| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471696
Identifier: 13471696
GI number: 13471696
Start: 1459746
End: 1460003
Strand: Direct
Name: 13471696
Synonym: msr1747
Alternate gene names: NA
Gene position: 1459746-1460003 (Clockwise)
Preceding gene: 13471681
Following gene: 13471697
Centisome position: 20.75
GC content: 63.18
Gene sequence:
>258_bases ATGTCCCAATCAACGCAGCATAAGAATCCCAAACTGATCGTCGTGGTCGCGTTCGACCGCGGCGAGGACGGTGAATTGTT TCCCGCCTTCGGCCCCGCCGACCAGCAGAGCGAAGACCGCGCCATACGCACCGCCCGAGCTCTGGCGGCAAAACACGTCG GCGTCATCGCCTGGAGTCGTGATGCCGACCCGACACTTGGCGACTATGGCCCGCCGACCACGCTGTTTGTTAGCGGCGAC GTGCCCGACATGGAGTAG
Upstream 100 bases:
>100_bases ATACATGCCCATATACGTCCTGTCAATATGATGCCACCACAGGTCAAACAGGCCGCCCTTGTTCCCGGTAGTGTGGTAGG TTCCGCGTCGAAGGAGCAAC
Downstream 100 bases:
>100_bases CGGCGACGCCCTCTGTAGGCTCGGTAAAATAAAATCTGGTTTTAATATTTACCGATGGAGAGGAACCGTTTTCTCTCGAT TCCGTTTATCTACAGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSQSTQHKNPKLIVVVAFDRGEDGELFPAFGPADQQSEDRAIRTARALAAKHVGVIAWSRDADPTLGDYGPPTTLFVSGD VPDME
Sequences:
>Translated_85_residues MSQSTQHKNPKLIVVVAFDRGEDGELFPAFGPADQQSEDRAIRTARALAAKHVGVIAWSRDADPTLGDYGPPTTLFVSGD VPDME >Mature_84_residues SQSTQHKNPKLIVVVAFDRGEDGELFPAFGPADQQSEDRAIRTARALAAKHVGVIAWSRDADPTLGDYGPPTTLFVSGDV PDME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9167; Mature: 9036
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSTQHKNPKLIVVVAFDRGEDGELFPAFGPADQQSEDRAIRTARALAAKHVGVIAWSR CCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC DADPTLGDYGPPTTLFVSGDVPDME CCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure SQSTQHKNPKLIVVVAFDRGEDGELFPAFGPADQQSEDRAIRTARALAAKHVGVIAWSR CCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC DADPTLGDYGPPTTLFVSGDVPDME CCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA