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The map label for this gene is ybeQ [H]

Identifier: 13471735

GI number: 13471735

Start: 1491402

End: 1493552

Strand: Direct

Name: ybeQ [H]

Synonym: mlr1804

Alternate gene names: 13471735

Gene position: 1491402-1493552 (Clockwise)

Preceding gene: 13471733

Following gene: 13471737

Centisome position: 21.2

GC content: 61.79

Gene sequence:

>2151_bases
ATGTTGCGAAGGAGCTTTTCCAGCTATTTGAGGCAAGGCCTCCTGCTCGCGTTCCTGGCGGCGTTCAGCGCACTTTGGCT
CGCCCAGGCCCACGCCGAGCGGCGCGCTGCCATTGTCGTCGGCAACAGCGAATATCCGTTTGCCCCGCTGACCAATCCCC
GCAACGACGCCAAGCTCATCGCCAATACCTTGACCGAGCTCAAATTCGACGTCCTGCTCTTTTACGATGTCAAGAAATCG
GCGGAGAAAGACCTGAACGACGCGATACGCGCGCATCTCATAGGCGCCGACATGGCGGTCTTCTATTACGCCGGCCATGC
CCTGCAGTATAACGGCCAGAACCTGCTGCTCCCCGTGGATACGCGGATCTCGTCGGCCAAGGAGGTCGCGGCCGACGCCA
TGAGGCTCAACGACCTGATCGATATCGTGAAGAACGATCCGGTCGGCGTGAAAGTCTTCATCCTCGATGCCTGCCGCAAC
AATCCGGTGGCCAAGGAGAAGGGGTTGCAGCAAGGCCTCGCCTACACAGAGGCCGGCAGCGGCCAGGTGCTGGTCGCCTT
TGCCACCAGCGCCGGTGAGGTCGCCTATGACGGGACGGGCATCAACAGCCCCTATTCGTCGGCGCTCGCCAACGCCCTGC
TCATGCCGAATCTCGATGTGTACGACACGTTCCGCACGGTGCGGGGCGACGTTCGCCAGGCGACAGGCGGCTCCCAAATT
CCCTGGATCACCGGCTCGATCGAAACGAAATTCGTCTTCCGGCAGGGTGACGCCGGCAAGCAGGTTGCGCAAGCCGAGCA
CGCCGCCGAGGCGGACGGCGGCCTGACCATCGATGAGGTGTTATGGTCCTTCATCAGCGACAGCCAGAATCCGGAGGACT
TCGAGCGCTTCGTGAAGGTCTTTCCGAACAGCCGCTACGCGGCCGAGGCGACGGAGAAGAGCCGCTTCAAGGTGGCTGCG
TTGACCAAGCGCGGACTCTATGTCAACGGCAATTTGGTCTCCAGCTCGATCGCGGCCACGGCGCCGATCGGGGCGAGTGA
CAAGGCGTTGAGCGAGGAGTTCGTGTTCCAGCAGGCCGGCGAGCGCGCCGTCAGCGAGACCTTTCGTATTTGGCCGAGCA
ACTTGCCCGACACACAGCGCGGCATGCGGACGATGGTCACGGATTGCGATCTCTACGCCGCCGATCCCAACGATCCACAG
CGCGCGGTGCCTGGTGTCACCAACGGGCTCGTCAACGTTCGGGACGCGTTGCGCGCTTGCGCTTTTGCACTGGCGGCCGA
CATCAACAACCCGCGCCTGCAGTTCCAGTTCGGCCGTGTTCTGGAAATTGCCAGGCGCTATAGCTGGGCCGAGCATTTCT
ACGAATTGGCCGGCAATCAGCAATACAGCGCCGCGCTCATCAACATGGGCTACATGGCGCGCGTCGGCATGGGGCGCGAG
ATCGACTACGGCCGCGCGTTCGACCCTTACGTTCGGGCCGCCGCGCTTGGCAATCTCAGAGCCAGGACCGACATCGGCTC
CGCCTATATTGCTGGCCAAGGCGTACCAAAGCTGCCGGAGGAAGGCGTTCTTTGGTATCGCCTGGCCGCATCAAGCGGCT
GGGCGAATGCGATCACCGCCCTCGGCGACGCGTACCGCCTCGGCACTGGCGTCAAGCAAGACTACGTCCAGGCAGCCTCC
TTGTATTCAGCAGCAGCCGATACCGGCCAGATCGATGCGATGGCAAATCTGGGACAGGCTTACCTCGCGGGCGAAGGCGT
GAAAAAGGACGTACCCCGAGGACTCGAACTGCTGCAGCGCGCAAACGACATGGGCAACAGGTATGCACCCTATTTTATGG
CACAGCTATATCTGAAAGGCGACCGCAAGCTGCCTGCCGATCCTCGCCGCGCCCTGGCCCTCCTTGAGCTTTCCGCGAAC
CGGGGAAATGAGTACGCCTACGTCCGTCTCGCCTGGGGGCATCGCGACGGTGTATTCACCGGCGGCAAGCCTGACCTGCG
ACGAGCTTACTTCGACGCCTCGCTCGCCGCGAGGCTTCGGGCCGATCAGGGAGAACAGGCGAAGGCAGAGATAGCCAAGA
AAATAGACCCCGCAACCCGAAAAGAAATAGACGGAGAAGTTGAACTATACATCAAACAAAATGGTCCGTAA

Upstream 100 bases:

>100_bases
CTGACGCCGACGATGCGCAGCGCCTGCGGCCGTTGGAATTTTGCCGTTGCTTGGGTTATGATCAGCCGGATGCTTCCCTC
TGGAAAATGGCGGTGAAGGC

Downstream 100 bases:

>100_bases
CGCGTGATAGGCGTTGCGCGATATTCGAAACGATTACCGCTCCGCTAATTGGTGCCGAACAGGGCGATGGATCAATAGTG
AGAATCGCCGTGCTTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MLRRSFSSYLRQGLLLAFLAAFSALWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLIANTLTELKFDVLLFYDVKKS
AEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVDTRISSAKEVAADAMRLNDLIDIVKNDPVGVKVFILDACRN
NPVAKEKGLQQGLAYTEAGSGQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATGGSQI
PWITGSIETKFVFRQGDAGKQVAQAEHAAEADGGLTIDEVLWSFISDSQNPEDFERFVKVFPNSRYAAEATEKSRFKVAA
LTKRGLYVNGNLVSSSIAATAPIGASDKALSEEFVFQQAGERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQ
RAVPGVTNGLVNVRDALRACAFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGRE
IDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAAS
LYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSAN
RGNEYAYVRLAWGHRDGVFTGGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP

Sequences:

>Translated_716_residues
MLRRSFSSYLRQGLLLAFLAAFSALWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLIANTLTELKFDVLLFYDVKKS
AEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVDTRISSAKEVAADAMRLNDLIDIVKNDPVGVKVFILDACRN
NPVAKEKGLQQGLAYTEAGSGQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATGGSQI
PWITGSIETKFVFRQGDAGKQVAQAEHAAEADGGLTIDEVLWSFISDSQNPEDFERFVKVFPNSRYAAEATEKSRFKVAA
LTKRGLYVNGNLVSSSIAATAPIGASDKALSEEFVFQQAGERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQ
RAVPGVTNGLVNVRDALRACAFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGRE
IDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAAS
LYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSAN
RGNEYAYVRLAWGHRDGVFTGGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP
>Mature_716_residues
MLRRSFSSYLRQGLLLAFLAAFSALWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLIANTLTELKFDVLLFYDVKKS
AEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVDTRISSAKEVAADAMRLNDLIDIVKNDPVGVKVFILDACRN
NPVAKEKGLQQGLAYTEAGSGQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATGGSQI
PWITGSIETKFVFRQGDAGKQVAQAEHAAEADGGLTIDEVLWSFISDSQNPEDFERFVKVFPNSRYAAEATEKSRFKVAA
LTKRGLYVNGNLVSSSIAATAPIGASDKALSEEFVFQQAGERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQ
RAVPGVTNGLVNVRDALRACAFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGRE
IDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAAS
LYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSAN
RGNEYAYVRLAWGHRDGVFTGGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=210, Percent_Identity=28.0952380952381, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI87081769, Length=182, Percent_Identity=34.6153846153846, Blast_Score=93, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17563256, Length=174, Percent_Identity=31.6091954022989, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355295, Length=192, Percent_Identity=26.0416666666667, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 78138; Mature: 78138

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRSFSSYLRQGLLLAFLAAFSALWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHH
ANTLTELKFDVLLFYDVKKSAEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVD
HHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCHHEEEHEECCEEEECCCEEEEECC
TRISSAKEVAADAMRLNDLIDIVKNDPVGVKVFILDACRNNPVAKEKGLQQGLAYTEAGS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEECCC
GQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATGGSQI
CCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
PWITGSIETKFVFRQGDAGKQVAQAEHAAEADGGLTIDEVLWSFISDSQNPEDFERFVKV
CEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
FPNSRYAAEATEKSRFKVAALTKRGLYVNGNLVSSSIAATAPIGASDKALSEEFVFQQAG
CCCCCCCHHHHHHCCEEEEEEEECCEEEECCEECCCHHHCCCCCCCCHHHHHHHHHHHHH
ERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQRAVPGVTNGLVNVRDALRAC
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCCHHHCCCHHCCHHHHHHHHHHH
AFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGRE
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCC
IDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITA
CCCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH
LGDAYRLGTGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQR
HCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH
ANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSANRGNEYAYVRLAWGHRDGVFT
HHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECCCCCEEEEEEEEECCCCCCCC
GGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEEECCCC
>Mature Secondary Structure
MLRRSFSSYLRQGLLLAFLAAFSALWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHH
ANTLTELKFDVLLFYDVKKSAEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVD
HHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCHHEEEHEECCEEEECCCEEEEECC
TRISSAKEVAADAMRLNDLIDIVKNDPVGVKVFILDACRNNPVAKEKGLQQGLAYTEAGS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEECCC
GQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATGGSQI
CCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
PWITGSIETKFVFRQGDAGKQVAQAEHAAEADGGLTIDEVLWSFISDSQNPEDFERFVKV
CEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
FPNSRYAAEATEKSRFKVAALTKRGLYVNGNLVSSSIAATAPIGASDKALSEEFVFQQAG
CCCCCCCHHHHHHCCEEEEEEEECCEEEECCEECCCHHHCCCCCCCCHHHHHHHHHHHHH
ERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQRAVPGVTNGLVNVRDALRAC
HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCCHHHCCCHHCCHHHHHHHHHHH
AFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGRE
HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCC
IDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITA
CCCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHH
LGDAYRLGTGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQR
HCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHH
ANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSANRGNEYAYVRLAWGHRDGVFT
HHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECCCCCEEEEEEEEECCCCCCCC
GGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]