTYPNIQLEEQALTYNDLLDKFRTALLGNAAPMAVRLQILGGTEF
HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
ASKGYLQPLKPEDVGYSTDDFWPGAMKAVTWDGVTYGIPTNNETMAFIWNADIFKRAGLD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCEEEEEECCHHHHHCCCC
PDKAPATWDDVVKYSKQIHDKLGIAGYGLVARKNAGNTPYRFMPQLWAYGGGVFDEATAN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
PTYKEIELDSPQSKAALQASYDMYVRDKSVPVSALTNQQADNQPLFLAGQLGMMISHPSD
CCEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHCCCCCCCCCEEEEECCCEEEECCCC
YNVMLDLQKKATGTDKDKAQTVIDNMRYGLIPTGPDGKRAVVFGGSNIHILKPEYVEGGK
CEEEEEEECCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEEEECCCEEEEECCCCCCCCC
VDEPAAKAIICMWTSPEWSLKMAYAGSNPGNLNGFKTKWMKERLDNIKFLDVTTSMLPYG
CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCC
IPFPALPQSPEIMNIIIPDMLQNALTGAMTVDQAADDAAKKVKDLMGGL
CCCCCCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA