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The map label for this gene is yagR [H]

Identifier: 13471827

GI number: 13471827

Start: 1583036

End: 1585348

Strand: Direct

Name: yagR [H]

Synonym: mlr1927

Alternate gene names: 13471827

Gene position: 1583036-1585348 (Clockwise)

Preceding gene: 13471826

Following gene: 13471829

Centisome position: 22.5

GC content: 67.01

Gene sequence:

>2313_bases
ATGACCGTTCACAACATCAGAGTTGGTGAATCGAGACGGGGCGACGCCTCCGACGGCGCACTGGCGGAAGCCGTTGGCGG
CCGGCTGTCGCGCGTCGACGGCCCGGCCAAGATCACCGGTGCCGCCAAATACGCCGTCGAGCAGCAGCTCGAGCACCTCG
CCTATGCCGTGCTGGTCGAAAGCACGATTGCCTCGGGCAAGGTGCGCGCGATCGACACTGCGCAGGCTGAGGCGGCGCCG
GCTGTGCTGCAAGTGCTGACGCCGGACACCATCATCAGCCTGAGGACCGCATCCGACTGGTTCGGCACGCCGCCACCGGA
CAAACCCTACTGCCCGCTGGCGCGCGACATCACCTTCTCCGGCCAGCATATCGCGGCAGTTGTCGCCGAAACCTTCGAGC
AGGCGGTCGCCGCGGCGGCCCTCGTCAAGGTCAGCTATGACGAGACGCCTTCCATCGTCGATCTCAGCGACGGCAAGGCC
GGCGACGGCATTCCGATCGATGCCATGACCAAGGAATGGGGCGATGCGCCCGCAGCCTTCGCCGCCGCGCCGGTGCGCAT
CTGCGCCGCCTACAACACGCCGCGCGAATACCAGGCGCCGATGGAGCCGCATGGCCTGATCGCGCGCTGGGAGGGCGATC
ATCTGACCGTCTGGGAGCCGAGCCAGTGGTTGGACGGCATGGCCCGCACCTACGCCGAATGGTTCGAAGTGCCGTTCGAG
AATGTGCGGCTGGTCTCGCCCTATATTGGCGGTGGCTTCGGCTCCAAGGCGCTGGCGCTGAGCCATGGCGCGGTGGCGGC
AAGTGCCGCCAAAATGCTGGGACGGCCGGTGAAGCTGGTGATGACGCGGCCGCAGACCTTTACCGGCTATGGCGGCCGCG
CCGCGACGCGCCAGACGGTGACGATCGGCGCCAACCACGACGGCATGATCCAGTCGATCGTGCATCGCGGCGTCAACGAA
ACCTCCATCGACGGCATGTGGGTCGAGCCGCTCGGCTCGGTCACCTCGATCATGTACGCGACGCCGAATTTCTCCTCGAA
GCAGAATGTCGTGCGGGTCAATTCCGTGGTGCCGGGCGCCATGCGGGCGCCGGGCGAAAATCCGTCGGCCTTCGGCATCG
AAAGCGCCATCGACGAGCTCGCCTATGAGGTCGGCATCGACCCACTGGAGATTCGGCTCAGAAACTATGCCGAGCAGGAT
CCGCACGCCAGAAAAGCCTGGTCGACCAGGCAGTTGCGAGAGGCTTTTGCCGCGGGCGCCGAGCGCTTCGGCTGGTCCAG
GCGCTCGTCGAAACCGCGCTCGATGCGCGACGGCAACCAGCTGATCGGCTGGGGCGTCGCCGCCGGCACCTATCCGGTGC
GGCGCGCCTACGGCGAGGCTCTCGTGCGCATCCTGGCCGACGGCTCGGTCGAGGTCGAAAGCTCCTCGATCGACATGGGC
CAGGGCACCTACACCATCCTGGCGCAGACCGCCGCCGAGACGGTCGGCGTGCCGGCCGACGATGTTGTGGTGAAGCTCGG
CGACTCCCGCTTTGCCCGCGCCGGCGTCAGCGGCGGCTCGCGGCTGGCTGGCGTGATGACGGGGGCGGTCCACAAGGCCG
CGACCTCGGCGCTCGATCAAATGGTGGGCCTGGCGATCAGCGATCCGCGCTCGCCCTTCCACGCGCTGCAGGCCAACACT
CTGGTCGTCGCCAATGGCCGCATCGGCTCGCCGCGCGGCGACGGCCCCGATGTCTCGATCGCCGAACTGCTCAAGAGCGT
CGGCCGCGACCGCATCGAGGCGACCGGCGACACCATGCCGGCCAACTCGACGGCGGAAGACCGCTACAAGAACTACACCA
CCATCGCCATGGCGCTGCCGCACACCGAGGGCGATTATTCCCGCTACTCCTGGTGCGCGCATTTCATCGAGGTGCGCGTC
GACGAGGATTTCGGCACGGTGCGCGTGTCGCGCGTGGTGTCGGCGCTGGATTCCGGCCGGCTCTACAACCCGAAGCTCGC
CGAAAGCCAATGGAAGGGCGGCATCATCATGGGCATCGGCCAGGCGTTGCTGGAAGAAGGCATCATGGATCGTCGCCATG
GCCGCATCGTCAACAACAACCTCGCCGATTACCTGGTGCCGACCAATGCCGACATCCCGGACATCGAGGTGATCTCGGTC
GGCATTCCCGACCCGCACTCCTCGGCGCTCGGCGGCAAGGGTGTGGGTGAGCTTGGCATCGTCGGTGTCGCGCCCGCGAT
CGCCAATGCGGTGTTCCACGCGACGGGAAAGAGGGTGCGGGATTTGCCGATCACGCTGGAGAAGCTGATCTGA

