| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471814
Identifier: 13471814
GI number: 13471814
Start: 1571827
End: 1572099
Strand: Direct
Name: 13471814
Synonym: msr1912
Alternate gene names: NA
Gene position: 1571827-1572099 (Clockwise)
Preceding gene: 13471813
Following gene: 13471815
Centisome position: 22.34
GC content: 65.57
Gene sequence:
>273_bases ATGAGCGATACCCACATAAGCACCGCCAGCGCGACCCGTGAAAGCACCACCACCCTTGGCGTCGCCGACTGGCTCTGCCT CGCCGCGGCGCCCACCTTTGCCCTGATGGCCCTGCTTTCCTGCCTTCAAGGCGGCGACGCGGCCATGTTGTGCATGGGCG CCTCCCCGCTCACCGGCCCGTCTTTAACCGGGATGCCGGCCATGTATCTCTTGATGAGCGCCTTCCACCTGGCACCCTGG CTGCGGGTGATTTCCGGCCGTCACATCCGATAG
Upstream 100 bases:
>100_bases GTAAGCAGGGACTGGACAGGAAAGCGCTCCTCTCCCTCGCTCTTGGCGAGGGAGAGGAGCCCAAATCCTGAAGGACCGCG ACCATCAAGGAATTAAGATC
Downstream 100 bases:
>100_bases CGCCGGCGCGCCTGCATCAAACATCCCACATTTCGGAGAAGACAATGAGGCTGGTCAGGCTGAGAGCGCCGGGTGGCTTG GACAGGCTCGACCTGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSDTHISTASATRESTTTLGVADWLCLAAAPTFALMALLSCLQGGDAAMLCMGASPLTGPSLTGMPAMYLLMSAFHLAPW LRVISGRHIR
Sequences:
>Translated_90_residues MSDTHISTASATRESTTTLGVADWLCLAAAPTFALMALLSCLQGGDAAMLCMGASPLTGPSLTGMPAMYLLMSAFHLAPW LRVISGRHIR >Mature_89_residues SDTHISTASATRESTTTLGVADWLCLAAAPTFALMALLSCLQGGDAAMLCMGASPLTGPSLTGMPAMYLLMSAFHLAPWL RVISGRHIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9410; Mature: 9279
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTHISTASATRESTTTLGVADWLCLAAAPTFALMALLSCLQGGDAAMLCMGASPLTGP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC SLTGMPAMYLLMSAFHLAPWLRVISGRHIR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDTHISTASATRESTTTLGVADWLCLAAAPTFALMALLSCLQGGDAAMLCMGASPLTGP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC SLTGMPAMYLLMSAFHLAPWLRVISGRHIR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA