| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472061
Identifier: 13472061
GI number: 13472061
Start: 1801899
End: 1802165
Strand: Direct
Name: 13472061
Synonym: msr2235
Alternate gene names: NA
Gene position: 1801899-1802165 (Clockwise)
Preceding gene: 13472060
Following gene: 13472066
Centisome position: 25.61
GC content: 64.04
Gene sequence:
>267_bases ATGAGCCTGACCTTCCCCAACCGCAGCCGCAGCTATGACGAAGCCGGCAAGCGCATTCGTTTCGTCGGCCATGACGGCAT GTTCCAGATTTCCTTCTCGGTCGCCGCCGATGCCATGACCAGGATGCAGCCGGCAACCGCGGCCAACGAGGCCGGTTACC TCGCCACATTCGACACCGAGAGCAGCGCCATCCGCGACGTGGCCTCGAAGGCCTACGGCCGCACGCGCAAGAGCATGTAT GTGCTGACGGCCGACGACTTCGGCTGA
Upstream 100 bases:
>100_bases GCCTGGCCAAGGAAGAGGCAGACCGCGTCGCCGAAGCCCTGAACCCGACGCCGAAGAAGAAGCGGGCGACCAAGAAGGCC GCCGCAACGGAGGCAAAAAC
Downstream 100 bases:
>100_bases TCAGCCGAGGTCCATGTCCTCGATCATCGTCCGTATCTTCGCGGCTTTTTCGAAATGGTCGAGGCGGTGGGTCCTGATCC ACCATTCCGCTGCTTCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSLTFPNRSRSYDEAGKRIRFVGHDGMFQISFSVAADAMTRMQPATAANEAGYLATFDTESSAIRDVASKAYGRTRKSMY VLTADDFG
Sequences:
>Translated_88_residues MSLTFPNRSRSYDEAGKRIRFVGHDGMFQISFSVAADAMTRMQPATAANEAGYLATFDTESSAIRDVASKAYGRTRKSMY VLTADDFG >Mature_87_residues SLTFPNRSRSYDEAGKRIRFVGHDGMFQISFSVAADAMTRMQPATAANEAGYLATFDTESSAIRDVASKAYGRTRKSMYV LTADDFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9686; Mature: 9555
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTFPNRSRSYDEAGKRIRFVGHDGMFQISFSVAADAMTRMQPATAANEAGYLATFDTE CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCC SSAIRDVASKAYGRTRKSMYVLTADDFG HHHHHHHHHHHCCCCCCEEEEEEECCCC >Mature Secondary Structure SLTFPNRSRSYDEAGKRIRFVGHDGMFQISFSVAADAMTRMQPATAANEAGYLATFDTE CCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCC SSAIRDVASKAYGRTRKSMYVLTADDFG HHHHHHHHHHHCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA