Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472026

Identifier: 13472026

GI number: 13472026

Start: 1771737

End: 1773263

Strand: Direct

Name: 13472026

Synonym: mlr2187

Alternate gene names: NA

Gene position: 1771737-1773263 (Clockwise)

Preceding gene: 13472024

Following gene: 13472028

Centisome position: 25.18

GC content: 62.08

Gene sequence:

>1527_bases
ATGAAAACACTATCTCTGACGTTGGCTGCGGGCACGCTGACGGCGGCATTGGCTGGCGCGCTTTCCAGCGCCATCGCCGC
ACCCTACAAGCACGTCCTGCTCATCAGCGTCGACGGGCTTCATGCGCTCGATCTGGCAAACTATGTCGCCGCAAATCCGA
AAAGCTCGCTCGCCGCGCTCGCCGATACCGGGATTTTCTATCCGAATGCGCTCGCCAGCGCCCCGTCCGACTCGTTTCCT
GGCCTTGTGGCACAGGTCACCGGCGGCACACCCAAATCGACGGGCGTATTCTACGACGACAGCTACGACCGCACTTATTT
CGCGCCGGCCTCGGATTGCAAGGGCGAGCCGGGCGCCGAGGTGGCTTTCGCCGAGAACATCGACGTCGATTCGACGCGCC
TTGATGGTGGCGGCAAGCCAGGCGATTACCGCAGCCAGATCGACCCGGCAAAGCTGCCGATGACGCTGATCAACGGCAAA
TGCTCGGTGGTCTATCCGCATGATTTCGTGCGGGTCAACAACGTCTTCGAAATCGTGAAAGCGCATGGCGGCCGCACGGC
CTGGTCCGACAAGCACCCGGCCTATGAATGGCTGAACGGACCTTCGGGCAAAGGCGTCGACGACCTCTACGCATTGGAAC
AGGACAGCTTGATTCCCGGCACCAAGGTCAAGACGACGGGCAGCTTCAAGGCCGAGCGCGACTTCGATGAAGCGCGGGTC
CAGGCGGTGATCAACGAGATCAAAGGCCTCGACAGCACCGGCTCGCATCCCGCCGCGGTTCCCACGCTTTTCGGCATGAA
TTTCCAGGCGGTGAGCGTGGGCCAGAAGCTTCCTAAGGCCGGTCCTGGCGATGAGGCTGGTCTGGTGGGCGGTTATCTGG
ATGCCAGCGGCACGCCTGGCAACGGTCTCGCCGGGCAGCTCGCCTATGTAGATGGCGCTGTCGGCGAACTGATGGCCGCA
CTCAAGGACAACAAACTCGCCAATTCGACCCTGATCATACTTGCCTCGAAGCATGGCCAGTCGCCCATCGACCCGGCGTC
GTTCCAGCCACTGGACGACGATCCCTATACGAAGACACCGGGCTATGCCTTCCACATCGCCGACGACGCCGCGCTGATCT
GGCTCAAACCGCAAGACAGGGTCAGAAACCTCGCGGCCGCGCAGGATTATCTCGAGAAATCGAGCAAGGCTGAAGGCATC
GCCCAGATCCAGCCGCCGAATGCCCTTGCTCTCGCTTATCAGGATCCGGCCACCGACAGCCGTACGCCGGACTTCATAGC
CACGGTCAATCCGGGCGTGGTCTACACATCCGGCTCGAAGATTGCCGAGCACGGTGGCGCCAATGTGAACGATCGCAACG
TGGCGCTTCTCATCAGCGGTCCTTCGCTCAAGCCGAGGTCGGTGCCAGCTCTGGTGCAGACGACGCAGGTAGCTCCCACG
ATCCTGCGGGCTCTTGGCTATGACGCGAACGAACTCCAGGCTGTGAAGCTCGAAGGCACCCAGGAGCTGCCGGCGGCACC
GTTCTAG

Upstream 100 bases:

>100_bases
TACCAATCCGTAAGGTCCTTTGCCGACGAGTTTCACGAACCTGTCATGTCCACTCGCCTATCCTTGATCCATCGCGGGCT
GCGAGACGAGGGACACTCCT

Downstream 100 bases:

>100_bases
GCGTTCAGCTCCGCAGCAACAGCCTGACGGATTGGCTGACAGAATGCGCGATTTCGACCTCGCGGCGCTGACGCTTGCGT
ATTTGCGCCCGTTTGTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP
GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK
CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV
QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA
LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI
AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT
ILRALGYDANELQAVKLEGTQELPAAPF

Sequences:

>Translated_508_residues
MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP
GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK
CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV
QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA
LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI
AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT
ILRALGYDANELQAVKLEGTQELPAAPF
>Mature_508_residues
MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAALADTGIFYPNALASAPSDSFP
GLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAEVAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGK
CSVVYPHDFVRVNNVFEIVKAHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV
QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPGNGLAGQLAYVDGAVGELMAA
LKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTPGYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGI
AQIQPPNALALAYQDPATDSRTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT
ILRALGYDANELQAVKLEGTQELPAAPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53041; Mature: 53041

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAAL
CCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH
ADTGIFYPNALASAPSDSFPGLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAE
HHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCE
VAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGKCSVVYPHDFVRVNNVFEIVK
EEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEECCEEEEECCHHHEEHHHHHHHHH
AHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV
HCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHH
QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPG
HHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCC
NGLAGQLAYVDGAVGELMAALKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTP
CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
GYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGIAQIQPPNALALAYQDPATDS
CEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCC
RTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT
CCCCEEEECCCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILRALGYDANELQAVKLEGTQELPAAPF
HHHHHCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKTLSLTLAAGTLTAALAGALSSAIAAPYKHVLLISVDGLHALDLANYVAANPKSSLAAL
CCEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHH
ADTGIFYPNALASAPSDSFPGLVAQVTGGTPKSTGVFYDDSYDRTYFAPASDCKGEPGAE
HHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCE
VAFAENIDVDSTRLDGGGKPGDYRSQIDPAKLPMTLINGKCSVVYPHDFVRVNNVFEIVK
EEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCEEEECCEEEEECCHHHEEHHHHHHHHH
AHGGRTAWSDKHPAYEWLNGPSGKGVDDLYALEQDSLIPGTKVKTTGSFKAERDFDEARV
HCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHH
QAVINEIKGLDSTGSHPAAVPTLFGMNFQAVSVGQKLPKAGPGDEAGLVGGYLDASGTPG
HHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCC
NGLAGQLAYVDGAVGELMAALKDNKLANSTLIILASKHGQSPIDPASFQPLDDDPYTKTP
CCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
GYAFHIADDAALIWLKPQDRVRNLAAAQDYLEKSSKAEGIAQIQPPNALALAYQDPATDS
CEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCC
RTPDFIATVNPGVVYTSGSKIAEHGGANVNDRNVALLISGPSLKPRSVPALVQTTQVAPT
CCCCEEEECCCCEEEECCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILRALGYDANELQAVKLEGTQELPAAPF
HHHHHCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA