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The map label for this gene is ndoA [H]

Identifier: 13471683

GI number: 13471683

Start: 1447587

End: 1447898

Strand: Reverse

Name: ndoA [H]

Synonym: mll1732

Alternate gene names: 13471683

Gene position: 1447898-1447587 (Counterclockwise)

Preceding gene: 13471684

Following gene: 13471682

Centisome position: 20.58

GC content: 58.65

Gene sequence:

>312_bases
ATGGCCGATTGGGTTGAAGCGTGCGCGGTGGATGATGTCGAAGAAGAGGATGTCATCCGCTTCGACCATGGCGGCCGCAC
CTTCGCGATCTACCGCTCGCCCGATGACGAGTTCTTCGCCACCGACGGCTATTGCACGCATGAGAAGGCGCATCTGGCCG
ACGGGCTGGTGATGGACGACATTATCGAATGCCCGAAGCACAATGGCCGCTTCAACTACAAGACAGGTGCCGCCAAGGGC
GCGCCGGTCTGCGTCAATCTCGTGACCTATCCGGTAAAGATCGAGGCCGGTAAGGTGATGATCCAGATTTGA

Upstream 100 bases:

>100_bases
GCGAACTGCCGCCGACGGCCAGGCCCTATCGCGGCGAGTTTCACGAGGTCGATATGTCGGCGGCCGAATAGCGATCGCGA
ATTTTTTGCAGGAGACCGAG

Downstream 100 bases:

>100_bases
CGCGCGGCAACCGATCCAGCATCACAAAGGGGACGTTTTAATGAGCCGAAAGAGACCGACCGTCGCCGATCTGCGCGCGA
TGAAGGGCAAGCGCCAGCTG

Product: naphthalene dioxygenase ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MADWVEACAVDDVEEEDVIRFDHGGRTFAIYRSPDDEFFATDGYCTHEKAHLADGLVMDDIIECPKHNGRFNYKTGAAKG
APVCVNLVTYPVKIEAGKVMIQI

Sequences:

>Translated_103_residues
MADWVEACAVDDVEEEDVIRFDHGGRTFAIYRSPDDEFFATDGYCTHEKAHLADGLVMDDIIECPKHNGRFNYKTGAAKG
APVCVNLVTYPVKIEAGKVMIQI
>Mature_102_residues
ADWVEACAVDDVEEEDVIRFDHGGRTFAIYRSPDDEFFATDGYCTHEKAHLADGLVMDDIIECPKHNGRFNYKTGAAKGA
PVCVNLVTYPVKIEAGKVMIQI

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=102, Percent_Identity=35.2941176470588, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11453; Mature: 11322

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADWVEACAVDDVEEEDVIRFDHGGRTFAIYRSPDDEFFATDGYCTHEKAHLADGLVMDD
CCCHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEECCCCCHHHCCCCHHH
IIECPKHNGRFNYKTGAAKGAPVCVNLVTYPVKIEAGKVMIQI
HHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEC
>Mature Secondary Structure 
ADWVEACAVDDVEEEDVIRFDHGGRTFAIYRSPDDEFFATDGYCTHEKAHLADGLVMDD
CCHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCEECCCCCHHHCCCCHHH
IIECPKHNGRFNYKTGAAKGAPVCVNLVTYPVKIEAGKVMIQI
HHHCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA