| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yegV [H]
Identifier: 13471693
GI number: 13471693
Start: 1456870
End: 1457847
Strand: Reverse
Name: yegV [H]
Synonym: mll1743
Alternate gene names: 13471693
Gene position: 1457847-1456870 (Counterclockwise)
Preceding gene: 13471694
Following gene: 13471692
Centisome position: 20.72
GC content: 67.28
Gene sequence:
>978_bases ATGAGCGCGCGCCTCGTCCATATCGGCAGCGCGGTGGTGGACTACGTCTACCGCATCGACGCCTTGCCGGCGCCGGGTAC CGAGAAGACGGCATCGAGCTTTGCCCAGGTCGCCGGCGGCGGCTTCAACATGATGGTCGCGGCCAGCCGCACCGGCATGA CGGTGGTGTTCGGCGGCCAGCTCGGCAGCGGGCCGAACGGCGATTTCCTGCGCGCCGCCTTCGCCGCGGAGGGCATCGAG ACGCTGACGCCGCCATCGCCCGCGATGGACAGCGGCAATTGCGTTGCCATGATCTCGAGCGATGCCGAACGCACTTTCGT CTCGTGGCCGGGTGCGGAGAGCATTCTCACCCTCGACATGATGGCGGCGCTATCGGTAGCGCCCGATGATTGGGTGTTCA CCTCGGGCTATACGCTGAGCTATGCGGGCAGCCGCGACGCGCTCGCAGACTGGATCGAGGCGCTGCCTGCGCAAACGCCG TTCGTCTTTGACCCGACGCCGATTATTTCAGACATTCCGCGCCCGATCCTGTCGCGGGTGCTTGCCCGCGCCACATGGCT CAGCTGCAACGCGACGGAAGCGGCCGAGATTGCCGGCCCAGGTGATGTCGAGGCTTTGGCGGCGCGGCTTCTTGACGACC ATTGTCCGCAGGCAACCGGTGTCGTCATCCGCTCGGCGGCCAAGGGCTGCCATGTCAGGCTGGCCGACGGCACGGCACAG ACCATTCCCGGCTTCAAGGTCTCGGCAGTCGACACCAATGGCGCCGGCGACACCCATATCGGCGCTTTCGTCAGTGCGCT GGCGCGCGGCGTGCATCCCTTCGAGGCGGGGCGTTACGCCAATGCGGCGGCGGCCATTTCGGTCACCCGCCATGGCGGCT CATCGGCGCCGACCGATGCGGAAATCCAGACTTTCCTGAGCCAGGCCGCCGCGACCGGCACGCCGGGCCAGAACCAGAAG GCCCATCAGACAGCCTGA
Upstream 100 bases:
>100_bases CCCGGCTTGTCGGCATCGACATGTCAAAGGTGCGCGCGCTTGCTGCCGATCTCGTGGCGGCAAGGGTGAAGAAGACCGGT TCCGGCAAGGATGCGGCGGC
Downstream 100 bases:
>100_bases CAAGCCCCGCCAAGCGGGCAAACAAAGAGAGGAACCGACATGCGCATGCCAAGACTGACTGCTCTCTTGACGGCGACCGC CGTCTTCACCACCGCACTCA
Product: ribokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSARLVHIGSAVVDYVYRIDALPAPGTEKTASSFAQVAGGGFNMMVAASRTGMTVVFGGQLGSGPNGDFLRAAFAAEGIE TLTPPSPAMDSGNCVAMISSDAERTFVSWPGAESILTLDMMAALSVAPDDWVFTSGYTLSYAGSRDALADWIEALPAQTP FVFDPTPIISDIPRPILSRVLARATWLSCNATEAAEIAGPGDVEALAARLLDDHCPQATGVVIRSAAKGCHVRLADGTAQ TIPGFKVSAVDTNGAGDTHIGAFVSALARGVHPFEAGRYANAAAAISVTRHGGSSAPTDAEIQTFLSQAAATGTPGQNQK AHQTA
Sequences:
>Translated_325_residues MSARLVHIGSAVVDYVYRIDALPAPGTEKTASSFAQVAGGGFNMMVAASRTGMTVVFGGQLGSGPNGDFLRAAFAAEGIE TLTPPSPAMDSGNCVAMISSDAERTFVSWPGAESILTLDMMAALSVAPDDWVFTSGYTLSYAGSRDALADWIEALPAQTP FVFDPTPIISDIPRPILSRVLARATWLSCNATEAAEIAGPGDVEALAARLLDDHCPQATGVVIRSAAKGCHVRLADGTAQ TIPGFKVSAVDTNGAGDTHIGAFVSALARGVHPFEAGRYANAAAAISVTRHGGSSAPTDAEIQTFLSQAAATGTPGQNQK AHQTA >Mature_324_residues SARLVHIGSAVVDYVYRIDALPAPGTEKTASSFAQVAGGGFNMMVAASRTGMTVVFGGQLGSGPNGDFLRAAFAAEGIET LTPPSPAMDSGNCVAMISSDAERTFVSWPGAESILTLDMMAALSVAPDDWVFTSGYTLSYAGSRDALADWIEALPAQTPF VFDPTPIISDIPRPILSRVLARATWLSCNATEAAEIAGPGDVEALAARLLDDHCPQATGVVIRSAAKGCHVRLADGTAQT IPGFKVSAVDTNGAGDTHIGAFVSALARGVHPFEAGRYANAAAAISVTRHGGSSAPTDAEIQTFLSQAAATGTPGQNQKA HQTA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1788417, Length=301, Percent_Identity=31.5614617940199, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082343, Length=307, Percent_Identity=26.7100977198697, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1790193, Length=315, Percent_Identity=31.7460317460317, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 33365; Mature: 33233
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLVHIGSAVVDYVYRIDALPAPGTEKTASSFAQVAGGGFNMMVAASRTGMTVVFGGQ CCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC LGSGPNGDFLRAAFAAEGIETLTPPSPAMDSGNCVAMISSDAERTFVSWPGAESILTLDM CCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHH MAALSVAPDDWVFTSGYTLSYAGSRDALADWIEALPAQTPFVFDPTPIISDIPRPILSRV HHHHHCCCCCEEEECCEEEEECCCHHHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHHHH LARATWLSCNATEAAEIAGPGDVEALAARLLDDHCPQATGVVIRSAAKGCHVRLADGTAQ HHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHH TIPGFKVSAVDTNGAGDTHIGAFVSALARGVHPFEAGRYANAAAAISVTRHGGSSAPTDA CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEECCCCCCCCHH EIQTFLSQAAATGTPGQNQKAHQTA HHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SARLVHIGSAVVDYVYRIDALPAPGTEKTASSFAQVAGGGFNMMVAASRTGMTVVFGGQ CCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC LGSGPNGDFLRAAFAAEGIETLTPPSPAMDSGNCVAMISSDAERTFVSWPGAESILTLDM CCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHH MAALSVAPDDWVFTSGYTLSYAGSRDALADWIEALPAQTPFVFDPTPIISDIPRPILSRV HHHHHCCCCCEEEECCEEEEECCCHHHHHHHHHHCCCCCCEEECCCCHHHHCCHHHHHHH LARATWLSCNATEAAEIAGPGDVEALAARLLDDHCPQATGVVIRSAAKGCHVRLADGTAQ HHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHH TIPGFKVSAVDTNGAGDTHIGAFVSALARGVHPFEAGRYANAAAAISVTRHGGSSAPTDA CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEECCCCCCCCHH EIQTFLSQAAATGTPGQNQKAHQTA HHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]