Upstream 100 bases:

>100_bases
TCGCCGTCGAAGGCGCCGTCGACCAAGGCGCCAACCATTACAAGATCGAACTCGCGCCGCGCGTTGTCGCGCGCGCCATC
CTCAAATTGGGAGAGACGGC

Downstream 100 bases:

>100_bases
GGGTGGAGCGCGTAATCTCCCTTTGCGCTGGAGATTACGCGACCGGTCGCGTTCGCCCCTACCACTCCAACCCGAATACC
AGCTTGCCGAAATGCAGGCC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 769

Protein sequence:

>770_residues
MTVHNIRVGESRRGDASDGALAEAVGGRLSRVDGPAKITGAAKYAVEQQLEHLAYAVLVESTIASGKVRAIDTAQAEAAP
AVLQVLTPDTIISLRTASDWFGTPPPDKPYCPLARDITFSGQHIAAVVAETFEQAVAAAALVKVSYDETPSIVDLSDGKA
GDGIPIDAMTKEWGDAPAAFAAAPVRICAAYNTPREYQAPMEPHGLIARWEGDHLTVWEPSQWLDGMARTYAEWFEVPFE
NVRLVSPYIGGGFGSKALALSHGAVAASAAKMLGRPVKLVMTRPQTFTGYGGRAATRQTVTIGANHDGMIQSIVHRGVNE
TSIDGMWVEPLGSVTSIMYATPNFSSKQNVVRVNSVVPGAMRAPGENPSAFGIESAIDELAYEVGIDPLEIRLRNYAEQD
PHARKAWSTRQLREAFAAGAERFGWSRRSSKPRSMRDGNQLIGWGVAAGTYPVRRAYGEALVRILADGSVEVESSSIDMG
QGTYTILAQTAAETVGVPADDVVVKLGDSRFARAGVSGGSRLAGVMTGAVHKAATSALDQMVGLAISDPRSPFHALQANT
LVVANGRIGSPRGDGPDVSIAELLKSVGRDRIEATGDTMPANSTAEDRYKNYTTIAMALPHTEGDYSRYSWCAHFIEVRV
DEDFGTVRVSRVVSALDSGRLYNPKLAESQWKGGIIMGIGQALLEEGIMDRRHGRIVNNNLADYLVPTNADIPDIEVISV
GIPDPHSSALGGKGVGELGIVGVAPAIANAVFHATGKRVRDLPITLEKLI

Sequences:

