| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471970
Identifier: 13471970
GI number: 13471970
Start: 1726670
End: 1727413
Strand: Direct
Name: 13471970
Synonym: mlr2113
Alternate gene names: NA
Gene position: 1726670-1727413 (Clockwise)
Preceding gene: 13471969
Following gene: 13471971
Centisome position: 24.54
GC content: 65.46
Gene sequence:
>744_bases GTGCCAATTCGCAAGAATCTTGCCGCGAATCTGCGACGGCTGGTCAGCGGCCATGCGTCGGTGGCAGCGGTATGCCGCGG ATTGAACATGAACCGCACCCAGTTCGAGCGCTATCTGCAAGGCAAGAGCGTGCCCAACCGGGCCACCGCCAGGCTGATCT GCACCTATTTCCGCATCGACGAGGATGATTTGTACCGCGCGCCGGAAGTCCCCGCGCCCGAACACAAGGCCCTGTTGCCG ATCCACCAGACGCTCTACGAGAACATGGTGCGCGGCCCGGCTCCCGCGGTCGCCGGCGGCACCTATTTCACCTACTTCAC GGTTCCCGACCGTCCCGACCTGCTGGTGCGGTCAGTTACCTTCGTGCGGCGCGAGGCCGAGCTGGTGACCTTCAGGCGCG TCACACGCTGGGCCGAGGGCCATCGCCAGGGCGGAGCGCGGGTGCTCGGCTGGCATTATGGCGTGGCGATCTCACGCCTG AACTGGATCTATTTCGCCGGCATCAACCGCCGCCAGACCAGGGAGCCGTCGGTGATGACCGTGCAATGGGCACCCTTCTC GGACCCGGTTCTGGTCGGCAAAGCCTTCGTCCTGACCGGTTCGGGACCGGCCTGCGTGTCGGTCATCATGCGCCAGGAAG TCGGCAGGATCAGCCTCAGGCAGGTGCTGGGGATGTGCCGACCCGTCAGCCTAGATGACCCGCGCCTCGACCAGCTTGTG GCCAGCCTTGTGCGCGAAGGCTAG
Upstream 100 bases:
>100_bases GCCGAAGGTCCCATTCGCGGCGCCGCGATGTTGTGCGAGATTGGCGCAATATAAGCGACTACTTGAATAATGGTTCGAAC GGCTGTCGAGGGGCGGTGTC
Downstream 100 bases:
>100_bases AGTGCCGTCCCGAACCAACAGACATTGGCCCGGGCTAACAGGGATCCGCGATGCTCAACAGCTTCGACTATGGCGGCAAG GAAGCCGATACCGTGCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPIRKNLAANLRRLVSGHASVAAVCRGLNMNRTQFERYLQGKSVPNRATARLICTYFRIDEDDLYRAPEVPAPEHKALLP IHQTLYENMVRGPAPAVAGGTYFTYFTVPDRPDLLVRSVTFVRREAELVTFRRVTRWAEGHRQGGARVLGWHYGVAISRL NWIYFAGINRRQTREPSVMTVQWAPFSDPVLVGKAFVLTGSGPACVSVIMRQEVGRISLRQVLGMCRPVSLDDPRLDQLV ASLVREG
Sequences:
>Translated_247_residues MPIRKNLAANLRRLVSGHASVAAVCRGLNMNRTQFERYLQGKSVPNRATARLICTYFRIDEDDLYRAPEVPAPEHKALLP IHQTLYENMVRGPAPAVAGGTYFTYFTVPDRPDLLVRSVTFVRREAELVTFRRVTRWAEGHRQGGARVLGWHYGVAISRL NWIYFAGINRRQTREPSVMTVQWAPFSDPVLVGKAFVLTGSGPACVSVIMRQEVGRISLRQVLGMCRPVSLDDPRLDQLV ASLVREG >Mature_246_residues PIRKNLAANLRRLVSGHASVAAVCRGLNMNRTQFERYLQGKSVPNRATARLICTYFRIDEDDLYRAPEVPAPEHKALLPI HQTLYENMVRGPAPAVAGGTYFTYFTVPDRPDLLVRSVTFVRREAELVTFRRVTRWAEGHRQGGARVLGWHYGVAISRLN WIYFAGINRRQTREPSVMTVQWAPFSDPVLVGKAFVLTGSGPACVSVIMRQEVGRISLRQVLGMCRPVSLDDPRLDQLVA SLVREG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27801; Mature: 27669
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRKNLAANLRRLVSGHASVAAVCRGLNMNRTQFERYLQGKSVPNRATARLICTYFRID CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEC EDDLYRAPEVPAPEHKALLPIHQTLYENMVRGPAPAVAGGTYFTYFTVPDRPDLLVRSVT HHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH FVRREAELVTFRRVTRWAEGHRQGGARVLGWHYGVAISRLNWIYFAGINRRQTREPSVMT HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCEEEEECCCCCCCCCCCEEE VQWAPFSDPVLVGKAFVLTGSGPACVSVIMRQEVGRISLRQVLGMCRPVSLDDPRLDQLV EEECCCCCCEEECEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHH ASLVREG HHHHHCC >Mature Secondary Structure PIRKNLAANLRRLVSGHASVAAVCRGLNMNRTQFERYLQGKSVPNRATARLICTYFRID CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEC EDDLYRAPEVPAPEHKALLPIHQTLYENMVRGPAPAVAGGTYFTYFTVPDRPDLLVRSVT HHHHCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH FVRREAELVTFRRVTRWAEGHRQGGARVLGWHYGVAISRLNWIYFAGINRRQTREPSVMT HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCEEEEECCCCCCCCCCCEEE VQWAPFSDPVLVGKAFVLTGSGPACVSVIMRQEVGRISLRQVLGMCRPVSLDDPRLDQLV EEECCCCCCEEECEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHH ASLVREG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA