| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hcrA [H]
Identifier: 13472099
GI number: 13472099
Start: 1846017
End: 1848281
Strand: Reverse
Name: hcrA [H]
Synonym: mll2287
Alternate gene names: 13472099
Gene position: 1848281-1846017 (Counterclockwise)
Preceding gene: 13472100
Following gene: 13472098
Centisome position: 26.27
GC content: 66.58
Gene sequence:
>2265_bases ATGAATTTCGATCCGCGTTTTTCCGGGCGTAAATTCGCATCCGTCGGCACGCGCCCCATCCGCCCCGACGGCGTCGACAA GGTGACGGGCCGCGCCCGCTACGGCGCCGACTTCAACATGGCCGGCCAGCTGGTCGGCCGCGTTCTGCGCAGCCCGCATG CGCACGCCAAGATCCTCAAGATCGACACGTCGAAGGCGGAAAAGCTGAACGGCGTGAAGGCGGTGATCACGGCGAAAGAC CTGCCCGACCTCACCGATGGCGATGCCGCCATGTACGACATCCTCGACAATTGCATGGCGCGCACCAAGGCGCTCTATGA CGGCCATGCGGTGGCCGCGGTCGCCGCGGTCGATGCCCGTACGGCAAGGCAGGCGCTGAAGCTGATCGAGGTCGAGTACG AGATCCTGCCGCATGTCACCGATGTCGACGAGGCGATGCAGCACCACGCGCCGCTGATCAACGACACGATCTTCACCGAG GGGCTGGAGGAAAAGCCGGTAAAACCCTCCAACGTCACCAAGCGCAGCCAGTTCGGCCATGGCGACGTCCATCAGGGCTT TGGGCACGCCGACTTCATCGTCGAGCGCTCCTTCAAGACCGAGCAGACGCACCAGGGCTATATCGAGCCGCATGCCTGCG TGGCGAGCGTCTCGTCCGACGGCACCGCCGACCTCTGGGTCTGCACGCAGGGCCATTTCGTCTACCGCCAGCACTGCGCC CAGCTGCTCGGCATGGAAGCCTCGAAGCTGCGCGTCACCTCGTCGGAGATCGGCGGCGGCTTCGGCGGCAAGACCCATGT CTGGGCCGAGCCGGTGGCGCTTGCCTTGTCACGCAAGGCCGGGCGGCCGGTGAAGCTGGTGATGACCCGCGACGAGGTGT TCCGCGCCTCAGGGCCAACCAGCGCCACCTCGATCGACGTCAAGATCGGCGCCCGCAAGGACGGCACCATCACTGCCGCC GAAGCGACGCTGCGCTACAGCGCCGGCCCCTATGCCGGCTCCTGGGCCGAGATCGGCGCCATGACGGCCTTCGCCTGCTA CAAGCTCGATAACGTCAAGACGGTCGGTTACGAAGTGCTGGTCAACCGGCCCAAGACCGCGGCCTATCGCGCGCCCTCCG CACCGATGGCGGCCTTCGCGGTGGAAAGTGCGGTCGACGAGCTCGCCAAGGAGCTCGGCATGGACCCGGTCGACTTCCGC ATCAAGAACGCCGCGCAGGAAGGAACACGCTCGTCCTACGGCCCGGTCTATGGCCCGATCGGCATCGGCCCGACGCTGGA AGCGGTGAAGCACCATCCGCACATGAAGGCGCCGCTCAAAAAGAACCAGGGCAGGGGCATGGCCTGCGGCTTCTGGTTCA ATTTCGGCGGCCAGACCTGCGTGGACCTCAACATCGGCATGGACGGCTCGGTCTCGCTCGCCGTCGGCACGGTGGACGTG GGCGGTTCCCGCGCGTCGCTGTCGCTGGTGGCGGCGGAGGAGCTCGGTATCGACTATGCCCAGCTCAAGGCGGTGGTCGC CGACACCTCTTCGCTCGGTTATAACGACATGACCGACGGCAGCCGCGGCACCTTCTCCTCCTCCATGGCGACCATCTCGG CCGCCCGCAACGCGATAAAAATCCTGCGCGAGCGCGCCGCGCAGATGTGGGACATTTCCGTCGACGACGTGGTCTGGGAA CTGGGCCATGCGGTCGCCAAGGGCGAGAAGCACGGCAATCTCGGCAAACTGTCGCTGAAGGAGATCGCGGCCCAGTCCGG CAAGACCGGCGGGCCGATCGCCGGCCACAGCGAGCTCGTCGCCGACGGCGCCGGCGTCTCCTTCGCCACCCACATATGCG ACATCGAGGTCGACCCCGAGACCGGCTCGACCCGGGTGATCCGCTACACGGTGGTGCAGGATGCCGGCAAGGCGGTGCAC CCGACCTATGTCGAGGGCCAGTACCAGGGCGGTGCGGCGCAAGGCATCGGCTGGGCGCTCAACGAGGAGTATATTTACGG CAAGGACGGAAGGCTGCAGAACGCCGGCTTCCTCGACTACCGCATCCCGGTGTGCTCCGACCTGCCGATGATCGACACGC AGATCCTGGAAATCCCCAACCCCAACCACCCCTATGGCGTGCGCGGCGTCGGCGAAACCTCGATCGTGCCGCCGCTGGCG GCGATCGCCAACGCGGTGTCGAACGCGGCCGGCGTGCGCATGACCCACATCCCGATGTCGCCGCCACGCATCCTGGCGGC CATCGAAGCGGAACGGGGAGAGTAG
Upstream 100 bases:
>100_bases TCCGCTTCGGCCTCGCCGGCAATCTCTGCCGCTGCACCGGCTATGACAAGATCGTGCGCGCCGTCCAGGACGCCGCAATT GTGATGAAGGGAGCCTGAAG
Downstream 100 bases:
>100_bases ATCTGGTCGAAGTCACCCTCTGGGGCGCGCTCGGCCAGCTCGCCGGCGGCAAGAGCAAGGTCGAGGTCGAGGCCAAGGAC ATCAGGGAACTGTTCAGGAA
Product: 4-hydroxybenzoyl-CoA reductase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MNFDPRFSGRKFASVGTRPIRPDGVDKVTGRARYGADFNMAGQLVGRVLRSPHAHAKILKIDTSKAEKLNGVKAVITAKD LPDLTDGDAAMYDILDNCMARTKALYDGHAVAAVAAVDARTARQALKLIEVEYEILPHVTDVDEAMQHHAPLINDTIFTE GLEEKPVKPSNVTKRSQFGHGDVHQGFGHADFIVERSFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCA QLLGMEASKLRVTSSEIGGGFGGKTHVWAEPVALALSRKAGRPVKLVMTRDEVFRASGPTSATSIDVKIGARKDGTITAA EATLRYSAGPYAGSWAEIGAMTAFACYKLDNVKTVGYEVLVNRPKTAAYRAPSAPMAAFAVESAVDELAKELGMDPVDFR IKNAAQEGTRSSYGPVYGPIGIGPTLEAVKHHPHMKAPLKKNQGRGMACGFWFNFGGQTCVDLNIGMDGSVSLAVGTVDV GGSRASLSLVAAEELGIDYAQLKAVVADTSSLGYNDMTDGSRGTFSSSMATISAARNAIKILRERAAQMWDISVDDVVWE LGHAVAKGEKHGNLGKLSLKEIAAQSGKTGGPIAGHSELVADGAGVSFATHICDIEVDPETGSTRVIRYTVVQDAGKAVH PTYVEGQYQGGAAQGIGWALNEEYIYGKDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLA AIANAVSNAAGVRMTHIPMSPPRILAAIEAERGE
Sequences:
>Translated_754_residues MNFDPRFSGRKFASVGTRPIRPDGVDKVTGRARYGADFNMAGQLVGRVLRSPHAHAKILKIDTSKAEKLNGVKAVITAKD LPDLTDGDAAMYDILDNCMARTKALYDGHAVAAVAAVDARTARQALKLIEVEYEILPHVTDVDEAMQHHAPLINDTIFTE GLEEKPVKPSNVTKRSQFGHGDVHQGFGHADFIVERSFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCA QLLGMEASKLRVTSSEIGGGFGGKTHVWAEPVALALSRKAGRPVKLVMTRDEVFRASGPTSATSIDVKIGARKDGTITAA EATLRYSAGPYAGSWAEIGAMTAFACYKLDNVKTVGYEVLVNRPKTAAYRAPSAPMAAFAVESAVDELAKELGMDPVDFR IKNAAQEGTRSSYGPVYGPIGIGPTLEAVKHHPHMKAPLKKNQGRGMACGFWFNFGGQTCVDLNIGMDGSVSLAVGTVDV GGSRASLSLVAAEELGIDYAQLKAVVADTSSLGYNDMTDGSRGTFSSSMATISAARNAIKILRERAAQMWDISVDDVVWE LGHAVAKGEKHGNLGKLSLKEIAAQSGKTGGPIAGHSELVADGAGVSFATHICDIEVDPETGSTRVIRYTVVQDAGKAVH PTYVEGQYQGGAAQGIGWALNEEYIYGKDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLA AIANAVSNAAGVRMTHIPMSPPRILAAIEAERGE >Mature_754_residues MNFDPRFSGRKFASVGTRPIRPDGVDKVTGRARYGADFNMAGQLVGRVLRSPHAHAKILKIDTSKAEKLNGVKAVITAKD LPDLTDGDAAMYDILDNCMARTKALYDGHAVAAVAAVDARTARQALKLIEVEYEILPHVTDVDEAMQHHAPLINDTIFTE GLEEKPVKPSNVTKRSQFGHGDVHQGFGHADFIVERSFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCA QLLGMEASKLRVTSSEIGGGFGGKTHVWAEPVALALSRKAGRPVKLVMTRDEVFRASGPTSATSIDVKIGARKDGTITAA EATLRYSAGPYAGSWAEIGAMTAFACYKLDNVKTVGYEVLVNRPKTAAYRAPSAPMAAFAVESAVDELAKELGMDPVDFR IKNAAQEGTRSSYGPVYGPIGIGPTLEAVKHHPHMKAPLKKNQGRGMACGFWFNFGGQTCVDLNIGMDGSVSLAVGTVDV GGSRASLSLVAAEELGIDYAQLKAVVADTSSLGYNDMTDGSRGTFSSSMATISAARNAIKILRERAAQMWDISVDDVVWE LGHAVAKGEKHGNLGKLSLKEIAAQSGKTGGPIAGHSELVADGAGVSFATHICDIEVDPETGSTRVIRYTVVQDAGKAVH PTYVEGQYQGGAAQGIGWALNEEYIYGKDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLA AIANAVSNAAGVRMTHIPMSPPRILAAIEAERGE
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To xanthine oxidases [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=748, Percent_Identity=26.4705882352941, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI71773480, Length=768, Percent_Identity=25.5208333333333, Blast_Score=166, Evalue=6e-41, Organism=Escherichia coli, GI1789230, Length=765, Percent_Identity=30.4575163398693, Blast_Score=298, Evalue=8e-82, Organism=Escherichia coli, GI1789246, Length=796, Percent_Identity=29.5226130653266, Blast_Score=262, Evalue=5e-71, Organism=Escherichia coli, GI1786478, Length=739, Percent_Identity=27.4695534506089, Blast_Score=158, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17540638, Length=782, Percent_Identity=24.0409207161125, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17539860, Length=780, Percent_Identity=23.0769230769231, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI32566215, Length=594, Percent_Identity=23.5690235690236, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI17737937, Length=737, Percent_Identity=26.3229308005427, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI24647193, Length=770, Percent_Identity=25.1948051948052, Blast_Score=131, Evalue=2e-30, Organism=Drosophila melanogaster, GI24647199, Length=700, Percent_Identity=23.4285714285714, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24647201, Length=703, Percent_Identity=23.0440967283073, Blast_Score=115, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017607 - InterPro: IPR000674 - InterPro: IPR008274 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 80347; Mature: 80347
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDPRFSGRKFASVGTRPIRPDGVDKVTGRARYGADFNMAGQLVGRVLRSPHAHAKILK CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCEEEEE IDTSKAEKLNGVKAVITAKDLPDLTDGDAAMYDILDNCMARTKALYDGHAVAAVAAVDAR EECCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH TARQALKLIEVEYEILPHVTDVDEAMQHHAPLINDTIFTEGLEEKPVKPSNVTKRSQFGH HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCC GDVHQGFGHADFIVERSFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCA CCHHCCCCCHHEEEECCCCCCCCCCCCCCCCHHEEECCCCCCEEEEEEECCCHHHHHHHH QLLGMEASKLRVTSSEIGGGFGGKTHVWAEPVALALSRKAGRPVKLVMTRDEVFRASGPT HHHCCCHHHEEEEHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCC SATSIDVKIGARKDGTITAAEATLRYSAGPYAGSWAEIGAMTAFACYKLDNVKTVGYEVL CCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCEEECEEEE VNRPKTAAYRAPSAPMAAFAVESAVDELAKELGMDPVDFRIKNAAQEGTRSSYGPVYGPI ECCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEECC GIGPTLEAVKHHPHMKAPLKKNQGRGMACGFWFNFGGQTCVDLNIGMDGSVSLAVGTVDV CCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEEEEEEC GGSRASLSLVAAEELGIDYAQLKAVVADTSSLGYNDMTDGSRGTFSSSMATISAARNAIK CCCCCEEEEEEHHHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRERAAQMWDISVDDVVWELGHAVAKGEKHGNLGKLSLKEIAAQSGKTGGPIAGHSELV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHE ADGAGVSFATHICDIEVDPETGSTRVIRYTVVQDAGKAVHPTYVEGQYQGGAAQGIGWAL ECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCEECCCCCCCCCEEE NEEYIYGKDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLA CCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH AIANAVSNAAGVRMTHIPMSPPRILAAIEAERGE HHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCC >Mature Secondary Structure MNFDPRFSGRKFASVGTRPIRPDGVDKVTGRARYGADFNMAGQLVGRVLRSPHAHAKILK CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCEEEEE IDTSKAEKLNGVKAVITAKDLPDLTDGDAAMYDILDNCMARTKALYDGHAVAAVAAVDAR EECCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH TARQALKLIEVEYEILPHVTDVDEAMQHHAPLINDTIFTEGLEEKPVKPSNVTKRSQFGH HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCC GDVHQGFGHADFIVERSFKTEQTHQGYIEPHACVASVSSDGTADLWVCTQGHFVYRQHCA CCHHCCCCCHHEEEECCCCCCCCCCCCCCCCHHEEECCCCCCEEEEEEECCCHHHHHHHH QLLGMEASKLRVTSSEIGGGFGGKTHVWAEPVALALSRKAGRPVKLVMTRDEVFRASGPT HHHCCCHHHEEEEHHHCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCC SATSIDVKIGARKDGTITAAEATLRYSAGPYAGSWAEIGAMTAFACYKLDNVKTVGYEVL CCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCEEECEEEE VNRPKTAAYRAPSAPMAAFAVESAVDELAKELGMDPVDFRIKNAAQEGTRSSYGPVYGPI ECCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEECC GIGPTLEAVKHHPHMKAPLKKNQGRGMACGFWFNFGGQTCVDLNIGMDGSVSLAVGTVDV CCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCEEEEEEEEEC GGSRASLSLVAAEELGIDYAQLKAVVADTSSLGYNDMTDGSRGTFSSSMATISAARNAIK CCCCCEEEEEEHHHHCCCHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRERAAQMWDISVDDVVWELGHAVAKGEKHGNLGKLSLKEIAAQSGKTGGPIAGHSELV HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHE ADGAGVSFATHICDIEVDPETGSTRVIRYTVVQDAGKAVHPTYVEGQYQGGAAQGIGWAL ECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCEECCEECCCCCCCCCEEE NEEYIYGKDGRLQNAGFLDYRIPVCSDLPMIDTQILEIPNPNHPYGVRGVGETSIVPPLA CCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH AIANAVSNAAGVRMTHIPMSPPRILAAIEAERGE HHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]