>Translated_770_residues
MTVHNIRVGESRRGDASDGALAEAVGGRLSRVDGPAKITGAAKYAVEQQLEHLAYAVLVESTIASGKVRAIDTAQAEAAP
AVLQVLTPDTIISLRTASDWFGTPPPDKPYCPLARDITFSGQHIAAVVAETFEQAVAAAALVKVSYDETPSIVDLSDGKA
GDGIPIDAMTKEWGDAPAAFAAAPVRICAAYNTPREYQAPMEPHGLIARWEGDHLTVWEPSQWLDGMARTYAEWFEVPFE
NVRLVSPYIGGGFGSKALALSHGAVAASAAKMLGRPVKLVMTRPQTFTGYGGRAATRQTVTIGANHDGMIQSIVHRGVNE
TSIDGMWVEPLGSVTSIMYATPNFSSKQNVVRVNSVVPGAMRAPGENPSAFGIESAIDELAYEVGIDPLEIRLRNYAEQD
PHARKAWSTRQLREAFAAGAERFGWSRRSSKPRSMRDGNQLIGWGVAAGTYPVRRAYGEALVRILADGSVEVESSSIDMG
QGTYTILAQTAAETVGVPADDVVVKLGDSRFARAGVSGGSRLAGVMTGAVHKAATSALDQMVGLAISDPRSPFHALQANT
LVVANGRIGSPRGDGPDVSIAELLKSVGRDRIEATGDTMPANSTAEDRYKNYTTIAMALPHTEGDYSRYSWCAHFIEVRV
DEDFGTVRVSRVVSALDSGRLYNPKLAESQWKGGIIMGIGQALLEEGIMDRRHGRIVNNNLADYLVPTNADIPDIEVISV
GIPDPHSSALGGKGVGELGIVGVAPAIANAVFHATGKRVRDLPITLEKLI
>Mature_769_residues
TVHNIRVGESRRGDASDGALAEAVGGRLSRVDGPAKITGAAKYAVEQQLEHLAYAVLVESTIASGKVRAIDTAQAEAAPA
VLQVLTPDTIISLRTASDWFGTPPPDKPYCPLARDITFSGQHIAAVVAETFEQAVAAAALVKVSYDETPSIVDLSDGKAG
DGIPIDAMTKEWGDAPAAFAAAPVRICAAYNTPREYQAPMEPHGLIARWEGDHLTVWEPSQWLDGMARTYAEWFEVPFEN
VRLVSPYIGGGFGSKALALSHGAVAASAAKMLGRPVKLVMTRPQTFTGYGGRAATRQTVTIGANHDGMIQSIVHRGVNET
SIDGMWVEPLGSVTSIMYATPNFSSKQNVVRVNSVVPGAMRAPGENPSAFGIESAIDELAYEVGIDPLEIRLRNYAEQDP
HARKAWSTRQLREAFAAGAERFGWSRRSSKPRSMRDGNQLIGWGVAAGTYPVRRAYGEALVRILADGSVEVESSSIDMGQ
GTYTILAQTAAETVGVPADDVVVKLGDSRFARAGVSGGSRLAGVMTGAVHKAATSALDQMVGLAISDPRSPFHALQANTL
VVANGRIGSPRGDGPDVSIAELLKSVGRDRIEATGDTMPANSTAEDRYKNYTTIAMALPHTEGDYSRYSWCAHFIEVRVD
EDFGTVRVSRVVSALDSGRLYNPKLAESQWKGGIIMGIGQALLEEGIMDRRHGRIVNNNLADYLVPTNADIPDIEVISVG
IPDPHSSALGGKGVGELGIVGVAPAIANAVFHATGKRVRDLPITLEKLI

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=779, Percent_Identity=24.6469833119384, Blast_Score=130, Evalue=7e-30,
Organism=Homo sapiens, GI91823271, Length=746, Percent_Identity=22.3860589812332, Blast_Score=101, Evalue=2e-21,
Organism=Escherichia coli, GI1786478, Length=758, Percent_Identity=39.8416886543536, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1789230, Length=774, Percent_Identity=30.8785529715762, Blast_Score=258, Evalue=7e-70,
Organism=Escherichia coli, GI1789246, Length=833, Percent_Identity=26.4105642256903, Blast_Score=182, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI32566215, Length=574, Percent_Identity=23.5191637630662, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24647199, Length=740, Percent_Identity=25, Blast_Score=143, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24647193, Length=753, Percent_Identity=24.4355909694555, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24647201, Length=747, Percent_Identity=24.3641231593039, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24647195, Length=635, Percent_Identity=24.7244094488189, Blast_Score=122, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24647197, Length=679, Percent_Identity=24.7422680412371, Blast_Score=122, Evalue=7e-28,
Organism=Drosophila melanogaster, GI17737937, Length=747, Percent_Identity=23.2931726907631, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 81907; Mature: 81776

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVHNIRVGESRRGDASDGALAEAVGGRLSRVDGPAKITGAAKYAVEQQLEHLAYAVLVE
CCEEEEECCCCCCCCCCCCHHHHHHCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHH
STIASGKVRAIDTAQAEAAPAVLQVLTPDTIISLRTASDWFGTPPPDKPYCPLARDITFS
HHHCCCCEEEEECHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEC
GQHIAAVVAETFEQAVAAAALVKVSYDETPSIVDLSDGKAGDGIPIDAMTKEWGDAPAAF
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCHHH
AAAPVRICAAYNTPREYQAPMEPHGLIARWEGDHLTVWEPSQWLDGMARTYAEWFEVPFE
HHHHEEEEEECCCCHHCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCC
NVRLVSPYIGGGFGSKALALSHGAVAASAAKMLGRPVKLVMTRPQTFTGYGGRAATRQTV
CEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEECCCCCCCCCCEEE
TIGANHDGMIQSIVHRGVNETSIDGMWVEPLGSVTSIMYATPNFSSKQNVVRVNSVVPGA
EEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHEEEEECCCCCCCCCEEEEECCCCCH
MRAPGENPSAFGIESAIDELAYEVGIDPLEIRLRNYAEQDPHARKAWSTRQLREAFAAGA
HCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ERFGWSRRSSKPRSMRDGNQLIGWGVAAGTYPVRRAYGEALVRILADGSVEVESSSIDMG
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
QGTYTILAQTAAETVGVPADDVVVKLGDSRFARAGVSGGSRLAGVMTGAVHKAATSALDQ
CCCEEEEEHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MVGLAISDPRSPFHALQANTLVVANGRIGSPRGDGPDVSIAELLKSVGRDRIEATGDTMP
HHCEEECCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCC
ANSTAEDRYKNYTTIAMALPHTEGDYSRYSWCAHFIEVRVDEDFGTVRVSRVVSALDSGR
CCCCHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCC
LYNPKLAESQWKGGIIMGIGQALLEEGIMDRRHGRIVNNNLADYLVPTNADIPDIEVISV
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEEEEE
GIPDPHSSALGGKGVGELGIVGVAPAIANAVFHATGKRVRDLPITLEKLI
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHCCCCCCHHHCC
>Mature Secondary Structure 
TVHNIRVGESRRGDASDGALAEAVGGRLSRVDGPAKITGAAKYAVEQQLEHLAYAVLVE
CEEEEECCCCCCCCCCCCHHHHHHCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHH
STIASGKVRAIDTAQAEAAPAVLQVLTPDTIISLRTASDWFGTPPPDKPYCPLARDITFS
HHHCCCCEEEEECHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEC
GQHIAAVVAETFEQAVAAAALVKVSYDETPSIVDLSDGKAGDGIPIDAMTKEWGDAPAAF
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCHHH
AAAPVRICAAYNTPREYQAPMEPHGLIARWEGDHLTVWEPSQWLDGMARTYAEWFEVPFE
HHHHEEEEEECCCCHHCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCC
NVRLVSPYIGGGFGSKALALSHGAVAASAAKMLGRPVKLVMTRPQTFTGYGGRAATRQTV
CEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCEECCCCCCCCCCEEE
TIGANHDGMIQSIVHRGVNETSIDGMWVEPLGSVTSIMYATPNFSSKQNVVRVNSVVPGA
EEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHEEEEECCCCCCCCCEEEEECCCCCH
MRAPGENPSAFGIESAIDELAYEVGIDPLEIRLRNYAEQDPHARKAWSTRQLREAFAAGA
HCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ERFGWSRRSSKPRSMRDGNQLIGWGVAAGTYPVRRAYGEALVRILADGSVEVESSSIDMG
HHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
QGTYTILAQTAAETVGVPADDVVVKLGDSRFARAGVSGGSRLAGVMTGAVHKAATSALDQ
CCCEEEEEHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MVGLAISDPRSPFHALQANTLVVANGRIGSPRGDGPDVSIAELLKSVGRDRIEATGDTMP
HHCEEECCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCC
ANSTAEDRYKNYTTIAMALPHTEGDYSRYSWCAHFIEVRVDEDFGTVRVSRVVSALDSGR
CCCCHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCC
LYNPKLAESQWKGGIIMGIGQALLEEGIMDRRHGRIVNNNLADYLVPTNADIPDIEVISV
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEEEEE
GIPDPHSSALGGKGVGELGIVGVAPAIANAVFHATGKRVRDLPITLEKLI
CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]